RNA–Protein interactions for RNA: ENST00000341472.9

SYNE2-201, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 1,132 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-201ENST00000341472 LOC101927531A0A1B0GV80 90 aa9.51□□□□□ -0.89
SYNE2-201ENST00000341472 H3BPC8 53 aa9.51□□□□□ -0.89
SYNE2-201ENST00000341472 KRTAP4-6Q9BYQ5 205 aa9.51□□□□□ -0.89
SYNE2-201ENST00000341472 SERP2Q8N6R1 65 aa9.5□□□□□ -0.89
SYNE2-201ENST00000341472 C1orf64Q8NEQ6 169 aa9.47□□□□□ -0.89
SYNE2-201ENST00000341472 LINC00208Q96KT6 92 aa9.47□□□□□ -0.89
SYNE2-201ENST00000341472 CYP4F30PQ9H0H9 118 aa9.44□□□□□ -0.9
SYNE2-201ENST00000341472 KRTAP19-6Q3LI70 58 aa9.41□□□□□ -0.9
SYNE2-201ENST00000341472 ANAPC13Q9BS18 74 aa9.4□□□□□ -0.9
SYNE2-201ENST00000341472 COX7CP15954 63 aa9.38□□□□□ -0.91
SYNE2-201ENST00000341472 KRTAP3-1Q9BYR8 98 aa9.36□□□□□ -0.91
SYNE2-201ENST00000341472 MACF1Q9UPN3 7388 aaKnown RBP9.36□□□□□ -0.91
SYNE2-201ENST00000341472 C20orf197Q8N268 126 aa9.33□□□□□ -0.92
SYNE2-201ENST00000341472 S4R3F8 94 aa9.3□□□□□ -0.92
SYNE2-201ENST00000341472 CSAG1Q6PB30 78 aa9.29□□□□□ -0.92
SYNE2-201ENST00000341472 SYNE2Q8WXH0 6885 aaKnown RBP9.29□□□□□ -0.92
SYNE2-201ENST00000341472 KLKP1Q107X0 134 aa9.27□□□□□ -0.93
SYNE2-201ENST00000341472 SNURFQ9Y675 71 aa9.27□□□□□ -0.93
SYNE2-201ENST00000341472 LCA10Q71F78 164 aa9.22□□□□□ -0.93
SYNE2-201ENST00000341472 NDUFC1O43677 76 aa9.19□□□□□ -0.94
SYNE2-201ENST00000341472 A8MUN3 132 aa9.14□□□□□ -0.95
SYNE2-201ENST00000341472 CCDC179H3BU77 68 aa9.14□□□□□ -0.95
SYNE2-201ENST00000341472 SPANXA2-OT1Q8N9U9 137 aa9.12□□□□□ -0.95
SYNE2-201ENST00000341472 SPRR2GQ9BYE4 73 aa9.08□□□□□ -0.96
SYNE2-201ENST00000341472 H7BZZ5 65 aa9.07□□□□□ -0.96
SYNE2-201ENST00000341472 Q5VV11 94 aa9.06□□□□□ -0.96
SYNE2-201ENST00000341472 DMAC1Q96GE9 116 aa9.06□□□□□ -0.96
SYNE2-201ENST00000341472 CYSTM1Q9H1C7 97 aa9.04□□□□□ -0.96
SYNE2-201ENST00000341472 MT1BP07438 61 aa9.03□□□□□ -0.96
SYNE2-201ENST00000341472 KRTAP19-8Q3LI54 63 aa9.03□□□□□ -0.96
SYNE2-201ENST00000341472 ACYP2P14621 99 aa9.01□□□□□ -0.97
SYNE2-201ENST00000341472 KRTAP6-3Q3LI67 103 aa9.01□□□□□ -0.97
SYNE2-201ENST00000341472 A6NN06 94 aa8.99□□□□□ -0.97
SYNE2-201ENST00000341472 PCP4P48539 62 aa8.98□□□□□ -0.97
SYNE2-201ENST00000341472 CRIPTQ9P021 101 aa8.94□□□□□ -0.98
SYNE2-201ENST00000341472 ATP5EP56381 51 aaPredicted RBP8.91□□□□□ -0.98
SYNE2-201ENST00000341472 TMEM258P61165 79 aa8.89□□□□□ -0.99
SYNE2-201ENST00000341472 KRTAP10-5P60370 271 aa8.86□□□□□ -0.99
SYNE2-201ENST00000341472 CHKB-CPT1BH3BT56 60 aa8.84□□□□□ -0.99
SYNE2-201ENST00000341472 H0YAA0 97 aa8.83□□□□□ -1
SYNE2-201ENST00000341472 SPTSSBQ8NFR3 76 aa8.81□□□□□ -1
SYNE2-201ENST00000341472 COA5Q86WW8 74 aa8.79□□□□□ -1
SYNE2-201ENST00000341472 NEBP20929 6669 aa8.78□□□□□ -1
SYNE2-201ENST00000341472 ADM2Q7Z4H4 148 aa8.76□□□□□ -1.01
SYNE2-201ENST00000341472 KRTAP4-8Q9BYQ9 185 aa8.67□□□□□ -1.02
SYNE2-201ENST00000341472 MUC12Q9UKN1 5478 aa8.65□□□□□ -1.02
SYNE2-201ENST00000341472 SERP1Q9Y6X1 66 aa8.62□□□□□ -1.03
SYNE2-201ENST00000341472 PLAC4Q8WY50 150 aa8.55□□□□□ -1.04
SYNE2-201ENST00000341472 R4GN34 69 aa8.54□□□□□ -1.04
SYNE2-201ENST00000341472 P0C880 135 aa8.53□□□□□ -1.04
SYNE2-201ENST00000341472 KRTAP5-9P26371 169 aa8.53□□□□□ -1.04
SYNE2-201ENST00000341472 PRO2289Q9P1D8 64 aa8.53□□□□□ -1.04
SYNE2-201ENST00000341472 KMT2DO14686 5537 aa8.51□□□□□ -1.05
SYNE2-201ENST00000341472 M0QZ58 72 aa8.46□□□□□ -1.06
SYNE2-201ENST00000341472 SEC61GP60059 68 aa8.46□□□□□ -1.06
SYNE2-201ENST00000341472 RPS28P62857 69 aaKnown RBP8.46□□□□□ -1.06
SYNE2-201ENST00000341472 MT1XP80297 61 aa8.45□□□□□ -1.06
SYNE2-201ENST00000341472 MDN1Q9NU22 5596 aa8.44□□□□□ -1.06
SYNE2-201ENST00000341472 KRTAP20-1Q3LI63 56 aa8.36□□□□□ -1.07
SYNE2-201ENST00000341472 LINC01554Q52M75 96 aa8.36□□□□□ -1.07
SYNE2-201ENST00000341472 LINC01558Q9Y6Z2 57 aa8.36□□□□□ -1.07
SYNE2-201ENST00000341472 SMIM26A0A096LP01 95 aa8.35□□□□□ -1.07
SYNE2-201ENST00000341472 A0A1B0GU69 56 aa8.35□□□□□ -1.07
SYNE2-201ENST00000341472 PRR15LQ9BU68 103 aa8.33□□□□□ -1.08
SYNE2-201ENST00000341472 V9GYY9 64 aa8.33□□□□□ -1.08
SYNE2-201ENST00000341472 SPRR2FQ96RM1 72 aa8.29□□□□□ -1.08
SYNE2-201ENST00000341472 KRTAP12-2P59991 146 aa8.27□□□□□ -1.09
SYNE2-201ENST00000341472 Q1T7F1 81 aa8.26□□□□□ -1.09
SYNE2-201ENST00000341472 LCE3BQ5TA77 95 aa8.26□□□□□ -1.09
SYNE2-201ENST00000341472 KRTAP8-1Q8IUC2 63 aa8.25□□□□□ -1.09
SYNE2-201ENST00000341472 KRTAP4-12Q9BQ66 201 aa8.23□□□□□ -1.09
SYNE2-201ENST00000341472 A0A1B0GU33 70 aa8.22□□□□□ -1.09
SYNE2-201ENST00000341472 SPRR2EP22531 72 aa8.18□□□□□ -1.1
SYNE2-201ENST00000341472 SPRR2BP35325 72 aa8.18□□□□□ -1.1
SYNE2-201ENST00000341472 SPRR2AP35326 72 aa8.18□□□□□ -1.1
SYNE2-201ENST00000341472 KRTAP2-3P0C7H8 128 aa8.15□□□□□ -1.1
SYNE2-201ENST00000341472 KRTAP2-4Q9BYR9 128 aa8.15□□□□□ -1.1
SYNE2-201ENST00000341472 KRTAP4-8A0A0G2JLE6 195 aa8.13□□□□□ -1.11
SYNE2-201ENST00000341472 KRTAP9-9Q9BYP9 154 aa8.1□□□□□ -1.11
SYNE2-201ENST00000341472 KRTAP9-4Q9BYQ2 154 aa8.1□□□□□ -1.11
SYNE2-201ENST00000341472 PSPHP1O15172 72 aa8.09□□□□□ -1.11
SYNE2-201ENST00000341472 KRTAP10-7P60409 375 aaPredicted RBP8.07□□□□□ -1.12
SYNE2-201ENST00000341472 KRTAP13-4Q3LI77 160 aa8.07□□□□□ -1.12
SYNE2-201ENST00000341472 LCE1AQ5T7P2 110 aa8.07□□□□□ -1.12
SYNE2-201ENST00000341472 UQCR11O14957 56 aa8.05□□□□□ -1.12
SYNE2-201ENST00000341472 KRTAP10-12P60413 245 aa8.03□□□□□ -1.12
SYNE2-201ENST00000341472 SPATA8Q6RVD6 105 aa8.03□□□□□ -1.12
SYNE2-201ENST00000341472 A0A0D9SG42 100 aa7.92□□□□□ -1.14
SYNE2-201ENST00000341472 SPRR2DP22532 72 aa7.91□□□□□ -1.14
SYNE2-201ENST00000341472 MIR22HGQ0VDD5 57 aa7.9□□□□□ -1.14
SYNE2-201ENST00000341472 A6NED7 52 aa7.89□□□□□ -1.15
SYNE2-201ENST00000341472 KRTAP2-2Q9BYT5 123 aa7.89□□□□□ -1.15
SYNE2-201ENST00000341472 KRTAP2-1Q9BYU5 128 aa7.89□□□□□ -1.15
SYNE2-201ENST00000341472 CAMK2N1Q7Z7J9 78 aa7.87□□□□□ -1.15
SYNE2-201ENST00000341472 A8MU10 97 aa7.85□□□□□ -1.15
SYNE2-201ENST00000341472 KRTAP12-1P59990 96 aa7.79□□□□□ -1.16
SYNE2-201ENST00000341472 SPINT4Q6UDR6 99 aa7.79□□□□□ -1.16
SYNE2-201ENST00000341472 KRTAP4-7Q9BYR0 210 aa7.73□□□□□ -1.17
SYNE2-201ENST00000341472 LCE1DQ5T752 114 aa7.7□□□□□ -1.18
SYNE2-201ENST00000341472 CDC42SE1Q9NRR8 79 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 169.8 ms