RNA–Protein interactions for RNA: ENST00000272139.4

C1orf35-201, Transcript of chromosome 1 open reading frame 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C1orf35, Length 1,427 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf35-201ENST00000272139 KRTAP9-8Q9BYQ0 159 aa10.95□□□□□ -0.66
C1orf35-201ENST00000272139 CSAG1Q6PB30 78 aa10.93□□□□□ -0.66
C1orf35-201ENST00000272139 DMAC1Q96GE9 116 aa10.93□□□□□ -0.66
C1orf35-201ENST00000272139 KRTAP3-3Q9BYR6 98 aa10.87□□□□□ -0.67
C1orf35-201ENST00000272139 NDUFC1O43677 76 aa10.86□□□□□ -0.67
C1orf35-201ENST00000272139 MT2AP02795 61 aa10.85□□□□□ -0.67
C1orf35-201ENST00000272139 SPANXA2-OT1Q8N9U9 137 aa10.84□□□□□ -0.67
C1orf35-201ENST00000272139 ACYP2P14621 99 aa10.83□□□□□ -0.68
C1orf35-201ENST00000272139 KRTAP10-10P60014 251 aa10.8□□□□□ -0.68
C1orf35-201ENST00000272139 MT1FP04733 61 aa10.77□□□□□ -0.68
C1orf35-201ENST00000272139 CYSTM1Q9H1C7 97 aa10.72□□□□□ -0.69
C1orf35-201ENST00000272139 CCDC179H3BU77 68 aa10.71□□□□□ -0.69
C1orf35-201ENST00000272139 H7BZZ5 65 aa10.71□□□□□ -0.69
C1orf35-201ENST00000272139 CHKB-CPT1BH3BT56 60 aa10.64□□□□□ -0.71
C1orf35-201ENST00000272139 USH2AO75445 5202 aa10.64□□□□□ -0.71
C1orf35-201ENST00000272139 SPTSSBQ8NFR3 76 aa10.59□□□□□ -0.71
C1orf35-201ENST00000272139 KRTAP9-3Q9BYQ3 159 aa10.59□□□□□ -0.71
C1orf35-201ENST00000272139 H0YAA0 97 aa10.56□□□□□ -0.72
C1orf35-201ENST00000272139 SSPOA2VEC9 5147 aa10.52□□□□□ -0.73
C1orf35-201ENST00000272139 LCE2BO14633 110 aa10.51□□□□□ -0.73
C1orf35-201ENST00000272139 COA5Q86WW8 74 aa10.5□□□□□ -0.73
C1orf35-201ENST00000272139 ADM2Q7Z4H4 148 aa10.49□□□□□ -0.73
C1orf35-201ENST00000272139 ATP5EP56381 51 aaPredicted RBP10.41□□□□□ -0.74
C1orf35-201ENST00000272139 CRIPTQ9P021 101 aa10.38□□□□□ -0.75
C1orf35-201ENST00000272139 KRTAP19-1Q8IUB9 90 aa10.35□□□□□ -0.75
C1orf35-201ENST00000272139 TMEM258P61165 79 aa10.34□□□□□ -0.75
C1orf35-201ENST00000272139 P0C880 135 aa10.32□□□□□ -0.76
C1orf35-201ENST00000272139 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.31□□□□□ -0.76
C1orf35-201ENST00000272139 SPRR2GQ9BYE4 73 aa10.31□□□□□ -0.76
C1orf35-201ENST00000272139 KRTAP3-2Q9BYR7 98 aa10.31□□□□□ -0.76
C1orf35-201ENST00000272139 FCGBPQ9Y6R7 5405 aaPredicted RBP10.3□□□□□ -0.76
C1orf35-201ENST00000272139 PCP4P48539 62 aa10.2□□□□□ -0.78
C1orf35-201ENST00000272139 R4GN34 69 aa10.2□□□□□ -0.78
C1orf35-201ENST00000272139 KRTAP19-6Q3LI70 58 aa10.19□□□□□ -0.78
C1orf35-201ENST00000272139 KRTAP9-7A8MTY7 169 aa10.17□□□□□ -0.78
C1orf35-201ENST00000272139 SEC61GP60059 68 aa10.15□□□□□ -0.79
C1orf35-201ENST00000272139 M0QZ58 72 aa10.13□□□□□ -0.79
C1orf35-201ENST00000272139 KRTAP19-8Q3LI54 63 aa10.13□□□□□ -0.79
C1orf35-201ENST00000272139 Q5VV11 94 aa10.12□□□□□ -0.79
C1orf35-201ENST00000272139 SERP1Q9Y6X1 66 aa10.11□□□□□ -0.79
C1orf35-201ENST00000272139 MT1BP07438 61 aa10.04□□□□□ -0.8
C1orf35-201ENST00000272139 MACF1Q9UPN3 7388 aaKnown RBP9.99□□□□□ -0.81
C1orf35-201ENST00000272139 A0A1B0GU69 56 aa9.98□□□□□ -0.81
C1orf35-201ENST00000272139 LINC01554Q52M75 96 aa9.97□□□□□ -0.81
C1orf35-201ENST00000272139 A0A1B0GU33 70 aa9.89□□□□□ -0.83
C1orf35-201ENST00000272139 LINC01558Q9Y6Z2 57 aa9.88□□□□□ -0.83
C1orf35-201ENST00000272139 PLAC4Q8WY50 150 aa9.87□□□□□ -0.83
C1orf35-201ENST00000272139 PRR15LQ9BU68 103 aa9.87□□□□□ -0.83
C1orf35-201ENST00000272139 SYNE2Q8WXH0 6885 aaKnown RBP9.86□□□□□ -0.83
C1orf35-201ENST00000272139 KRTAP13-4Q3LI77 160 aa9.86□□□□□ -0.83
C1orf35-201ENST00000272139 A6NN06 94 aa9.76□□□□□ -0.85
C1orf35-201ENST00000272139 SPATA8Q6RVD6 105 aa9.75□□□□□ -0.85
C1orf35-201ENST00000272139 KRTAP10-5P60370 271 aa9.7□□□□□ -0.86
C1orf35-201ENST00000272139 V9GYY9 64 aa9.7□□□□□ -0.86
C1orf35-201ENST00000272139 RPS28P62857 69 aaKnown RBP9.69□□□□□ -0.86
C1orf35-201ENST00000272139 SMIM26A0A096LP01 95 aa9.67□□□□□ -0.86
C1orf35-201ENST00000272139 KRTAP6-3Q3LI67 103 aa9.67□□□□□ -0.86
C1orf35-201ENST00000272139 A0A0D9SG42 100 aa9.66□□□□□ -0.86
C1orf35-201ENST00000272139 Q1T7F1 81 aa9.65□□□□□ -0.87
C1orf35-201ENST00000272139 PRO2289Q9P1D8 64 aa9.62□□□□□ -0.87
C1orf35-201ENST00000272139 MT1XP80297 61 aa9.56□□□□□ -0.88
C1orf35-201ENST00000272139 UQCR11O14957 56 aa9.55□□□□□ -0.88
C1orf35-201ENST00000272139 PSPHP1O15172 72 aa9.54□□□□□ -0.88
C1orf35-201ENST00000272139 A8MU10 97 aa9.5□□□□□ -0.89
C1orf35-201ENST00000272139 SPINT4Q6UDR6 99 aa9.5□□□□□ -0.89
C1orf35-201ENST00000272139 CAMK2N1Q7Z7J9 78 aa9.48□□□□□ -0.89
C1orf35-201ENST00000272139 KRTAP12-1P59990 96 aa9.46□□□□□ -0.9
C1orf35-201ENST00000272139 KRTAP12-2P59991 146 aa9.39□□□□□ -0.91
C1orf35-201ENST00000272139 MIR22HGQ0VDD5 57 aa9.38□□□□□ -0.91
C1orf35-201ENST00000272139 MUC12Q9UKN1 5478 aa9.26□□□□□ -0.93
C1orf35-201ENST00000272139 A6NED7 52 aa9.26□□□□□ -0.93
C1orf35-201ENST00000272139 NEBP20929 6669 aa9.25□□□□□ -0.93
C1orf35-201ENST00000272139 KRTAP5-9P26371 169 aa9.24□□□□□ -0.93
C1orf35-201ENST00000272139 KRTAP10-7P60409 375 aaPredicted RBP9.14□□□□□ -0.95
C1orf35-201ENST00000272139 KMT2DO14686 5537 aa9.13□□□□□ -0.95
C1orf35-201ENST00000272139 K7ERS5 55 aa9.12□□□□□ -0.95
C1orf35-201ENST00000272139 KRTAP10-12P60413 245 aa9.09□□□□□ -0.95
C1orf35-201ENST00000272139 MDN1Q9NU22 5596 aa9.08□□□□□ -0.96
C1orf35-201ENST00000272139 C10orf95Q9H7T3 257 aa8.99□□□□□ -0.97
C1orf35-201ENST00000272139 KRTAP4-8A0A0G2JLE6 195 aa8.98□□□□□ -0.97
C1orf35-201ENST00000272139 KRTAP4-8Q9BYQ9 185 aa8.98□□□□□ -0.97
C1orf35-201ENST00000272139 KRTAP8-1Q8IUC2 63 aa8.97□□□□□ -0.97
C1orf35-201ENST00000272139 SPRR2FQ96RM1 72 aa8.97□□□□□ -0.97
C1orf35-201ENST00000272139 CDC42SE1Q9NRR8 79 aa8.97□□□□□ -0.97
C1orf35-201ENST00000272139 KRTAP20-1Q3LI63 56 aa8.94□□□□□ -0.98
C1orf35-201ENST00000272139 TNP1P09430 55 aa8.89□□□□□ -0.99
C1orf35-201ENST00000272139 SPRR2EP22531 72 aa8.83□□□□□ -1
C1orf35-201ENST00000272139 SPRR2BP35325 72 aa8.83□□□□□ -1
C1orf35-201ENST00000272139 SPRR2AP35326 72 aa8.83□□□□□ -1
C1orf35-201ENST00000272139 KRTAP2-3P0C7H8 128 aa8.72□□□□□ -1.01
C1orf35-201ENST00000272139 KRTAP2-4Q9BYR9 128 aa8.72□□□□□ -1.01
C1orf35-201ENST00000272139 LCE1AQ5T7P2 110 aa8.71□□□□□ -1.02
C1orf35-201ENST00000272139 KRTAP25-1Q3LHN0 102 aa8.67□□□□□ -1.02
C1orf35-201ENST00000272139 BRK1Q8WUW1 75 aa8.63□□□□□ -1.03
C1orf35-201ENST00000272139 LCE3AQ5TA76 89 aa8.6□□□□□ -1.03
C1orf35-201ENST00000272139 ROMO1P60602 79 aa8.58□□□□□ -1.04
C1orf35-201ENST00000272139 SPRR2DP22532 72 aa8.54□□□□□ -1.04
C1orf35-201ENST00000272139 KRTAP19-7Q3SYF9 63 aa8.54□□□□□ -1.04
C1orf35-201ENST00000272139 KRTAP19-5Q3LI72 72 aa8.5□□□□□ -1.05
C1orf35-201ENST00000272139 KRTAP2-2Q9BYT5 123 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms