RNA–Protein interactions for RNA: ENST00000312547.6

CHMP2A-201, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-201ENST00000312547 DMAC1Q96GE9 116 aa6.11□□□□□ -1.43
CHMP2A-201ENST00000312547 S4R3F8 94 aa6.1□□□□□ -1.43
CHMP2A-201ENST00000312547 LCA10Q71F78 164 aa6.08□□□□□ -1.44
CHMP2A-201ENST00000312547 SPANXA2-OT1Q8N9U9 137 aa6.07□□□□□ -1.44
CHMP2A-201ENST00000312547 CYSTM1Q9H1C7 97 aa6.06□□□□□ -1.44
CHMP2A-201ENST00000312547 KRTAP9-8Q9BYQ0 159 aa6.05□□□□□ -1.44
CHMP2A-201ENST00000312547 NDUFC1O43677 76 aa6.04□□□□□ -1.44
CHMP2A-201ENST00000312547 CCDC179H3BU77 68 aa6.03□□□□□ -1.44
CHMP2A-201ENST00000312547 H7BZZ5 65 aa6.03□□□□□ -1.44
CHMP2A-201ENST00000312547 CSAG1Q6PB30 78 aa6.01□□□□□ -1.45
CHMP2A-201ENST00000312547 MT2AP02795 61 aa6□□□□□ -1.45
CHMP2A-201ENST00000312547 ACYP2P14621 99 aa5.99□□□□□ -1.45
CHMP2A-201ENST00000312547 MT1FP04733 61 aa5.95□□□□□ -1.46
CHMP2A-201ENST00000312547 SSPOA2VEC9 5147 aa5.94□□□□□ -1.46
CHMP2A-201ENST00000312547 KRTAP10-10P60014 251 aa5.9□□□□□ -1.46
CHMP2A-201ENST00000312547 H0YAA0 97 aa5.88□□□□□ -1.47
CHMP2A-201ENST00000312547 USH2AO75445 5202 aa5.88□□□□□ -1.47
CHMP2A-201ENST00000312547 KRTAP9-7A8MTY7 169 aa5.86□□□□□ -1.47
CHMP2A-201ENST00000312547 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.86□□□□□ -1.47
CHMP2A-201ENST00000312547 CHKB-CPT1BH3BT56 60 aa5.86□□□□□ -1.47
CHMP2A-201ENST00000312547 COA5Q86WW8 74 aa5.86□□□□□ -1.47
CHMP2A-201ENST00000312547 KRTAP9-3Q9BYQ3 159 aa5.85□□□□□ -1.47
CHMP2A-201ENST00000312547 ATP5EP56381 51 aaPredicted RBP5.83□□□□□ -1.48
CHMP2A-201ENST00000312547 SPTSSBQ8NFR3 76 aa5.83□□□□□ -1.48
CHMP2A-201ENST00000312547 TMEM258P61165 79 aa5.82□□□□□ -1.48
CHMP2A-201ENST00000312547 ADM2Q7Z4H4 148 aa5.79□□□□□ -1.48
CHMP2A-201ENST00000312547 PCP4P48539 62 aa5.77□□□□□ -1.49
CHMP2A-201ENST00000312547 FCGBPQ9Y6R7 5405 aaPredicted RBP5.75□□□□□ -1.49
CHMP2A-201ENST00000312547 LCE2BO14633 110 aa5.74□□□□□ -1.49
CHMP2A-201ENST00000312547 KRTAP19-1Q8IUB9 90 aa5.73□□□□□ -1.49
CHMP2A-201ENST00000312547 CRIPTQ9P021 101 aa5.73□□□□□ -1.49
CHMP2A-201ENST00000312547 P0C880 135 aa5.72□□□□□ -1.49
CHMP2A-201ENST00000312547 SPRR2GQ9BYE4 73 aa5.71□□□□□ -1.5
CHMP2A-201ENST00000312547 SYNE2Q8WXH0 6885 aaKnown RBP5.64□□□□□ -1.51
CHMP2A-201ENST00000312547 SERP1Q9Y6X1 66 aa5.64□□□□□ -1.51
CHMP2A-201ENST00000312547 MACF1Q9UPN3 7388 aaKnown RBP5.63□□□□□ -1.51
CHMP2A-201ENST00000312547 KRTAP19-8Q3LI54 63 aa5.62□□□□□ -1.51
CHMP2A-201ENST00000312547 R4GN34 69 aa5.59□□□□□ -1.51
CHMP2A-201ENST00000312547 MT1BP07438 61 aa5.58□□□□□ -1.52
CHMP2A-201ENST00000312547 SEC61GP60059 68 aa5.58□□□□□ -1.52
CHMP2A-201ENST00000312547 M0QZ58 72 aa5.57□□□□□ -1.52
CHMP2A-201ENST00000312547 Q5VV11 94 aa5.54□□□□□ -1.52
CHMP2A-201ENST00000312547 A0A1B0GU69 56 aa5.53□□□□□ -1.52
CHMP2A-201ENST00000312547 LINC01558Q9Y6Z2 57 aa5.53□□□□□ -1.52
CHMP2A-201ENST00000312547 KRTAP13-4Q3LI77 160 aa5.51□□□□□ -1.53
CHMP2A-201ENST00000312547 A0A1B0GU33 70 aa5.49□□□□□ -1.53
CHMP2A-201ENST00000312547 RPS28P62857 69 aaKnown RBP5.49□□□□□ -1.53
CHMP2A-201ENST00000312547 KRTAP19-6Q3LI70 58 aa5.48□□□□□ -1.53
CHMP2A-201ENST00000312547 LINC01554Q52M75 96 aa5.45□□□□□ -1.54
CHMP2A-201ENST00000312547 PRR15LQ9BU68 103 aa5.45□□□□□ -1.54
CHMP2A-201ENST00000312547 SMIM26A0A096LP01 95 aa5.44□□□□□ -1.54
CHMP2A-201ENST00000312547 Q1T7F1 81 aa5.42□□□□□ -1.54
CHMP2A-201ENST00000312547 A6NN06 94 aa5.41□□□□□ -1.54
CHMP2A-201ENST00000312547 SPATA8Q6RVD6 105 aa5.41□□□□□ -1.54
CHMP2A-201ENST00000312547 V9GYY9 64 aa5.41□□□□□ -1.54
CHMP2A-201ENST00000312547 PLAC4Q8WY50 150 aa5.39□□□□□ -1.55
CHMP2A-201ENST00000312547 KRTAP10-5P60370 271 aa5.36□□□□□ -1.55
CHMP2A-201ENST00000312547 KRTAP6-3Q3LI67 103 aa5.34□□□□□ -1.55
CHMP2A-201ENST00000312547 A0A0D9SG42 100 aa5.33□□□□□ -1.56
CHMP2A-201ENST00000312547 PSPHP1O15172 72 aa5.32□□□□□ -1.56
CHMP2A-201ENST00000312547 MT1XP80297 61 aa5.31□□□□□ -1.56
CHMP2A-201ENST00000312547 NEBP20929 6669 aa5.3□□□□□ -1.56
CHMP2A-201ENST00000312547 UQCR11O14957 56 aa5.3□□□□□ -1.56
CHMP2A-201ENST00000312547 A8MU10 97 aa5.29□□□□□ -1.56
CHMP2A-201ENST00000312547 KRTAP12-1P59990 96 aa5.28□□□□□ -1.56
CHMP2A-201ENST00000312547 MUC12Q9UKN1 5478 aa5.28□□□□□ -1.56
CHMP2A-201ENST00000312547 PRO2289Q9P1D8 64 aa5.26□□□□□ -1.57
CHMP2A-201ENST00000312547 KRTAP12-2P59991 146 aa5.23□□□□□ -1.57
CHMP2A-201ENST00000312547 MIR22HGQ0VDD5 57 aa5.22□□□□□ -1.57
CHMP2A-201ENST00000312547 SPINT4Q6UDR6 99 aa5.22□□□□□ -1.57
CHMP2A-201ENST00000312547 CAMK2N1Q7Z7J9 78 aa5.19□□□□□ -1.58
CHMP2A-201ENST00000312547 A6NED7 52 aa5.15□□□□□ -1.59
CHMP2A-201ENST00000312547 KRTAP20-1Q3LI63 56 aa5.09□□□□□ -1.59
CHMP2A-201ENST00000312547 KRTAP10-7P60409 375 aaPredicted RBP5.06□□□□□ -1.6
CHMP2A-201ENST00000312547 KMT2DO14686 5537 aa5.04□□□□□ -1.6
CHMP2A-201ENST00000312547 KRTAP10-12P60413 245 aa5.04□□□□□ -1.6
CHMP2A-201ENST00000312547 MDN1Q9NU22 5596 aa5.04□□□□□ -1.6
CHMP2A-201ENST00000312547 CDC42SE1Q9NRR8 79 aa5.03□□□□□ -1.6
CHMP2A-201ENST00000312547 K7ERS5 55 aa5.02□□□□□ -1.61
CHMP2A-201ENST00000312547 C10orf95Q9H7T3 257 aa5.01□□□□□ -1.61
CHMP2A-201ENST00000312547 SVIPQ8NHG7 77 aa5□□□□□ -1.61
CHMP2A-201ENST00000312547 KRTAP5-9P26371 169 aa4.99□□□□□ -1.61
CHMP2A-201ENST00000312547 KRTAP4-8A0A0G2JLE6 195 aa4.95□□□□□ -1.62
CHMP2A-201ENST00000312547 KRTAP4-8Q9BYQ9 185 aa4.95□□□□□ -1.62
CHMP2A-201ENST00000312547 KRTAP8-1Q8IUC2 63 aa4.9□□□□□ -1.63
CHMP2A-201ENST00000312547 TNP1P09430 55 aa4.89□□□□□ -1.63
CHMP2A-201ENST00000312547 KRTAP2-3P0C7H8 128 aa4.86□□□□□ -1.63
CHMP2A-201ENST00000312547 KRTAP2-4Q9BYR9 128 aa4.86□□□□□ -1.63
CHMP2A-201ENST00000312547 BRK1Q8WUW1 75 aa4.83□□□□□ -1.64
CHMP2A-201ENST00000312547 KRTAP25-1Q3LHN0 102 aa4.82□□□□□ -1.64
CHMP2A-201ENST00000312547 ROMO1P60602 79 aa4.79□□□□□ -1.64
CHMP2A-201ENST00000312547 SPRR2FQ96RM1 72 aa4.79□□□□□ -1.64
CHMP2A-201ENST00000312547 LCE3AQ5TA76 89 aa4.77□□□□□ -1.65
CHMP2A-201ENST00000312547 KRTAP19-7Q3SYF9 63 aa4.75□□□□□ -1.65
CHMP2A-201ENST00000312547 LOC100996750A0A140TA64 210 aa4.74□□□□□ -1.65
CHMP2A-201ENST00000312547 KRTAP4-6Q9BYQ5 205 aa4.74□□□□□ -1.65
CHMP2A-201ENST00000312547 SPRR2EP22531 72 aa4.73□□□□□ -1.65
CHMP2A-201ENST00000312547 SPRR2BP35325 72 aa4.73□□□□□ -1.65
CHMP2A-201ENST00000312547 SPRR2AP35326 72 aa4.73□□□□□ -1.65
CHMP2A-201ENST00000312547 KRTAP19-5Q3LI72 72 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 93.6 ms