RNA–Protein interactions for RNA: ENST00000314992.9

EXD1-201, Transcript of exonuclease 3'-5' domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene EXD1, Length 2,942 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXD1-201ENST00000314992 XP32Q5T750 250 aa3.56□□□□□ -1.84
EXD1-201ENST00000314992 ACYP2P14621 99 aa3.55□□□□□ -1.84
EXD1-201ENST00000314992 DMAC1Q96GE9 116 aa3.55□□□□□ -1.84
EXD1-201ENST00000314992 FLG2Q5D862 2391 aaPredicted RBP3.55□□□□□ -1.84
EXD1-201ENST00000314992 IGLV7-43P04211 117 aa3.55□□□□□ -1.84
EXD1-201ENST00000314992 NOTCH2NLQ7Z3S9 236 aa3.54□□□□□ -1.84
EXD1-201ENST00000314992 Q5W150 140 aa3.54□□□□□ -1.84
EXD1-201ENST00000314992 MUC17Q685J3 4493 aa3.54□□□□□ -1.84
EXD1-201ENST00000314992 KRTAP10-1P60331 282 aa3.53□□□□□ -1.84
EXD1-201ENST00000314992 SSPOA2VEC9 5147 aa3.53□□□□□ -1.85
EXD1-201ENST00000314992 KRTAP4-8Q9BYQ9 185 aa3.51□□□□□ -1.85
EXD1-201ENST00000314992 IGKV2-30P06310 120 aa3.51□□□□□ -1.85
EXD1-201ENST00000314992 KRTAP16-1A8MUX0 517 aa3.5□□□□□ -1.85
EXD1-201ENST00000314992 CSAG1Q6PB30 78 aa3.49□□□□□ -1.85
EXD1-201ENST00000314992 ANAPC11Q9NYG5 84 aa3.49□□□□□ -1.85
EXD1-201ENST00000314992 SMR3BP02814 79 aaPredicted RBP3.48□□□□□ -1.85
EXD1-201ENST00000314992 SPATA8Q6RVD6 105 aa3.48□□□□□ -1.85
EXD1-201ENST00000314992 Q6ZSA8 131 aa3.48□□□□□ -1.85
EXD1-201ENST00000314992 RETNLBQ9BQ08 111 aa3.47□□□□□ -1.85
EXD1-201ENST00000314992 CIRBP-AS1Q8TBR5 109 aa3.47□□□□□ -1.85
EXD1-201ENST00000314992 KRTAP13-2Q52LG2 175 aa3.46□□□□□ -1.86
EXD1-201ENST00000314992 SPINK6Q6UWN8 80 aa3.45□□□□□ -1.86
EXD1-201ENST00000314992 RPS29P62273 56 aaKnown RBP3.45□□□□□ -1.86
EXD1-201ENST00000314992 IGKV2D-30A0A075B6S6 120 aa3.44□□□□□ -1.86
EXD1-201ENST00000314992 A0A1B0GU69 56 aa3.43□□□□□ -1.86
EXD1-201ENST00000314992 KRTAP1-4P0C5Y4 121 aa3.43□□□□□ -1.86
EXD1-201ENST00000314992 UQCR11O14957 56 aa3.41□□□□□ -1.86
EXD1-201ENST00000314992 SPINK1P00995 79 aa3.41□□□□□ -1.86
EXD1-201ENST00000314992 MIR22HGQ0VDD5 57 aa3.39□□□□□ -1.87
EXD1-201ENST00000314992 LPAP08519 4548 aa3.39□□□□□ -1.87
EXD1-201ENST00000314992 KRTAP4-12Q9BQ66 201 aa3.37□□□□□ -1.87
EXD1-201ENST00000314992 ROMO1P60602 79 aa3.36□□□□□ -1.87
EXD1-201ENST00000314992 KRTAP10-8P60410 259 aa3.35□□□□□ -1.87
EXD1-201ENST00000314992 A8MUU9 505 aa3.34□□□□□ -1.87
EXD1-201ENST00000314992 TYMSOSQ8TAI1 123 aa3.34□□□□□ -1.87
EXD1-201ENST00000314992 C20orf166-AS1Q96NR2 134 aa3.34□□□□□ -1.87
EXD1-201ENST00000314992 CRIPTQ9P021 101 aa3.33□□□□□ -1.88
EXD1-201ENST00000314992 P0C880 135 aa3.33□□□□□ -1.88
EXD1-201ENST00000314992 LINC00304Q8N9R0 145 aa3.31□□□□□ -1.88
EXD1-201ENST00000314992 KRTAP25-1Q3LHN0 102 aa3.3□□□□□ -1.88
EXD1-201ENST00000314992 FSIP2Q5CZC0 6907 aa3.29□□□□□ -1.88
EXD1-201ENST00000314992 LCE3BQ5TA77 95 aa3.29□□□□□ -1.88
EXD1-201ENST00000314992 KRTAP19-4Q3LI73 84 aa3.28□□□□□ -1.88
EXD1-201ENST00000314992 KRTAP3-1Q9BYR8 98 aa3.27□□□□□ -1.89
EXD1-201ENST00000314992 KRTAP6-3Q3LI67 103 aa3.26□□□□□ -1.89
EXD1-201ENST00000314992 H0YAA0 97 aa3.26□□□□□ -1.89
EXD1-201ENST00000314992 H1FX-AS1Q4G0G2 97 aa3.25□□□□□ -1.89
EXD1-201ENST00000314992 A0A1B0GU33 70 aa3.24□□□□□ -1.89
EXD1-201ENST00000314992 COX6B2Q6YFQ2 88 aa3.23□□□□□ -1.89
EXD1-201ENST00000314992 KRTAP4-8A0A0G2JLE6 195 aa3.23□□□□□ -1.89
EXD1-201ENST00000314992 KRTAP19-1Q8IUB9 90 aa3.23□□□□□ -1.89
EXD1-201ENST00000314992 NEBP20929 6669 aa3.22□□□□□ -1.89
EXD1-201ENST00000314992 KRTAP20-1Q3LI63 56 aa3.21□□□□□ -1.9
EXD1-201ENST00000314992 KRTAP9-9Q9BYP9 154 aa3.2□□□□□ -1.9
EXD1-201ENST00000314992 KRTAP9-4Q9BYQ2 154 aa3.2□□□□□ -1.9
EXD1-201ENST00000314992 A0A0A0MQY5 61 aa3.19□□□□□ -1.9
EXD1-201ENST00000314992 NDUFAF8A1L188 74 aa3.19□□□□□ -1.9
EXD1-201ENST00000314992 USH2AO75445 5202 aa3.19□□□□□ -1.9
EXD1-201ENST00000314992 FCGBPQ9Y6R7 5405 aaPredicted RBP3.17□□□□□ -1.9
EXD1-201ENST00000314992 KRTAP9-8Q9BYQ0 159 aa3.17□□□□□ -1.9
EXD1-201ENST00000314992 K7ERS5 55 aa3.16□□□□□ -1.9
EXD1-201ENST00000314992 C9orf92A6NGG3 77 aa3.16□□□□□ -1.9
EXD1-201ENST00000314992 LCE1DQ5T752 114 aa3.16□□□□□ -1.9
EXD1-201ENST00000314992 SPINT4Q6UDR6 99 aa3.15□□□□□ -1.9
EXD1-201ENST00000314992 KRTAP5-3Q6L8H2 238 aa3.15□□□□□ -1.91
EXD1-201ENST00000314992 KRTAP4-7Q9BYR0 210 aa3.15□□□□□ -1.91
EXD1-201ENST00000314992 KRTAP10-6P60371 365 aaPredicted RBP3.14□□□□□ -1.91
EXD1-201ENST00000314992 RPL37P61927 97 aaKnown RBP3.13□□□□□ -1.91
EXD1-201ENST00000314992 TPRXLQ17RH7 258 aa3.13□□□□□ -1.91
EXD1-201ENST00000314992 C10orf95Q9H7T3 257 aa3.12□□□□□ -1.91
EXD1-201ENST00000314992 KRTAP15-1Q3LI76 137 aa3.1□□□□□ -1.91
EXD1-201ENST00000314992 MT1HP80294 61 aa3.09□□□□□ -1.91
EXD1-201ENST00000314992 KRTAP19-2Q3LHN2 52 aa3.09□□□□□ -1.91
EXD1-201ENST00000314992 KRTAP4-9Q9BYQ8 210 aa3.09□□□□□ -1.92
EXD1-201ENST00000314992 S4R3F8 94 aa3.07□□□□□ -1.92
EXD1-201ENST00000314992 MACF1Q9UPN3 7388 aaKnown RBP3.07□□□□□ -1.92
EXD1-201ENST00000314992 SYNE2Q8WXH0 6885 aaKnown RBP3.06□□□□□ -1.92
EXD1-201ENST00000314992 KRTAP13-4Q3LI77 160 aa3.06□□□□□ -1.92
EXD1-201ENST00000314992 A0A0D9SG42 100 aa3.03□□□□□ -1.92
EXD1-201ENST00000314992 KRTAP2-3P0C7H8 128 aa3.02□□□□□ -1.93
EXD1-201ENST00000314992 KRTAP4-2Q9BYR5 136 aa3.02□□□□□ -1.93
EXD1-201ENST00000314992 KRTAP2-4Q9BYR9 128 aa3.02□□□□□ -1.93
EXD1-201ENST00000314992 M0QZ58 72 aa3.02□□□□□ -1.93
EXD1-201ENST00000314992 FLGP20930 4061 aaPredicted RBP3.01□□□□□ -1.93
EXD1-201ENST00000314992 KRTAP4-1Q9BYQ7 146 aa3□□□□□ -1.93
EXD1-201ENST00000314992 GPR98Q8WXG9 6306 aa3□□□□□ -1.93
EXD1-201ENST00000314992 KRTAP19-6Q3LI70 58 aa2.99□□□□□ -1.93
EXD1-201ENST00000314992 KRTAP12-1P59990 96 aa2.99□□□□□ -1.93
EXD1-201ENST00000314992 SEC61BP60468 96 aaKnown RBP2.97□□□□□ -1.93
EXD1-201ENST00000314992 LUZP6Q538Z0 58 aa2.97□□□□□ -1.93
EXD1-201ENST00000314992 KRTAP12-2P59991 146 aa2.96□□□□□ -1.93
EXD1-201ENST00000314992 KRTAP4-11Q9BYQ6 195 aa2.92□□□□□ -1.94
EXD1-201ENST00000314992 KRTAP5-9P26371 169 aa2.89□□□□□ -1.95
EXD1-201ENST00000314992 LCE5AQ5TCM9 118 aa2.89□□□□□ -1.95
EXD1-201ENST00000314992 KRTAP2-2Q9BYT5 123 aa2.88□□□□□ -1.95
EXD1-201ENST00000314992 KRTAP2-1Q9BYU5 128 aa2.88□□□□□ -1.95
EXD1-201ENST00000314992 MUC12Q9UKN1 5478 aa2.85□□□□□ -1.95
EXD1-201ENST00000314992 HMCN1Q96RW7 5635 aa2.84□□□□□ -1.96
EXD1-201ENST00000314992 KRTAP9-3Q9BYQ3 159 aa2.82□□□□□ -1.96
EXD1-201ENST00000314992 R4GN34 69 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 171.6 ms