RNA–Protein interactions for RNA: ENST00000302206.9

TPM3-202, Transcript of tropomyosin 3, humanhuman

TSL 3 BASIC

Gene TPM3, Length 741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-202ENST00000302206 A8MUN3 132 aa6.35□□□□□ -1.39
TPM3-202ENST00000302206 SPINK7P58062 85 aa6.35□□□□□ -1.39
TPM3-202ENST00000302206 FAT4Q6V0I7 4981 aa6.33□□□□□ -1.4
TPM3-202ENST00000302206 Q1T7F1 81 aa6.33□□□□□ -1.4
TPM3-202ENST00000302206 V9GYY9 64 aa6.32□□□□□ -1.4
TPM3-202ENST00000302206 C4orf26Q17RF5 130 aa6.27□□□□□ -1.41
TPM3-202ENST00000302206 MPLKIPQ8TAP9 179 aa6.27□□□□□ -1.41
TPM3-202ENST00000302206 CHKB-CPT1BH3BT56 60 aa6.26□□□□□ -1.41
TPM3-202ENST00000302206 COX6B2Q6YFQ2 88 aa6.24□□□□□ -1.41
TPM3-202ENST00000302206 KRTAP3-1Q9BYR8 98 aa6.21□□□□□ -1.42
TPM3-202ENST00000302206 LINC01558Q9Y6Z2 57 aa6.21□□□□□ -1.42
TPM3-202ENST00000302206 SEC61BP60468 96 aaKnown RBP6.17□□□□□ -1.42
TPM3-202ENST00000302206 SPTSSBQ8NFR3 76 aa6.17□□□□□ -1.42
TPM3-202ENST00000302206 KRTAP19-4Q3LI73 84 aa6.16□□□□□ -1.42
TPM3-202ENST00000302206 PSPHP1O15172 72 aa6.13□□□□□ -1.43
TPM3-202ENST00000302206 PRR15LQ9BU68 103 aa6.13□□□□□ -1.43
TPM3-202ENST00000302206 Q5VV11 94 aa6.12□□□□□ -1.43
TPM3-202ENST00000302206 LOC100996750A0A140TA64 210 aa6.11□□□□□ -1.43
TPM3-202ENST00000302206 KRTAP4-6Q9BYQ5 205 aa6.11□□□□□ -1.43
TPM3-202ENST00000302206 RBM12B-AS1Q9P1G2 102 aa6.07□□□□□ -1.44
TPM3-202ENST00000302206 CRCT1Q9UGL9 99 aa6.07□□□□□ -1.44
TPM3-202ENST00000302206 H1FX-AS1Q4G0G2 97 aa6.06□□□□□ -1.44
TPM3-202ENST00000302206 FSIP2Q5CZC0 6907 aa6.06□□□□□ -1.44
TPM3-202ENST00000302206 A0A1B0GU69 56 aa6.05□□□□□ -1.44
TPM3-202ENST00000302206 S4R3F8 94 aa6.02□□□□□ -1.45
TPM3-202ENST00000302206 SEC61GP60059 68 aa6□□□□□ -1.45
TPM3-202ENST00000302206 MUC17Q685J3 4493 aa6□□□□□ -1.45
TPM3-202ENST00000302206 LCA10Q71F78 164 aa5.99□□□□□ -1.45
TPM3-202ENST00000302206 A6NED7 52 aa5.97□□□□□ -1.45
TPM3-202ENST00000302206 BRK1Q8WUW1 75 aa5.97□□□□□ -1.45
TPM3-202ENST00000302206 KRTAP4-1Q9BYQ7 146 aa5.97□□□□□ -1.45
TPM3-202ENST00000302206 PRO0628Q9UI54 55 aa5.95□□□□□ -1.46
TPM3-202ENST00000302206 CDC42SE1Q9NRR8 79 aa5.92□□□□□ -1.46
TPM3-202ENST00000302206 UQCR11O14957 56 aa5.9□□□□□ -1.46
TPM3-202ENST00000302206 KRTAP19-2Q3LHN2 52 aa5.88□□□□□ -1.47
TPM3-202ENST00000302206 CSAG1Q6PB30 78 aa5.88□□□□□ -1.47
TPM3-202ENST00000302206 SPATA8Q6RVD6 105 aa5.87□□□□□ -1.47
TPM3-202ENST00000302206 A0A1B0GU33 70 aa5.84□□□□□ -1.47
TPM3-202ENST00000302206 MIR22HGQ0VDD5 57 aa5.83□□□□□ -1.48
TPM3-202ENST00000302206 H0YAA0 97 aa5.82□□□□□ -1.48
TPM3-202ENST00000302206 KRTAP10-6P60371 365 aaPredicted RBP5.82□□□□□ -1.48
TPM3-202ENST00000302206 A8MU10 97 aa5.8□□□□□ -1.48
TPM3-202ENST00000302206 KRTAP9-7A8MTY7 169 aa5.75□□□□□ -1.49
TPM3-202ENST00000302206 ADM2Q7Z4H4 148 aa5.75□□□□□ -1.49
TPM3-202ENST00000302206 P0C880 135 aa5.72□□□□□ -1.49
TPM3-202ENST00000302206 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.67□□□□□ -1.5
TPM3-202ENST00000302206 PMAIP1Q13794 54 aa5.67□□□□□ -1.5
TPM3-202ENST00000302206 M0QZ58 72 aa5.66□□□□□ -1.5
TPM3-202ENST00000302206 A6NN06 94 aa5.65□□□□□ -1.5
TPM3-202ENST00000302206 KRTAP13-4Q3LI77 160 aa5.64□□□□□ -1.51
TPM3-202ENST00000302206 KRTAP4-8Q9BYQ9 185 aa5.64□□□□□ -1.51
TPM3-202ENST00000302206 MT1HP80294 61 aa5.63□□□□□ -1.51
TPM3-202ENST00000302206 FLGP20930 4061 aaPredicted RBP5.62□□□□□ -1.51
TPM3-202ENST00000302206 K7ERS5 55 aa5.58□□□□□ -1.52
TPM3-202ENST00000302206 KRTAP15-1Q3LI76 137 aa5.57□□□□□ -1.52
TPM3-202ENST00000302206 M0R2T5 61 aa5.55□□□□□ -1.52
TPM3-202ENST00000302206 SSPOA2VEC9 5147 aa5.54□□□□□ -1.52
TPM3-202ENST00000302206 R4GN34 69 aa5.54□□□□□ -1.52
TPM3-202ENST00000302206 A0A0D9SG42 100 aa5.53□□□□□ -1.52
TPM3-202ENST00000302206 CRIPTQ9P021 101 aa5.53□□□□□ -1.52
TPM3-202ENST00000302206 USH2AO75445 5202 aa5.52□□□□□ -1.53
TPM3-202ENST00000302206 KTN1-AS1Q86SY8 53 aa5.49□□□□□ -1.53
TPM3-202ENST00000302206 KRTAP12-1P59990 96 aa5.47□□□□□ -1.53
TPM3-202ENST00000302206 KRTAP4-12Q9BQ66 201 aa5.44□□□□□ -1.54
TPM3-202ENST00000302206 KRTAP12-2P59991 146 aa5.43□□□□□ -1.54
TPM3-202ENST00000302206 PRAC1Q96KF2 57 aa5.42□□□□□ -1.54
TPM3-202ENST00000302206 SPINT4Q6UDR6 99 aa5.4□□□□□ -1.54
TPM3-202ENST00000302206 LINC01554Q52M75 96 aa5.39□□□□□ -1.55
TPM3-202ENST00000302206 FCGBPQ9Y6R7 5405 aaPredicted RBP5.38□□□□□ -1.55
TPM3-202ENST00000302206 LCE3BQ5TA77 95 aa5.37□□□□□ -1.55
TPM3-202ENST00000302206 KRTAP19-1Q8IUB9 90 aa5.37□□□□□ -1.55
TPM3-202ENST00000302206 KRTAP9-8Q9BYQ0 159 aa5.37□□□□□ -1.55
TPM3-202ENST00000302206 SYNE2Q8WXH0 6885 aaKnown RBP5.37□□□□□ -1.55
TPM3-202ENST00000302206 MT2AP02795 61 aa5.36□□□□□ -1.55
TPM3-202ENST00000302206 ROMO1P60602 79 aa5.36□□□□□ -1.55
TPM3-202ENST00000302206 MACF1Q9UPN3 7388 aaKnown RBP5.35□□□□□ -1.55
TPM3-202ENST00000302206 SPRR2GQ9BYE4 73 aa5.35□□□□□ -1.55
TPM3-202ENST00000302206 MT1FP04733 61 aa5.32□□□□□ -1.56
TPM3-202ENST00000302206 KRTAP10-10P60014 251 aa5.31□□□□□ -1.56
TPM3-202ENST00000302206 KRTAP9-9Q9BYP9 154 aa5.28□□□□□ -1.56
TPM3-202ENST00000302206 KRTAP9-4Q9BYQ2 154 aa5.28□□□□□ -1.56
TPM3-202ENST00000302206 LCE4AQ5TA78 99 aa5.25□□□□□ -1.57
TPM3-202ENST00000302206 KRTAP19-8Q3LI54 63 aa5.2□□□□□ -1.58
TPM3-202ENST00000302206 CAMK2N1Q7Z7J9 78 aa5.2□□□□□ -1.58
TPM3-202ENST00000302206 PLAC4Q8WY50 150 aa5.18□□□□□ -1.58
TPM3-202ENST00000302206 KRTAP9-3Q9BYQ3 159 aa5.18□□□□□ -1.58
TPM3-202ENST00000302206 KRTAP25-1Q3LHN0 102 aa5.17□□□□□ -1.58
TPM3-202ENST00000302206 KRTAP4-8A0A0G2JLE6 195 aa5.16□□□□□ -1.58
TPM3-202ENST00000302206 C10orf95Q9H7T3 257 aa5.16□□□□□ -1.58
TPM3-202ENST00000302206 KRTAP6-3Q3LI67 103 aa5.15□□□□□ -1.59
TPM3-202ENST00000302206 MT1BP07438 61 aa5.08□□□□□ -1.6
TPM3-202ENST00000302206 KRTAP19-6Q3LI70 58 aa5.08□□□□□ -1.6
TPM3-202ENST00000302206 NEBP20929 6669 aa5.05□□□□□ -1.6
TPM3-202ENST00000302206 LCE1DQ5T752 114 aa5.04□□□□□ -1.6
TPM3-202ENST00000302206 KRTAP20-1Q3LI63 56 aa5.01□□□□□ -1.61
TPM3-202ENST00000302206 TNP1P09430 55 aa5□□□□□ -1.61
TPM3-202ENST00000302206 NDUFAF8A1L188 74 aa4.98□□□□□ -1.61
TPM3-202ENST00000302206 LCE5AQ5TCM9 118 aa4.98□□□□□ -1.61
TPM3-202ENST00000302206 KRTAP4-7Q9BYR0 210 aa4.98□□□□□ -1.61
TPM3-202ENST00000302206 MUC12Q9UKN1 5478 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms