RNA–Protein interactions for RNA: ENST00000332682.8

TRIM49B-201, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 1,534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-201ENST00000332682 KRTAP3-1Q9BYR8 98 aa6.1□□□□□ -1.43
TRIM49B-201ENST00000332682 RBM12B-AS1Q9P1G2 102 aa6.1□□□□□ -1.43
TRIM49B-201ENST00000332682 DMAC1Q96GE9 116 aa6.09□□□□□ -1.43
TRIM49B-201ENST00000332682 FAM236DA0A1B0GTK5 79 aa6.09□□□□□ -1.44
TRIM49B-201ENST00000332682 FAM236CP0DP71 79 aa6.09□□□□□ -1.44
TRIM49B-201ENST00000332682 KRTAP19-2Q3LHN2 52 aa6.07□□□□□ -1.44
TRIM49B-201ENST00000332682 A8MUN3 132 aa6.06□□□□□ -1.44
TRIM49B-201ENST00000332682 ATP5EP56381 51 aaPredicted RBP6.06□□□□□ -1.44
TRIM49B-201ENST00000332682 ACYP2P14621 99 aa6.01□□□□□ -1.45
TRIM49B-201ENST00000332682 H1FX-AS1Q4G0G2 97 aa6.01□□□□□ -1.45
TRIM49B-201ENST00000332682 KRTAP9-9Q9BYP9 154 aa6.01□□□□□ -1.45
TRIM49B-201ENST00000332682 KRTAP9-4Q9BYQ2 154 aa6.01□□□□□ -1.45
TRIM49B-201ENST00000332682 FAT4Q6V0I7 4981 aa5.96□□□□□ -1.45
TRIM49B-201ENST00000332682 COA5Q86WW8 74 aa5.96□□□□□ -1.46
TRIM49B-201ENST00000332682 KRTAP19-1Q8IUB9 90 aa5.95□□□□□ -1.46
TRIM49B-201ENST00000332682 KRTAP4-8A0A0G2JLE6 195 aa5.94□□□□□ -1.46
TRIM49B-201ENST00000332682 S4R3F8 94 aa5.94□□□□□ -1.46
TRIM49B-201ENST00000332682 LCA10Q71F78 164 aa5.93□□□□□ -1.46
TRIM49B-201ENST00000332682 SERP1Q9Y6X1 66 aa5.92□□□□□ -1.46
TRIM49B-201ENST00000332682 FLGP20930 4061 aaPredicted RBP5.92□□□□□ -1.46
TRIM49B-201ENST00000332682 CHKB-CPT1BH3BT56 60 aa5.91□□□□□ -1.46
TRIM49B-201ENST00000332682 MT1HP80294 61 aa5.87□□□□□ -1.47
TRIM49B-201ENST00000332682 RPS28P62857 69 aaKnown RBP5.83□□□□□ -1.48
TRIM49B-201ENST00000332682 SPTSSBQ8NFR3 76 aa5.82□□□□□ -1.48
TRIM49B-201ENST00000332682 CSAG1Q6PB30 78 aa5.81□□□□□ -1.48
TRIM49B-201ENST00000332682 M0R2T5 61 aa5.77□□□□□ -1.49
TRIM49B-201ENST00000332682 KRTAP4-7Q9BYR0 210 aa5.74□□□□□ -1.49
TRIM49B-201ENST00000332682 SMIM26A0A096LP01 95 aa5.74□□□□□ -1.49
TRIM49B-201ENST00000332682 LCE1DQ5T752 114 aa5.73□□□□□ -1.49
TRIM49B-201ENST00000332682 H0YAA0 97 aa5.69□□□□□ -1.5
TRIM49B-201ENST00000332682 LINC01558Q9Y6Z2 57 aa5.69□□□□□ -1.5
TRIM49B-201ENST00000332682 KRTAP10-6P60371 365 aaPredicted RBP5.67□□□□□ -1.5
TRIM49B-201ENST00000332682 Q1T7F1 81 aa5.67□□□□□ -1.5
TRIM49B-201ENST00000332682 ADM2Q7Z4H4 148 aa5.65□□□□□ -1.5
TRIM49B-201ENST00000332682 V9GYY9 64 aa5.64□□□□□ -1.51
TRIM49B-201ENST00000332682 A0A1B0GU69 56 aa5.64□□□□□ -1.51
TRIM49B-201ENST00000332682 KRTAP9-8Q9BYQ0 159 aa5.64□□□□□ -1.51
TRIM49B-201ENST00000332682 P0C880 135 aa5.62□□□□□ -1.51
TRIM49B-201ENST00000332682 SEC61GP60059 68 aa5.62□□□□□ -1.51
TRIM49B-201ENST00000332682 MT2AP02795 61 aa5.61□□□□□ -1.51
TRIM49B-201ENST00000332682 PRR15LQ9BU68 103 aa5.6□□□□□ -1.51
TRIM49B-201ENST00000332682 KRTAP4-9Q9BYQ8 210 aa5.58□□□□□ -1.52
TRIM49B-201ENST00000332682 PSPHP1O15172 72 aa5.58□□□□□ -1.52
TRIM49B-201ENST00000332682 MT1FP04733 61 aa5.58□□□□□ -1.52
TRIM49B-201ENST00000332682 Q5VV11 94 aa5.53□□□□□ -1.52
TRIM49B-201ENST00000332682 KRTAP10-10P60014 251 aa5.53□□□□□ -1.52
TRIM49B-201ENST00000332682 KRTAP4-2Q9BYR5 136 aa5.51□□□□□ -1.53
TRIM49B-201ENST00000332682 A0A1B0GU33 70 aa5.5□□□□□ -1.53
TRIM49B-201ENST00000332682 CRIPTQ9P021 101 aa5.48□□□□□ -1.53
TRIM49B-201ENST00000332682 KRTAP13-4Q3LI77 160 aa5.47□□□□□ -1.53
TRIM49B-201ENST00000332682 R4GN34 69 aa5.46□□□□□ -1.54
TRIM49B-201ENST00000332682 M0QZ58 72 aa5.45□□□□□ -1.54
TRIM49B-201ENST00000332682 UQCR11O14957 56 aa5.43□□□□□ -1.54
TRIM49B-201ENST00000332682 SPATA8Q6RVD6 105 aa5.43□□□□□ -1.54
TRIM49B-201ENST00000332682 KRTAP9-3Q9BYQ3 159 aa5.43□□□□□ -1.54
TRIM49B-201ENST00000332682 SPRR2GQ9BYE4 73 aa5.42□□□□□ -1.54
TRIM49B-201ENST00000332682 A6NED7 52 aa5.4□□□□□ -1.54
TRIM49B-201ENST00000332682 MIR22HGQ0VDD5 57 aa5.37□□□□□ -1.55
TRIM49B-201ENST00000332682 KRTAP4-11Q9BYQ6 195 aa5.36□□□□□ -1.55
TRIM49B-201ENST00000332682 LINC01554Q52M75 96 aa5.35□□□□□ -1.55
TRIM49B-201ENST00000332682 LCE4AQ5TA78 99 aa5.35□□□□□ -1.55
TRIM49B-201ENST00000332682 A8MU10 97 aa5.33□□□□□ -1.56
TRIM49B-201ENST00000332682 A0A0D9SG42 100 aa5.33□□□□□ -1.56
TRIM49B-201ENST00000332682 KRTAP19-8Q3LI54 63 aa5.3□□□□□ -1.56
TRIM49B-201ENST00000332682 CDC42SE1Q9NRR8 79 aa5.28□□□□□ -1.56
TRIM49B-201ENST00000332682 A6NN06 94 aa5.27□□□□□ -1.57
TRIM49B-201ENST00000332682 USH2AO75445 5202 aa5.26□□□□□ -1.57
TRIM49B-201ENST00000332682 MT1BP07438 61 aa5.24□□□□□ -1.57
TRIM49B-201ENST00000332682 KRTAP12-1P59990 96 aa5.24□□□□□ -1.57
TRIM49B-201ENST00000332682 BRK1Q8WUW1 75 aa5.23□□□□□ -1.57
TRIM49B-201ENST00000332682 KRTAP12-2P59991 146 aa5.23□□□□□ -1.57
TRIM49B-201ENST00000332682 KRTAP9-7A8MTY7 169 aa5.21□□□□□ -1.58
TRIM49B-201ENST00000332682 SPINT4Q6UDR6 99 aa5.21□□□□□ -1.58
TRIM49B-201ENST00000332682 LCE5AQ5TCM9 118 aa5.18□□□□□ -1.58
TRIM49B-201ENST00000332682 PLAC4Q8WY50 150 aa5.18□□□□□ -1.58
TRIM49B-201ENST00000332682 KRTAP19-4Q3LI73 84 aa5.17□□□□□ -1.58
TRIM49B-201ENST00000332682 FSIP2Q5CZC0 6907 aa5.15□□□□□ -1.58
TRIM49B-201ENST00000332682 K7ERS5 55 aa5.13□□□□□ -1.59
TRIM49B-201ENST00000332682 SSPOA2VEC9 5147 aa5.11□□□□□ -1.59
TRIM49B-201ENST00000332682 CAMK2N1Q7Z7J9 78 aa5.1□□□□□ -1.59
TRIM49B-201ENST00000332682 MT1XP80297 61 aa5.05□□□□□ -1.6
TRIM49B-201ENST00000332682 PRO0628Q9UI54 55 aa5.05□□□□□ -1.6
TRIM49B-201ENST00000332682 KRTAP10-5P60370 271 aa5.03□□□□□ -1.6
TRIM49B-201ENST00000332682 KRTAP19-6Q3LI70 58 aa5.02□□□□□ -1.61
TRIM49B-201ENST00000332682 KRTAP5-3Q6L8H2 238 aa5□□□□□ -1.61
TRIM49B-201ENST00000332682 PRO2289Q9P1D8 64 aa4.98□□□□□ -1.61
TRIM49B-201ENST00000332682 C10orf95Q9H7T3 257 aa4.97□□□□□ -1.61
TRIM49B-201ENST00000332682 H3BS24 57 aa4.95□□□□□ -1.62
TRIM49B-201ENST00000332682 PMAIP1Q13794 54 aa4.93□□□□□ -1.62
TRIM49B-201ENST00000332682 CRCT1Q9UGL9 99 aa4.92□□□□□ -1.62
TRIM49B-201ENST00000332682 ROMO1P60602 79 aa4.91□□□□□ -1.62
TRIM49B-201ENST00000332682 FCGBPQ9Y6R7 5405 aaPredicted RBP4.91□□□□□ -1.62
TRIM49B-201ENST00000332682 KRTAP10-7P60409 375 aaPredicted RBP4.83□□□□□ -1.64
TRIM49B-201ENST00000332682 TNP1P09430 55 aa4.82□□□□□ -1.64
TRIM49B-201ENST00000332682 KRTAP25-1Q3LHN0 102 aa4.81□□□□□ -1.64
TRIM49B-201ENST00000332682 KRTAP10-12P60413 245 aa4.77□□□□□ -1.65
TRIM49B-201ENST00000332682 SVIPQ8NHG7 77 aa4.75□□□□□ -1.65
TRIM49B-201ENST00000332682 KMT2DO14686 5537 aa4.71□□□□□ -1.66
TRIM49B-201ENST00000332682 MACF1Q9UPN3 7388 aaKnown RBP4.7□□□□□ -1.66
TRIM49B-201ENST00000332682 KTN1-AS1Q86SY8 53 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms