RNA–Protein interactions for RNA: ENST00000225655.5

PFN1-201, Transcript of profilin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFN1, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFN1-201ENST00000225655 SSPOA2VEC9 5147 aa8.79□□□□□ -1
PFN1-201ENST00000225655 LCE2BO14633 110 aa8.77□□□□□ -1.01
PFN1-201ENST00000225655 SERP2Q8N6R1 65 aa8.71□□□□□ -1.02
PFN1-201ENST00000225655 KLKP1Q107X0 134 aa8.69□□□□□ -1.02
PFN1-201ENST00000225655 KRTAP19-1Q8IUB9 90 aa8.68□□□□□ -1.02
PFN1-201ENST00000225655 A8MUN3 132 aa8.66□□□□□ -1.02
PFN1-201ENST00000225655 KRTAP3-1Q9BYR8 98 aa8.64□□□□□ -1.03
PFN1-201ENST00000225655 S4R3F8 94 aa8.64□□□□□ -1.03
PFN1-201ENST00000225655 FCGBPQ9Y6R7 5405 aaPredicted RBP8.62□□□□□ -1.03
PFN1-201ENST00000225655 ANAPC13Q9BS18 74 aa8.61□□□□□ -1.03
PFN1-201ENST00000225655 C20orf197Q8N268 126 aa8.59□□□□□ -1.03
PFN1-201ENST00000225655 SNURFQ9Y675 71 aa8.57□□□□□ -1.04
PFN1-201ENST00000225655 COX7CP15954 63 aa8.56□□□□□ -1.04
PFN1-201ENST00000225655 CSAG1Q6PB30 78 aa8.53□□□□□ -1.04
PFN1-201ENST00000225655 LCA10Q71F78 164 aa8.53□□□□□ -1.04
PFN1-201ENST00000225655 KRTAP19-6Q3LI70 58 aa8.51□□□□□ -1.05
PFN1-201ENST00000225655 DMAC1Q96GE9 116 aa8.51□□□□□ -1.05
PFN1-201ENST00000225655 NDUFC1O43677 76 aa8.49□□□□□ -1.05
PFN1-201ENST00000225655 MACF1Q9UPN3 7388 aaKnown RBP8.47□□□□□ -1.05
PFN1-201ENST00000225655 ACYP2P14621 99 aa8.44□□□□□ -1.06
PFN1-201ENST00000225655 SPANXA2-OT1Q8N9U9 137 aa8.44□□□□□ -1.06
PFN1-201ENST00000225655 SYNE2Q8WXH0 6885 aaKnown RBP8.38□□□□□ -1.07
PFN1-201ENST00000225655 KRTAP3-3Q9BYR6 98 aa8.38□□□□□ -1.07
PFN1-201ENST00000225655 CCDC179H3BU77 68 aa8.37□□□□□ -1.07
PFN1-201ENST00000225655 CHKB-CPT1BH3BT56 60 aa8.34□□□□□ -1.07
PFN1-201ENST00000225655 SPTSSBQ8NFR3 76 aa8.33□□□□□ -1.08
PFN1-201ENST00000225655 H7BZZ5 65 aa8.28□□□□□ -1.08
PFN1-201ENST00000225655 RPS28P62857 69 aaKnown RBP8.28□□□□□ -1.08
PFN1-201ENST00000225655 H0YAA0 97 aa8.25□□□□□ -1.09
PFN1-201ENST00000225655 CYSTM1Q9H1C7 97 aa8.23□□□□□ -1.09
PFN1-201ENST00000225655 KRTAP6-3Q3LI67 103 aa8.18□□□□□ -1.1
PFN1-201ENST00000225655 COA5Q86WW8 74 aa8.17□□□□□ -1.1
PFN1-201ENST00000225655 TMEM258P61165 79 aa8.16□□□□□ -1.1
PFN1-201ENST00000225655 ADM2Q7Z4H4 148 aa8.16□□□□□ -1.1
PFN1-201ENST00000225655 KRTAP3-2Q9BYR7 98 aa8.16□□□□□ -1.1
PFN1-201ENST00000225655 ATP5EP56381 51 aaPredicted RBP8.15□□□□□ -1.1
PFN1-201ENST00000225655 CRIPTQ9P021 101 aa8.14□□□□□ -1.11
PFN1-201ENST00000225655 SPRR2GQ9BYE4 73 aa8.09□□□□□ -1.11
PFN1-201ENST00000225655 MT1BP07438 61 aa8.08□□□□□ -1.12
PFN1-201ENST00000225655 Q5VV11 94 aa8.07□□□□□ -1.12
PFN1-201ENST00000225655 KRTAP19-8Q3LI54 63 aa8.06□□□□□ -1.12
PFN1-201ENST00000225655 A6NN06 94 aa8.05□□□□□ -1.12
PFN1-201ENST00000225655 NEBP20929 6669 aa7.97□□□□□ -1.13
PFN1-201ENST00000225655 P0C880 135 aa7.97□□□□□ -1.13
PFN1-201ENST00000225655 SEC61GP60059 68 aa7.97□□□□□ -1.13
PFN1-201ENST00000225655 R4GN34 69 aa7.97□□□□□ -1.13
PFN1-201ENST00000225655 KRTAP10-5P60370 271 aa7.94□□□□□ -1.14
PFN1-201ENST00000225655 SERP1Q9Y6X1 66 aa7.92□□□□□ -1.14
PFN1-201ENST00000225655 M0QZ58 72 aa7.9□□□□□ -1.14
PFN1-201ENST00000225655 PRO0628Q9UI54 55 aa7.83□□□□□ -1.16
PFN1-201ENST00000225655 SMIM26A0A096LP01 95 aa7.82□□□□□ -1.16
PFN1-201ENST00000225655 A0A1B0GU69 56 aa7.79□□□□□ -1.16
PFN1-201ENST00000225655 MUC12Q9UKN1 5478 aa7.79□□□□□ -1.16
PFN1-201ENST00000225655 KRTAP5-9P26371 169 aa7.76□□□□□ -1.17
PFN1-201ENST00000225655 LINC01554Q52M75 96 aa7.76□□□□□ -1.17
PFN1-201ENST00000225655 PRR15LQ9BU68 103 aa7.76□□□□□ -1.17
PFN1-201ENST00000225655 PLAC4Q8WY50 150 aa7.73□□□□□ -1.17
PFN1-201ENST00000225655 KRTAP20-1Q3LI63 56 aa7.71□□□□□ -1.18
PFN1-201ENST00000225655 A0A1B0GU33 70 aa7.7□□□□□ -1.18
PFN1-201ENST00000225655 LINC01558Q9Y6Z2 57 aa7.67□□□□□ -1.18
PFN1-201ENST00000225655 V9GYY9 64 aa7.6□□□□□ -1.19
PFN1-201ENST00000225655 KMT2DO14686 5537 aa7.59□□□□□ -1.19
PFN1-201ENST00000225655 KRTAP13-4Q3LI77 160 aa7.59□□□□□ -1.19
PFN1-201ENST00000225655 PRO2289Q9P1D8 64 aa7.59□□□□□ -1.19
PFN1-201ENST00000225655 SPATA8Q6RVD6 105 aa7.55□□□□□ -1.2
PFN1-201ENST00000225655 MT1XP80297 61 aa7.54□□□□□ -1.2
PFN1-201ENST00000225655 A0A0D9SG42 100 aa7.52□□□□□ -1.21
PFN1-201ENST00000225655 MDN1Q9NU22 5596 aa7.52□□□□□ -1.21
PFN1-201ENST00000225655 BRK1Q8WUW1 75 aa7.49□□□□□ -1.21
PFN1-201ENST00000225655 Q1T7F1 81 aa7.48□□□□□ -1.21
PFN1-201ENST00000225655 SPRR2FQ96RM1 72 aa7.46□□□□□ -1.22
PFN1-201ENST00000225655 UQCR11O14957 56 aa7.45□□□□□ -1.22
PFN1-201ENST00000225655 CAMK2N1Q7Z7J9 78 aa7.43□□□□□ -1.22
PFN1-201ENST00000225655 KRTAP2-3P0C7H8 128 aa7.42□□□□□ -1.22
PFN1-201ENST00000225655 KRTAP2-4Q9BYR9 128 aa7.42□□□□□ -1.22
PFN1-201ENST00000225655 KRTAP12-2P59991 146 aa7.41□□□□□ -1.22
PFN1-201ENST00000225655 SPINT4Q6UDR6 99 aa7.41□□□□□ -1.22
PFN1-201ENST00000225655 PSPHP1O15172 72 aa7.4□□□□□ -1.22
PFN1-201ENST00000225655 SPRR2EP22531 72 aa7.39□□□□□ -1.23
PFN1-201ENST00000225655 SPRR2BP35325 72 aa7.39□□□□□ -1.23
PFN1-201ENST00000225655 SPRR2AP35326 72 aa7.39□□□□□ -1.23
PFN1-201ENST00000225655 KRTAP8-1Q8IUC2 63 aa7.39□□□□□ -1.23
PFN1-201ENST00000225655 PMAIP1Q13794 54 aa7.35□□□□□ -1.23
PFN1-201ENST00000225655 A8MU10 97 aa7.34□□□□□ -1.23
PFN1-201ENST00000225655 KRTAP12-1P59990 96 aa7.32□□□□□ -1.24
PFN1-201ENST00000225655 MIR22HGQ0VDD5 57 aa7.31□□□□□ -1.24
PFN1-201ENST00000225655 LCE1AQ5T7P2 110 aa7.29□□□□□ -1.24
PFN1-201ENST00000225655 KRTAP4-8A0A0G2JLE6 195 aa7.25□□□□□ -1.25
PFN1-201ENST00000225655 KRTAP4-8Q9BYQ9 185 aa7.25□□□□□ -1.25
PFN1-201ENST00000225655 A6NED7 52 aa7.23□□□□□ -1.25
PFN1-201ENST00000225655 K7ERS5 55 aa7.2□□□□□ -1.26
PFN1-201ENST00000225655 KRTAP10-7P60409 375 aaPredicted RBP7.18□□□□□ -1.26
PFN1-201ENST00000225655 KRTAP10-12P60413 245 aa7.17□□□□□ -1.26
PFN1-201ENST00000225655 KRTAP2-2Q9BYT5 123 aa7.16□□□□□ -1.26
PFN1-201ENST00000225655 KRTAP2-1Q9BYU5 128 aa7.16□□□□□ -1.26
PFN1-201ENST00000225655 SPRR2DP22532 72 aa7.15□□□□□ -1.26
PFN1-201ENST00000225655 KTN1-AS1Q86SY8 53 aa7.14□□□□□ -1.27
PFN1-201ENST00000225655 CDC42SE1Q9NRR8 79 aa7.06□□□□□ -1.28
PFN1-201ENST00000225655 LCE3BQ5TA77 95 aa6.97□□□□□ -1.29
PFN1-201ENST00000225655 GPR98Q8WXG9 6306 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms