RNA–Protein interactions for RNA: ENST00000300302.9

HERPUD1-201, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERPUD1, Length 1,862 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-201ENST00000300302 PRR15LQ9BU68 103 aa7.95□□□□□ -1.14
HERPUD1-201ENST00000300302 H1FX-AS1Q4G0G2 97 aa7.92□□□□□ -1.14
HERPUD1-201ENST00000300302 KRTAP4-1Q9BYQ7 146 aa7.91□□□□□ -1.14
HERPUD1-201ENST00000300302 S4R3F8 94 aa7.88□□□□□ -1.15
HERPUD1-201ENST00000300302 LCA10Q71F78 164 aa7.85□□□□□ -1.15
HERPUD1-201ENST00000300302 BRK1Q8WUW1 75 aa7.83□□□□□ -1.16
HERPUD1-201ENST00000300302 A0A1B0GU69 56 aa7.82□□□□□ -1.16
HERPUD1-201ENST00000300302 UBR4Q5T4S7 5183 aa7.8□□□□□ -1.16
HERPUD1-201ENST00000300302 KRTAP3-3Q9BYR6 98 aa7.79□□□□□ -1.16
HERPUD1-201ENST00000300302 SEC61GP60059 68 aa7.79□□□□□ -1.16
HERPUD1-201ENST00000300302 PRO0628Q9UI54 55 aa7.78□□□□□ -1.16
HERPUD1-201ENST00000300302 MUC2Q02817 5179 aa7.77□□□□□ -1.17
HERPUD1-201ENST00000300302 A6NED7 52 aa7.73□□□□□ -1.17
HERPUD1-201ENST00000300302 RNF213Q63HN8 5207 aa7.73□□□□□ -1.17
HERPUD1-201ENST00000300302 CSAG1Q6PB30 78 aa7.7□□□□□ -1.18
HERPUD1-201ENST00000300302 A8MU10 97 aa7.69□□□□□ -1.18
HERPUD1-201ENST00000300302 KRTAP19-2Q3LHN2 52 aa7.69□□□□□ -1.18
HERPUD1-201ENST00000300302 SVIPQ8NHG7 77 aa7.68□□□□□ -1.18
HERPUD1-201ENST00000300302 CDC42SE1Q9NRR8 79 aa7.64□□□□□ -1.19
HERPUD1-201ENST00000300302 UQCR11O14957 56 aa7.6□□□□□ -1.19
HERPUD1-201ENST00000300302 A0A1B0GU33 70 aa7.55□□□□□ -1.2
HERPUD1-201ENST00000300302 H0YAA0 97 aa7.53□□□□□ -1.2
HERPUD1-201ENST00000300302 SPATA8Q6RVD6 105 aa7.53□□□□□ -1.2
HERPUD1-201ENST00000300302 KRTAP10-6P60371 365 aaPredicted RBP7.53□□□□□ -1.2
HERPUD1-201ENST00000300302 ADM2Q7Z4H4 148 aa7.53□□□□□ -1.2
HERPUD1-201ENST00000300302 KRTAP3-2Q9BYR7 98 aa7.53□□□□□ -1.2
HERPUD1-201ENST00000300302 LCE2CQ5TA81 110 aa7.52□□□□□ -1.21
HERPUD1-201ENST00000300302 MIR22HGQ0VDD5 57 aa7.51□□□□□ -1.21
HERPUD1-201ENST00000300302 FAT4Q6V0I7 4981 aa7.48□□□□□ -1.21
HERPUD1-201ENST00000300302 FLGP20930 4061 aaPredicted RBP7.47□□□□□ -1.21
HERPUD1-201ENST00000300302 P0C880 135 aa7.47□□□□□ -1.21
HERPUD1-201ENST00000300302 MT1HP80294 61 aa7.38□□□□□ -1.23
HERPUD1-201ENST00000300302 PMAIP1Q13794 54 aa7.38□□□□□ -1.23
HERPUD1-201ENST00000300302 A6NN06 94 aa7.37□□□□□ -1.23
HERPUD1-201ENST00000300302 M0R2T5 61 aa7.36□□□□□ -1.23
HERPUD1-201ENST00000300302 M0QZ58 72 aa7.34□□□□□ -1.23
HERPUD1-201ENST00000300302 KRTAP13-4Q3LI77 160 aa7.32□□□□□ -1.24
HERPUD1-201ENST00000300302 R4GN34 69 aa7.28□□□□□ -1.24
HERPUD1-201ENST00000300302 A0A0D9SG42 100 aa7.23□□□□□ -1.25
HERPUD1-201ENST00000300302 LORP23490 312 aaPredicted RBP7.21□□□□□ -1.25
HERPUD1-201ENST00000300302 K7ERS5 55 aa7.2□□□□□ -1.26
HERPUD1-201ENST00000300302 CRIPTQ9P021 101 aa7.2□□□□□ -1.26
HERPUD1-201ENST00000300302 LCE2AQ5TA79 106 aaPredicted RBP7.19□□□□□ -1.26
HERPUD1-201ENST00000300302 KTN1-AS1Q86SY8 53 aa7.17□□□□□ -1.26
HERPUD1-201ENST00000300302 LINC01554Q52M75 96 aa7.13□□□□□ -1.27
HERPUD1-201ENST00000300302 KRTAP9-8Q9BYQ0 159 aa7.1□□□□□ -1.27
HERPUD1-201ENST00000300302 LCE2DQ5TA82 110 aaPredicted RBP7.09□□□□□ -1.27
HERPUD1-201ENST00000300302 MT2AP02795 61 aa7.09□□□□□ -1.28
HERPUD1-201ENST00000300302 SPINT4Q6UDR6 99 aa7.08□□□□□ -1.28
HERPUD1-201ENST00000300302 KRTAP12-1P59990 96 aa7.07□□□□□ -1.28
HERPUD1-201ENST00000300302 KRTAP10-10P60014 251 aa7.07□□□□□ -1.28
HERPUD1-201ENST00000300302 KRTAP12-2P59991 146 aa7.05□□□□□ -1.28
HERPUD1-201ENST00000300302 MT1FP04733 61 aa7.04□□□□□ -1.28
HERPUD1-201ENST00000300302 SPRR2GQ9BYE4 73 aa7□□□□□ -1.29
HERPUD1-201ENST00000300302 PRAC1Q96KF2 57 aa6.95□□□□□ -1.3
HERPUD1-201ENST00000300302 KRTAP19-1Q8IUB9 90 aa6.94□□□□□ -1.3
HERPUD1-201ENST00000300302 ROMO1P60602 79 aa6.87□□□□□ -1.31
HERPUD1-201ENST00000300302 KRTAP9-3Q9BYQ3 159 aa6.84□□□□□ -1.31
HERPUD1-201ENST00000300302 CAMK2N1Q7Z7J9 78 aa6.83□□□□□ -1.32
HERPUD1-201ENST00000300302 PLAC4Q8WY50 150 aa6.83□□□□□ -1.32
HERPUD1-201ENST00000300302 KRTAP19-8Q3LI54 63 aa6.79□□□□□ -1.32
HERPUD1-201ENST00000300302 KRTAP25-1Q3LHN0 102 aa6.71□□□□□ -1.34
HERPUD1-201ENST00000300302 LCE2BO14633 110 aa6.69□□□□□ -1.34
HERPUD1-201ENST00000300302 MT1BP07438 61 aa6.68□□□□□ -1.34
HERPUD1-201ENST00000300302 C10orf95Q9H7T3 257 aa6.68□□□□□ -1.34
HERPUD1-201ENST00000300302 USH2AO75445 5202 aa6.54□□□□□ -1.36
HERPUD1-201ENST00000300302 TNP1P09430 55 aa6.51□□□□□ -1.37
HERPUD1-201ENST00000300302 MT1XP80297 61 aa6.49□□□□□ -1.37
HERPUD1-201ENST00000300302 KRTAP10-5P60370 271 aa6.48□□□□□ -1.37
HERPUD1-201ENST00000300302 PRO2289Q9P1D8 64 aa6.48□□□□□ -1.37
HERPUD1-201ENST00000300302 KRTAP9-2Q9BYQ4 174 aa6.43□□□□□ -1.38
HERPUD1-201ENST00000300302 PP632Q6XCG6 107 aa6.37□□□□□ -1.39
HERPUD1-201ENST00000300302 FSIP2Q5CZC0 6907 aa6.36□□□□□ -1.39
HERPUD1-201ENST00000300302 SSPOA2VEC9 5147 aa6.36□□□□□ -1.39
HERPUD1-201ENST00000300302 KRTAP23-1A1A580 65 aa6.33□□□□□ -1.4
HERPUD1-201ENST00000300302 KRTAP19-6Q3LI70 58 aa6.28□□□□□ -1.4
HERPUD1-201ENST00000300302 KRTAP10-7P60409 375 aaPredicted RBP6.23□□□□□ -1.41
HERPUD1-201ENST00000300302 KRTAP10-12P60413 245 aa6.21□□□□□ -1.42
HERPUD1-201ENST00000300302 LCE3AQ5TA76 89 aa6.18□□□□□ -1.42
HERPUD1-201ENST00000300302 CRCT1Q9UGL9 99 aa6.17□□□□□ -1.42
HERPUD1-201ENST00000300302 FCGBPQ9Y6R7 5405 aaPredicted RBP6.1□□□□□ -1.43
HERPUD1-201ENST00000300302 KRTAP8-1Q8IUC2 63 aa6.07□□□□□ -1.44
HERPUD1-201ENST00000300302 KRTAP15-1Q3LI76 137 aa6.02□□□□□ -1.44
HERPUD1-201ENST00000300302 KRTAP9-6A0A140TA67 174 aa5.97□□□□□ -1.45
HERPUD1-201ENST00000300302 KRTAP4-8A0A0G2JLE6 195 aa5.96□□□□□ -1.46
HERPUD1-201ENST00000300302 KRTAP4-8Q9BYQ9 185 aa5.96□□□□□ -1.46
HERPUD1-201ENST00000300302 KRTAP12-3P60328 96 aa5.95□□□□□ -1.46
HERPUD1-201ENST00000300302 KMT2DO14686 5537 aa5.94□□□□□ -1.46
HERPUD1-201ENST00000300302 KRTAP19-5Q3LI72 72 aa5.88□□□□□ -1.47
HERPUD1-201ENST00000300302 MACF1Q9UPN3 7388 aaKnown RBP5.82□□□□□ -1.48
HERPUD1-201ENST00000300302 KRTAP19-7Q3SYF9 63 aa5.78□□□□□ -1.48
HERPUD1-201ENST00000300302 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.72□□□□□ -1.49
HERPUD1-201ENST00000300302 SPRR5A0A1B0GTR4 108 aa5.71□□□□□ -1.5
HERPUD1-201ENST00000300302 MT1EP04732 61 aa5.68□□□□□ -1.5
HERPUD1-201ENST00000300302 SYNE2Q8WXH0 6885 aaKnown RBP5.67□□□□□ -1.5
HERPUD1-201ENST00000300302 H3BS24 57 aa5.66□□□□□ -1.5
HERPUD1-201ENST00000300302 NDUFAF8A1L188 74 aa5.63□□□□□ -1.51
HERPUD1-201ENST00000300302 KRTAP19-4Q3LI73 84 aa5.6□□□□□ -1.51
HERPUD1-201ENST00000300302 SPRR2FQ96RM1 72 aa5.59□□□□□ -1.51
HERPUD1-201ENST00000300302 MT1LQ93083 61 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms