RNA–Protein interactions for RNA: ENST00000334475.10

TREM1-202, Transcript of triggering receptor expressed on myeloid cells 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TREM1, Length 1,043 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREM1-202ENST00000334475 PRR26Q8N8Z3 221 aa5.06□□□□□ -1.6
TREM1-202ENST00000334475 Q5W150 140 aa5.05□□□□□ -1.6
TREM1-202ENST00000334475 LRP2P98164 4655 aa5.02□□□□□ -1.61
TREM1-202ENST00000334475 RNF213Q63HN8 5207 aa5.02□□□□□ -1.61
TREM1-202ENST00000334475 IGKV2-30P06310 120 aa5.02□□□□□ -1.61
TREM1-202ENST00000334475 COA5Q86WW8 74 aa5.02□□□□□ -1.61
TREM1-202ENST00000334475 MPLKIPQ8TAP9 179 aa5.01□□□□□ -1.61
TREM1-202ENST00000334475 ACYP2P14621 99 aa4.97□□□□□ -1.61
TREM1-202ENST00000334475 DMAC1Q96GE9 116 aa4.97□□□□□ -1.61
TREM1-202ENST00000334475 HRES1P13985 223 aa4.96□□□□□ -1.62
TREM1-202ENST00000334475 A8MUU9 505 aa4.94□□□□□ -1.62
TREM1-202ENST00000334475 C20orf166-AS1Q96NR2 134 aa4.94□□□□□ -1.62
TREM1-202ENST00000334475 MT1HL1P0DM35 61 aa4.93□□□□□ -1.62
TREM1-202ENST00000334475 C7orf65Q6ZTY9 151 aa4.93□□□□□ -1.62
TREM1-202ENST00000334475 RETNLBQ9BQ08 111 aa4.92□□□□□ -1.62
TREM1-202ENST00000334475 PRO0628Q9UI54 55 aa4.92□□□□□ -1.62
TREM1-202ENST00000334475 LINC01558Q9Y6Z2 57 aa4.92□□□□□ -1.62
TREM1-202ENST00000334475 LPAP08519 4548 aa4.91□□□□□ -1.62
TREM1-202ENST00000334475 IGKV2D-30A0A075B6S6 120 aa4.91□□□□□ -1.62
TREM1-202ENST00000334475 KRTAP10-8P60410 259 aa4.91□□□□□ -1.62
TREM1-202ENST00000334475 A8MUN3 132 aa4.89□□□□□ -1.63
TREM1-202ENST00000334475 Q5VV11 94 aa4.89□□□□□ -1.63
TREM1-202ENST00000334475 CHKB-CPT1BH3BT56 60 aa4.88□□□□□ -1.63
TREM1-202ENST00000334475 PSPHP1O15172 72 aa4.88□□□□□ -1.63
TREM1-202ENST00000334475 Q75L30 129 aa4.88□□□□□ -1.63
TREM1-202ENST00000334475 BRK1Q8WUW1 75 aa4.88□□□□□ -1.63
TREM1-202ENST00000334475 PRR15LQ9BU68 103 aa4.88□□□□□ -1.63
TREM1-202ENST00000334475 C9orf92A6NGG3 77 aa4.86□□□□□ -1.63
TREM1-202ENST00000334475 SPTSSBQ8NFR3 76 aa4.79□□□□□ -1.64
TREM1-202ENST00000334475 A6NED7 52 aa4.78□□□□□ -1.64
TREM1-202ENST00000334475 SPINK7P58062 85 aa4.77□□□□□ -1.65
TREM1-202ENST00000334475 RPL37P61927 97 aaKnown RBP4.77□□□□□ -1.65
TREM1-202ENST00000334475 ATP11AUNQ6ZP68 121 aa4.76□□□□□ -1.65
TREM1-202ENST00000334475 CDC42SE1Q9NRR8 79 aa4.76□□□□□ -1.65
TREM1-202ENST00000334475 MUC2Q02817 5179 aa4.76□□□□□ -1.65
TREM1-202ENST00000334475 A0A1B0GU69 56 aa4.75□□□□□ -1.65
TREM1-202ENST00000334475 KRTAP5-3Q6L8H2 238 aa4.74□□□□□ -1.65
TREM1-202ENST00000334475 FAT4Q6V0I7 4981 aa4.73□□□□□ -1.65
TREM1-202ENST00000334475 COX6B2Q6YFQ2 88 aa4.73□□□□□ -1.65
TREM1-202ENST00000334475 LCA10Q71F78 164 aa4.7□□□□□ -1.66
TREM1-202ENST00000334475 SEC61GP60059 68 aa4.69□□□□□ -1.66
TREM1-202ENST00000334475 A0A0A0MQY5 61 aa4.68□□□□□ -1.66
TREM1-202ENST00000334475 TPRXLQ17RH7 258 aa4.68□□□□□ -1.66
TREM1-202ENST00000334475 KRTAP15-1Q3LI76 137 aa4.68□□□□□ -1.66
TREM1-202ENST00000334475 UQCR11O14957 56 aa4.67□□□□□ -1.66
TREM1-202ENST00000334475 SPATA8Q6RVD6 105 aa4.65□□□□□ -1.67
TREM1-202ENST00000334475 MUC17Q685J3 4493 aa4.65□□□□□ -1.67
TREM1-202ENST00000334475 A8MU10 97 aa4.64□□□□□ -1.67
TREM1-202ENST00000334475 MIR22HGQ0VDD5 57 aa4.62□□□□□ -1.67
TREM1-202ENST00000334475 PMAIP1Q13794 54 aa4.62□□□□□ -1.67
TREM1-202ENST00000334475 A6NN06 94 aa4.58□□□□□ -1.68
TREM1-202ENST00000334475 S4R3F8 94 aa4.56□□□□□ -1.68
TREM1-202ENST00000334475 H1FX-AS1Q4G0G2 97 aa4.54□□□□□ -1.68
TREM1-202ENST00000334475 KTN1-AS1Q86SY8 53 aa4.54□□□□□ -1.68
TREM1-202ENST00000334475 A0A1B0GU33 70 aa4.53□□□□□ -1.68
TREM1-202ENST00000334475 RBM12B-AS1Q9P1G2 102 aa4.53□□□□□ -1.68
TREM1-202ENST00000334475 SEC61BP60468 96 aaKnown RBP4.52□□□□□ -1.69
TREM1-202ENST00000334475 KRTAP9-8Q9BYQ0 159 aa4.5□□□□□ -1.69
TREM1-202ENST00000334475 H0YAA0 97 aa4.48□□□□□ -1.69
TREM1-202ENST00000334475 FSIP2Q5CZC0 6907 aa4.47□□□□□ -1.69
TREM1-202ENST00000334475 KRTAP10-6P60371 365 aaPredicted RBP4.44□□□□□ -1.7
TREM1-202ENST00000334475 CSAG1Q6PB30 78 aa4.43□□□□□ -1.7
TREM1-202ENST00000334475 K7ERS5 55 aa4.41□□□□□ -1.7
TREM1-202ENST00000334475 CRCT1Q9UGL9 99 aa4.41□□□□□ -1.7
TREM1-202ENST00000334475 KRTAP4-1Q9BYQ7 146 aa4.39□□□□□ -1.71
TREM1-202ENST00000334475 ADM2Q7Z4H4 148 aa4.35□□□□□ -1.71
TREM1-202ENST00000334475 M0QZ58 72 aa4.33□□□□□ -1.72
TREM1-202ENST00000334475 P0C880 135 aa4.33□□□□□ -1.72
TREM1-202ENST00000334475 KRTAP13-4Q3LI77 160 aa4.31□□□□□ -1.72
TREM1-202ENST00000334475 KRTAP19-2Q3LHN2 52 aa4.28□□□□□ -1.72
TREM1-202ENST00000334475 PRAC1Q96KF2 57 aa4.26□□□□□ -1.73
TREM1-202ENST00000334475 A0A0D9SG42 100 aa4.25□□□□□ -1.73
TREM1-202ENST00000334475 FLGP20930 4061 aaPredicted RBP4.24□□□□□ -1.73
TREM1-202ENST00000334475 ROMO1P60602 79 aa4.23□□□□□ -1.73
TREM1-202ENST00000334475 KRTAP12-1P59990 96 aa4.2□□□□□ -1.74
TREM1-202ENST00000334475 MT1HP80294 61 aa4.2□□□□□ -1.74
TREM1-202ENST00000334475 R4GN34 69 aa4.2□□□□□ -1.74
TREM1-202ENST00000334475 KRTAP12-2P59991 146 aa4.18□□□□□ -1.74
TREM1-202ENST00000334475 KRTAP25-1Q3LHN0 102 aa4.18□□□□□ -1.74
TREM1-202ENST00000334475 LINC01554Q52M75 96 aa4.16□□□□□ -1.74
TREM1-202ENST00000334475 SPINT4Q6UDR6 99 aa4.16□□□□□ -1.74
TREM1-202ENST00000334475 CRIPTQ9P021 101 aa4.15□□□□□ -1.75
TREM1-202ENST00000334475 SSPOA2VEC9 5147 aa4.15□□□□□ -1.75
TREM1-202ENST00000334475 USH2AO75445 5202 aa4.11□□□□□ -1.75
TREM1-202ENST00000334475 LCE1AQ5T7P2 110 aa4.09□□□□□ -1.75
TREM1-202ENST00000334475 FCGBPQ9Y6R7 5405 aaPredicted RBP4.05□□□□□ -1.76
TREM1-202ENST00000334475 SYNE2Q8WXH0 6885 aaKnown RBP3.98□□□□□ -1.77
TREM1-202ENST00000334475 MACF1Q9UPN3 7388 aaKnown RBP3.98□□□□□ -1.77
TREM1-202ENST00000334475 M0R2T5 61 aa3.95□□□□□ -1.78
TREM1-202ENST00000334475 CAMK2N1Q7Z7J9 78 aa3.95□□□□□ -1.78
TREM1-202ENST00000334475 SPRR2GQ9BYE4 73 aa3.95□□□□□ -1.78
TREM1-202ENST00000334475 C10orf95Q9H7T3 257 aa3.95□□□□□ -1.78
TREM1-202ENST00000334475 PP632Q6XCG6 107 aa3.89□□□□□ -1.79
TREM1-202ENST00000334475 MT2AP02795 61 aa3.88□□□□□ -1.79
TREM1-202ENST00000334475 PLAC4Q8WY50 150 aa3.87□□□□□ -1.79
TREM1-202ENST00000334475 MT1FP04733 61 aa3.85□□□□□ -1.79
TREM1-202ENST00000334475 TNP1P09430 55 aa3.84□□□□□ -1.79
TREM1-202ENST00000334475 KRTAP10-10P60014 251 aa3.84□□□□□ -1.79
TREM1-202ENST00000334475 KRTAP19-8Q3LI54 63 aa3.82□□□□□ -1.8
TREM1-202ENST00000334475 KRTAP2-2Q9BYT5 123 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms