RNA–Protein interactions for RNA: ENST00000302273.2

VPREB1-201, Transcript of V-set pre-B cell surrogate light chain 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene VPREB1, Length 626 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB1-201ENST00000302273 IGKV2D-30A0A075B6S6 120 aa4.48□□□□□ -1.69
VPREB1-201ENST00000302273 V9GYY9 64 aa4.46□□□□□ -1.7
VPREB1-201ENST00000302273 MT1HP80294 61 aa4.44□□□□□ -1.7
VPREB1-201ENST00000302273 SVIPQ8NHG7 77 aa4.44□□□□□ -1.7
VPREB1-201ENST00000302273 DMAC1Q96GE9 116 aa4.44□□□□□ -1.7
VPREB1-201ENST00000302273 CRCT1Q9UGL9 99 aa4.44□□□□□ -1.7
VPREB1-201ENST00000302273 ACYP2P14621 99 aa4.42□□□□□ -1.7
VPREB1-201ENST00000302273 LCE2DQ5TA82 110 aaPredicted RBP4.42□□□□□ -1.7
VPREB1-201ENST00000302273 H1FX-AS1Q4G0G2 97 aa4.41□□□□□ -1.7
VPREB1-201ENST00000302273 A8MUN3 132 aa4.39□□□□□ -1.71
VPREB1-201ENST00000302273 PSPHP1O15172 72 aa4.39□□□□□ -1.71
VPREB1-201ENST00000302273 LINC01558Q9Y6Z2 57 aa4.39□□□□□ -1.71
VPREB1-201ENST00000302273 M0R2T5 61 aa4.38□□□□□ -1.71
VPREB1-201ENST00000302273 Q5VV11 94 aa4.37□□□□□ -1.71
VPREB1-201ENST00000302273 PRR15LQ9BU68 103 aa4.36□□□□□ -1.71
VPREB1-201ENST00000302273 CHKB-CPT1BH3BT56 60 aa4.35□□□□□ -1.71
VPREB1-201ENST00000302273 PRO0628Q9UI54 55 aa4.35□□□□□ -1.71
VPREB1-201ENST00000302273 BRK1Q8WUW1 75 aa4.34□□□□□ -1.71
VPREB1-201ENST00000302273 FLGP20930 4061 aaPredicted RBP4.32□□□□□ -1.72
VPREB1-201ENST00000302273 LORP23490 312 aaPredicted RBP4.32□□□□□ -1.72
VPREB1-201ENST00000302273 KRTAP10-6P60371 365 aaPredicted RBP4.32□□□□□ -1.72
VPREB1-201ENST00000302273 KRTAP3-1Q9BYR8 98 aa4.32□□□□□ -1.72
VPREB1-201ENST00000302273 S4R3F8 94 aa4.28□□□□□ -1.72
VPREB1-201ENST00000302273 CSAG1Q6PB30 78 aa4.27□□□□□ -1.73
VPREB1-201ENST00000302273 A6NED7 52 aa4.26□□□□□ -1.73
VPREB1-201ENST00000302273 KRTAP9-8Q9BYQ0 159 aa4.25□□□□□ -1.73
VPREB1-201ENST00000302273 LCA10Q71F78 164 aa4.24□□□□□ -1.73
VPREB1-201ENST00000302273 A0A1B0GU69 56 aa4.23□□□□□ -1.73
VPREB1-201ENST00000302273 A8MU10 97 aa4.22□□□□□ -1.73
VPREB1-201ENST00000302273 SPTSSBQ8NFR3 76 aa4.22□□□□□ -1.73
VPREB1-201ENST00000302273 CDC42SE1Q9NRR8 79 aa4.22□□□□□ -1.73
VPREB1-201ENST00000302273 KRTAP9-7A8MTY7 169 aa4.2□□□□□ -1.74
VPREB1-201ENST00000302273 KRTAP3-3Q9BYR6 98 aa4.2□□□□□ -1.74
VPREB1-201ENST00000302273 H0YAA0 97 aa4.19□□□□□ -1.74
VPREB1-201ENST00000302273 MT2AP02795 61 aa4.18□□□□□ -1.74
VPREB1-201ENST00000302273 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.16□□□□□ -1.74
VPREB1-201ENST00000302273 KRTAP10-10P60014 251 aa4.16□□□□□ -1.74
VPREB1-201ENST00000302273 SEC61GP60059 68 aa4.15□□□□□ -1.75
VPREB1-201ENST00000302273 SPATA8Q6RVD6 105 aa4.15□□□□□ -1.75
VPREB1-201ENST00000302273 SSPOA2VEC9 5147 aa4.14□□□□□ -1.75
VPREB1-201ENST00000302273 USH2AO75445 5202 aa4.14□□□□□ -1.75
VPREB1-201ENST00000302273 UQCR11O14957 56 aa4.13□□□□□ -1.75
VPREB1-201ENST00000302273 MT1FP04733 61 aa4.13□□□□□ -1.75
VPREB1-201ENST00000302273 CRIPTQ9P021 101 aa4.13□□□□□ -1.75
VPREB1-201ENST00000302273 MIR22HGQ0VDD5 57 aa4.11□□□□□ -1.75
VPREB1-201ENST00000302273 PMAIP1Q13794 54 aa4.11□□□□□ -1.75
VPREB1-201ENST00000302273 KRTAP9-3Q9BYQ3 159 aa4.11□□□□□ -1.75
VPREB1-201ENST00000302273 FCGBPQ9Y6R7 5405 aaPredicted RBP4.1□□□□□ -1.75
VPREB1-201ENST00000302273 A6NN06 94 aa4.09□□□□□ -1.75
VPREB1-201ENST00000302273 A0A1B0GU33 70 aa4.06□□□□□ -1.76
VPREB1-201ENST00000302273 SYNE2Q8WXH0 6885 aaKnown RBP4.05□□□□□ -1.76
VPREB1-201ENST00000302273 ADM2Q7Z4H4 148 aa4.04□□□□□ -1.76
VPREB1-201ENST00000302273 SPRR2GQ9BYE4 73 aa4.04□□□□□ -1.76
VPREB1-201ENST00000302273 KTN1-AS1Q86SY8 53 aa4.01□□□□□ -1.77
VPREB1-201ENST00000302273 KRTAP3-2Q9BYR7 98 aa4.01□□□□□ -1.77
VPREB1-201ENST00000302273 LCE2BO14633 110 aa4□□□□□ -1.77
VPREB1-201ENST00000302273 MACF1Q9UPN3 7388 aaKnown RBP4□□□□□ -1.77
VPREB1-201ENST00000302273 KRTAP19-1Q8IUB9 90 aa3.99□□□□□ -1.77
VPREB1-201ENST00000302273 M0QZ58 72 aa3.96□□□□□ -1.78
VPREB1-201ENST00000302273 KRTAP19-8Q3LI54 63 aa3.96□□□□□ -1.78
VPREB1-201ENST00000302273 R4GN34 69 aa3.96□□□□□ -1.78
VPREB1-201ENST00000302273 P0C880 135 aa3.94□□□□□ -1.78
VPREB1-201ENST00000302273 KRTAP13-4Q3LI77 160 aa3.92□□□□□ -1.78
VPREB1-201ENST00000302273 KRTAP19-6Q3LI70 58 aa3.89□□□□□ -1.79
VPREB1-201ENST00000302273 K7ERS5 55 aa3.88□□□□□ -1.79
VPREB1-201ENST00000302273 MT1BP07438 61 aa3.87□□□□□ -1.79
VPREB1-201ENST00000302273 A0A0D9SG42 100 aa3.85□□□□□ -1.79
VPREB1-201ENST00000302273 PLAC4Q8WY50 150 aa3.85□□□□□ -1.79
VPREB1-201ENST00000302273 PRAC1Q96KF2 57 aa3.85□□□□□ -1.79
VPREB1-201ENST00000302273 NEBP20929 6669 aa3.8□□□□□ -1.8
VPREB1-201ENST00000302273 PRO2289Q9P1D8 64 aa3.8□□□□□ -1.8
VPREB1-201ENST00000302273 KRTAP12-1P59990 96 aa3.78□□□□□ -1.8
VPREB1-201ENST00000302273 KRTAP12-2P59991 146 aa3.78□□□□□ -1.8
VPREB1-201ENST00000302273 LINC01554Q52M75 96 aa3.78□□□□□ -1.8
VPREB1-201ENST00000302273 MUC12Q9UKN1 5478 aa3.78□□□□□ -1.8
VPREB1-201ENST00000302273 KRTAP10-5P60370 271 aa3.77□□□□□ -1.81
VPREB1-201ENST00000302273 ROMO1P60602 79 aa3.77□□□□□ -1.81
VPREB1-201ENST00000302273 KRTAP6-3Q3LI67 103 aa3.76□□□□□ -1.81
VPREB1-201ENST00000302273 SPINT4Q6UDR6 99 aa3.74□□□□□ -1.81
VPREB1-201ENST00000302273 KRTAP25-1Q3LHN0 102 aa3.72□□□□□ -1.81
VPREB1-201ENST00000302273 MT1XP80297 61 aa3.69□□□□□ -1.82
VPREB1-201ENST00000302273 CAMK2N1Q7Z7J9 78 aa3.67□□□□□ -1.82
VPREB1-201ENST00000302273 MDN1Q9NU22 5596 aa3.66□□□□□ -1.82
VPREB1-201ENST00000302273 KRTAP20-1Q3LI63 56 aa3.63□□□□□ -1.83
VPREB1-201ENST00000302273 KMT2DO14686 5537 aa3.58□□□□□ -1.84
VPREB1-201ENST00000302273 C10orf95Q9H7T3 257 aa3.58□□□□□ -1.84
VPREB1-201ENST00000302273 KRTAP10-12P60413 245 aa3.55□□□□□ -1.84
VPREB1-201ENST00000302273 KRTAP5-9P26371 169 aa3.5□□□□□ -1.85
VPREB1-201ENST00000302273 KRTAP10-7P60409 375 aaPredicted RBP3.49□□□□□ -1.85
VPREB1-201ENST00000302273 TNP1P09430 55 aa3.47□□□□□ -1.85
VPREB1-201ENST00000302273 KRTAP2-3P0C7H8 128 aa3.46□□□□□ -1.86
VPREB1-201ENST00000302273 KRTAP8-1Q8IUC2 63 aa3.46□□□□□ -1.86
VPREB1-201ENST00000302273 KRTAP2-4Q9BYR9 128 aa3.46□□□□□ -1.86
VPREB1-201ENST00000302273 PP632Q6XCG6 107 aa3.43□□□□□ -1.86
VPREB1-201ENST00000302273 KRTAP4-8A0A0G2JLE6 195 aa3.41□□□□□ -1.86
VPREB1-201ENST00000302273 KRTAP4-8Q9BYQ9 185 aa3.41□□□□□ -1.86
VPREB1-201ENST00000302273 KRTAP23-1A1A580 65 aa3.39□□□□□ -1.87
VPREB1-201ENST00000302273 SPRR2FQ96RM1 72 aa3.37□□□□□ -1.87
VPREB1-201ENST00000302273 KRTAP15-1Q3LI76 137 aa3.35□□□□□ -1.87
VPREB1-201ENST00000302273 GPR98Q8WXG9 6306 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms