RNA–Protein interactions for RNA: ENST00000338546.9

HPS1-202, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

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Gene HPS1, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-202ENST00000338546 LRP2P98164 4655 aa8.34□□□□□ -1.07
HPS1-202ENST00000338546 Q5VV11 94 aa8.32□□□□□ -1.08
HPS1-202ENST00000338546 LPAP08519 4548 aa8.3□□□□□ -1.08
HPS1-202ENST00000338546 RBM12B-AS1Q9P1G2 102 aa8.26□□□□□ -1.09
HPS1-202ENST00000338546 A0A1B0GU69 56 aa8.24□□□□□ -1.09
HPS1-202ENST00000338546 H1FX-AS1Q4G0G2 97 aa8.22□□□□□ -1.09
HPS1-202ENST00000338546 MUC17Q685J3 4493 aa8.2□□□□□ -1.1
HPS1-202ENST00000338546 SEC61GP60059 68 aa8.18□□□□□ -1.1
HPS1-202ENST00000338546 S4R3F8 94 aa8.18□□□□□ -1.1
HPS1-202ENST00000338546 LORP23490 312 aaPredicted RBP8.16□□□□□ -1.1
HPS1-202ENST00000338546 BRK1Q8WUW1 75 aa8.15□□□□□ -1.1
HPS1-202ENST00000338546 A6NED7 52 aa8.14□□□□□ -1.11
HPS1-202ENST00000338546 LCA10Q71F78 164 aa8.14□□□□□ -1.11
HPS1-202ENST00000338546 PRO0628Q9UI54 55 aa8.13□□□□□ -1.11
HPS1-202ENST00000338546 HERC1Q15751 4861 aa8.12□□□□□ -1.11
HPS1-202ENST00000338546 HMCN2Q8NDA2 5059 aa8.07□□□□□ -1.12
HPS1-202ENST00000338546 KRTAP4-1Q9BYQ7 146 aa8.06□□□□□ -1.12
HPS1-202ENST00000338546 CDC42SE1Q9NRR8 79 aa8.06□□□□□ -1.12
HPS1-202ENST00000338546 UQCR11O14957 56 aa8.05□□□□□ -1.12
HPS1-202ENST00000338546 LOC100996750A0A140TA64 210 aa8.02□□□□□ -1.13
HPS1-202ENST00000338546 KRTAP4-6Q9BYQ5 205 aa8.02□□□□□ -1.13
HPS1-202ENST00000338546 CSAG1Q6PB30 78 aa8.01□□□□□ -1.13
HPS1-202ENST00000338546 SPATA8Q6RVD6 105 aa7.99□□□□□ -1.13
HPS1-202ENST00000338546 A0A1B0GU33 70 aa7.95□□□□□ -1.14
HPS1-202ENST00000338546 MIR22HGQ0VDD5 57 aa7.95□□□□□ -1.14
HPS1-202ENST00000338546 KRTAP19-2Q3LHN2 52 aa7.93□□□□□ -1.14
HPS1-202ENST00000338546 A8MU10 97 aa7.9□□□□□ -1.14
HPS1-202ENST00000338546 H0YAA0 97 aa7.89□□□□□ -1.15
HPS1-202ENST00000338546 KRTAP10-6P60371 365 aaPredicted RBP7.89□□□□□ -1.15
HPS1-202ENST00000338546 UBR4Q5T4S7 5183 aa7.84□□□□□ -1.15
HPS1-202ENST00000338546 SVIPQ8NHG7 77 aa7.84□□□□□ -1.15
HPS1-202ENST00000338546 ADM2Q7Z4H4 148 aa7.81□□□□□ -1.16
HPS1-202ENST00000338546 FLGP20930 4061 aaPredicted RBP7.79□□□□□ -1.16
HPS1-202ENST00000338546 P0C880 135 aa7.76□□□□□ -1.17
HPS1-202ENST00000338546 PMAIP1Q13794 54 aa7.74□□□□□ -1.17
HPS1-202ENST00000338546 MUC2Q02817 5179 aa7.72□□□□□ -1.17
HPS1-202ENST00000338546 M0QZ58 72 aa7.7□□□□□ -1.18
HPS1-202ENST00000338546 A6NN06 94 aa7.68□□□□□ -1.18
HPS1-202ENST00000338546 KRTAP13-4Q3LI77 160 aa7.65□□□□□ -1.18
HPS1-202ENST00000338546 RNF213Q63HN8 5207 aa7.64□□□□□ -1.19
HPS1-202ENST00000338546 K7ERS5 55 aa7.61□□□□□ -1.19
HPS1-202ENST00000338546 R4GN34 69 aa7.54□□□□□ -1.2
HPS1-202ENST00000338546 A0A0D9SG42 100 aa7.51□□□□□ -1.21
HPS1-202ENST00000338546 CRIPTQ9P021 101 aa7.51□□□□□ -1.21
HPS1-202ENST00000338546 MT1HP80294 61 aa7.5□□□□□ -1.21
HPS1-202ENST00000338546 KTN1-AS1Q86SY8 53 aa7.49□□□□□ -1.21
HPS1-202ENST00000338546 M0R2T5 61 aa7.44□□□□□ -1.22
HPS1-202ENST00000338546 FAT4Q6V0I7 4981 aa7.43□□□□□ -1.22
HPS1-202ENST00000338546 KRTAP12-1P59990 96 aa7.42□□□□□ -1.22
HPS1-202ENST00000338546 KRTAP12-2P59991 146 aa7.37□□□□□ -1.23
HPS1-202ENST00000338546 SPINT4Q6UDR6 99 aa7.36□□□□□ -1.23
HPS1-202ENST00000338546 LINC01554Q52M75 96 aa7.34□□□□□ -1.23
HPS1-202ENST00000338546 KRTAP4-8Q9BYQ9 185 aa7.34□□□□□ -1.23
HPS1-202ENST00000338546 ROMO1P60602 79 aa7.29□□□□□ -1.24
HPS1-202ENST00000338546 KRTAP9-2Q9BYQ4 174 aa7.28□□□□□ -1.24
HPS1-202ENST00000338546 KRTAP9-8Q9BYQ0 159 aa7.26□□□□□ -1.25
HPS1-202ENST00000338546 MT2AP02795 61 aa7.25□□□□□ -1.25
HPS1-202ENST00000338546 SPRR2GQ9BYE4 73 aa7.25□□□□□ -1.25
HPS1-202ENST00000338546 KRTAP9-6A0A140TA67 174 aa7.21□□□□□ -1.25
HPS1-202ENST00000338546 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.21□□□□□ -1.25
HPS1-202ENST00000338546 KRTAP10-10P60014 251 aa7.2□□□□□ -1.26
HPS1-202ENST00000338546 MT1FP04733 61 aa7.19□□□□□ -1.26
HPS1-202ENST00000338546 KRTAP19-1Q8IUB9 90 aa7.16□□□□□ -1.26
HPS1-202ENST00000338546 PRAC1Q96KF2 57 aa7.16□□□□□ -1.26
HPS1-202ENST00000338546 CAMK2N1Q7Z7J9 78 aa7.08□□□□□ -1.28
HPS1-202ENST00000338546 KRTAP25-1Q3LHN0 102 aa7.04□□□□□ -1.28
HPS1-202ENST00000338546 PLAC4Q8WY50 150 aa7.04□□□□□ -1.28
HPS1-202ENST00000338546 KRTAP19-8Q3LI54 63 aa7.03□□□□□ -1.28
HPS1-202ENST00000338546 LCE3BQ5TA77 95 aa7.02□□□□□ -1.29
HPS1-202ENST00000338546 KRTAP9-3Q9BYQ3 159 aa7□□□□□ -1.29
HPS1-202ENST00000338546 C10orf95Q9H7T3 257 aa7□□□□□ -1.29
HPS1-202ENST00000338546 KRTAP4-12Q9BQ66 201 aa6.99□□□□□ -1.29
HPS1-202ENST00000338546 MT1BP07438 61 aa6.86□□□□□ -1.31
HPS1-202ENST00000338546 KRTAP9-9Q9BYP9 154 aa6.86□□□□□ -1.31
HPS1-202ENST00000338546 KRTAP9-4Q9BYQ2 154 aa6.86□□□□□ -1.31
HPS1-202ENST00000338546 CRCT1Q9UGL9 99 aa6.81□□□□□ -1.32
HPS1-202ENST00000338546 TNP1P09430 55 aa6.8□□□□□ -1.32
HPS1-202ENST00000338546 KRTAP4-8A0A0G2JLE6 195 aa6.76□□□□□ -1.33
HPS1-202ENST00000338546 PP632Q6XCG6 107 aa6.76□□□□□ -1.33
HPS1-202ENST00000338546 KRTAP23-1A1A580 65 aa6.74□□□□□ -1.33
HPS1-202ENST00000338546 MT1XP80297 61 aa6.69□□□□□ -1.34
HPS1-202ENST00000338546 KRTAP10-5P60370 271 aa6.68□□□□□ -1.34
HPS1-202ENST00000338546 PRO2289Q9P1D8 64 aa6.67□□□□□ -1.34
HPS1-202ENST00000338546 FSIP2Q5CZC0 6907 aa6.65□□□□□ -1.34
HPS1-202ENST00000338546 LCE1DQ5T752 114 aa6.54□□□□□ -1.36
HPS1-202ENST00000338546 KRTAP4-7Q9BYR0 210 aa6.53□□□□□ -1.36
HPS1-202ENST00000338546 USH2AO75445 5202 aa6.5□□□□□ -1.37
HPS1-202ENST00000338546 KRTAP9-7A8MTY7 169 aa6.44□□□□□ -1.38
HPS1-202ENST00000338546 KRTAP10-12P60413 245 aa6.41□□□□□ -1.38
HPS1-202ENST00000338546 LCE3AQ5TA76 89 aa6.41□□□□□ -1.38
HPS1-202ENST00000338546 KRTAP10-7P60409 375 aaPredicted RBP6.4□□□□□ -1.39
HPS1-202ENST00000338546 KRTAP8-1Q8IUC2 63 aa6.37□□□□□ -1.39
HPS1-202ENST00000338546 KRTAP4-9Q9BYQ8 210 aa6.36□□□□□ -1.39
HPS1-202ENST00000338546 KRTAP19-6Q3LI70 58 aa6.35□□□□□ -1.39
HPS1-202ENST00000338546 SSPOA2VEC9 5147 aa6.29□□□□□ -1.4
HPS1-202ENST00000338546 KRTAP15-1Q3LI76 137 aa6.27□□□□□ -1.41
HPS1-202ENST00000338546 LCE4AQ5TA78 99 aa6.25□□□□□ -1.41
HPS1-202ENST00000338546 KRTAP4-2Q9BYR5 136 aa6.25□□□□□ -1.41
HPS1-202ENST00000338546 KRTAP12-3P60328 96 aa6.19□□□□□ -1.42
HPS1-202ENST00000338546 KRTAP4-11Q9BYQ6 195 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 147.1 ms