RNA–Protein interactions for RNA: ENST00000223129.8

RPA3-201, Transcript of replication protein A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPA3, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-201ENST00000223129 LOC100996750A0A140TA64 210 aa7.61□□□□□ -1.19
RPA3-201ENST00000223129 KRTAP4-6Q9BYQ5 205 aa7.61□□□□□ -1.19
RPA3-201ENST00000223129 PSPHP1O15172 72 aa7.61□□□□□ -1.19
RPA3-201ENST00000223129 LCE2AQ5TA79 106 aaPredicted RBP7.59□□□□□ -1.19
RPA3-201ENST00000223129 C7orf65Q6ZTY9 151 aa7.59□□□□□ -1.19
RPA3-201ENST00000223129 RBM12B-AS1Q9P1G2 102 aa7.57□□□□□ -1.2
RPA3-201ENST00000223129 A8MUN3 132 aa7.57□□□□□ -1.2
RPA3-201ENST00000223129 MT1HP80294 61 aa7.56□□□□□ -1.2
RPA3-201ENST00000223129 LCE2BO14633 110 aa7.54□□□□□ -1.2
RPA3-201ENST00000223129 FLGP20930 4061 aaPredicted RBP7.54□□□□□ -1.2
RPA3-201ENST00000223129 Q5VV11 94 aa7.54□□□□□ -1.2
RPA3-201ENST00000223129 COA5Q86WW8 74 aa7.54□□□□□ -1.2
RPA3-201ENST00000223129 PRR15LQ9BU68 103 aa7.49□□□□□ -1.21
RPA3-201ENST00000223129 LOC101927531A0A1B0GV80 90 aa7.47□□□□□ -1.21
RPA3-201ENST00000223129 CHKB-CPT1BH3BT56 60 aa7.46□□□□□ -1.22
RPA3-201ENST00000223129 M0R2T5 61 aa7.45□□□□□ -1.22
RPA3-201ENST00000223129 LINC01558Q9Y6Z2 57 aa7.42□□□□□ -1.22
RPA3-201ENST00000223129 PMAIP1Q13794 54 aa7.39□□□□□ -1.23
RPA3-201ENST00000223129 H1FX-AS1Q4G0G2 97 aa7.37□□□□□ -1.23
RPA3-201ENST00000223129 KRTAP3-1Q9BYR8 98 aa7.37□□□□□ -1.23
RPA3-201ENST00000223129 A6NED7 52 aa7.37□□□□□ -1.23
RPA3-201ENST00000223129 A8MU10 97 aa7.36□□□□□ -1.23
RPA3-201ENST00000223129 KRTAP10-6P60371 365 aaPredicted RBP7.35□□□□□ -1.23
RPA3-201ENST00000223129 LCA10Q71F78 164 aa7.34□□□□□ -1.24
RPA3-201ENST00000223129 CDC42SE1Q9NRR8 79 aa7.32□□□□□ -1.24
RPA3-201ENST00000223129 LORP23490 312 aaPredicted RBP7.32□□□□□ -1.24
RPA3-201ENST00000223129 ACYP2P14621 99 aa7.3□□□□□ -1.24
RPA3-201ENST00000223129 SPTSSBQ8NFR3 76 aa7.27□□□□□ -1.25
RPA3-201ENST00000223129 DMAC1Q96GE9 116 aa7.26□□□□□ -1.25
RPA3-201ENST00000223129 SEC61GP60059 68 aa7.23□□□□□ -1.25
RPA3-201ENST00000223129 KTN1-AS1Q86SY8 53 aa7.22□□□□□ -1.25
RPA3-201ENST00000223129 S4R3F8 94 aa7.22□□□□□ -1.25
RPA3-201ENST00000223129 A6NN06 94 aa7.21□□□□□ -1.26
RPA3-201ENST00000223129 KRTAP9-8Q9BYQ0 159 aa7.21□□□□□ -1.26
RPA3-201ENST00000223129 MT2AP02795 61 aa7.14□□□□□ -1.27
RPA3-201ENST00000223129 A0A1B0GU69 56 aa7.11□□□□□ -1.27
RPA3-201ENST00000223129 CSAG1Q6PB30 78 aa7.11□□□□□ -1.27
RPA3-201ENST00000223129 MT1FP04733 61 aa7.1□□□□□ -1.27
RPA3-201ENST00000223129 KRTAP10-10P60014 251 aa7.07□□□□□ -1.28
RPA3-201ENST00000223129 KRTAP9-2Q9BYQ4 174 aa7.06□□□□□ -1.28
RPA3-201ENST00000223129 SPATA8Q6RVD6 105 aa7.04□□□□□ -1.28
RPA3-201ENST00000223129 UQCR11O14957 56 aa7.01□□□□□ -1.29
RPA3-201ENST00000223129 MIR22HGQ0VDD5 57 aa6.98□□□□□ -1.29
RPA3-201ENST00000223129 KRTAP9-3Q9BYQ3 159 aa6.96□□□□□ -1.29
RPA3-201ENST00000223129 FSIP2Q5CZC0 6907 aa6.86□□□□□ -1.31
RPA3-201ENST00000223129 H0YAA0 97 aa6.86□□□□□ -1.31
RPA3-201ENST00000223129 ADM2Q7Z4H4 148 aa6.85□□□□□ -1.31
RPA3-201ENST00000223129 PRAC1Q96KF2 57 aa6.83□□□□□ -1.32
RPA3-201ENST00000223129 USH2AO75445 5202 aa6.82□□□□□ -1.32
RPA3-201ENST00000223129 KRTAP19-1Q8IUB9 90 aa6.79□□□□□ -1.32
RPA3-201ENST00000223129 KRTAP4-8Q9BYQ9 185 aa6.78□□□□□ -1.32
RPA3-201ENST00000223129 P0C880 135 aa6.76□□□□□ -1.33
RPA3-201ENST00000223129 SPRR2GQ9BYE4 73 aa6.74□□□□□ -1.33
RPA3-201ENST00000223129 CRIPTQ9P021 101 aa6.73□□□□□ -1.33
RPA3-201ENST00000223129 CRCT1Q9UGL9 99 aa6.73□□□□□ -1.33
RPA3-201ENST00000223129 A0A1B0GU33 70 aa6.71□□□□□ -1.33
RPA3-201ENST00000223129 SSPOA2VEC9 5147 aa6.7□□□□□ -1.34
RPA3-201ENST00000223129 KRTAP9-6A0A140TA67 174 aa6.69□□□□□ -1.34
RPA3-201ENST00000223129 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.68□□□□□ -1.34
RPA3-201ENST00000223129 LINC01554Q52M75 96 aa6.68□□□□□ -1.34
RPA3-201ENST00000223129 KRTAP19-8Q3LI54 63 aa6.63□□□□□ -1.35
RPA3-201ENST00000223129 R4GN34 69 aa6.63□□□□□ -1.35
RPA3-201ENST00000223129 M0QZ58 72 aa6.6□□□□□ -1.35
RPA3-201ENST00000223129 MT1BP07438 61 aa6.6□□□□□ -1.35
RPA3-201ENST00000223129 K7ERS5 55 aa6.55□□□□□ -1.36
RPA3-201ENST00000223129 KRTAP19-6Q3LI70 58 aa6.52□□□□□ -1.37
RPA3-201ENST00000223129 KRTAP25-1Q3LHN0 102 aa6.5□□□□□ -1.37
RPA3-201ENST00000223129 KRTAP13-4Q3LI77 160 aa6.48□□□□□ -1.37
RPA3-201ENST00000223129 FCGBPQ9Y6R7 5405 aaPredicted RBP6.47□□□□□ -1.37
RPA3-201ENST00000223129 LCE3BQ5TA77 95 aa6.43□□□□□ -1.38
RPA3-201ENST00000223129 PLAC4Q8WY50 150 aa6.42□□□□□ -1.38
RPA3-201ENST00000223129 ROMO1P60602 79 aa6.38□□□□□ -1.39
RPA3-201ENST00000223129 KRTAP10-5P60370 271 aa6.36□□□□□ -1.39
RPA3-201ENST00000223129 KRTAP4-8A0A0G2JLE6 195 aa6.33□□□□□ -1.4
RPA3-201ENST00000223129 KRTAP9-9Q9BYP9 154 aa6.33□□□□□ -1.4
RPA3-201ENST00000223129 KRTAP9-4Q9BYQ2 154 aa6.33□□□□□ -1.4
RPA3-201ENST00000223129 A0A0D9SG42 100 aa6.32□□□□□ -1.4
RPA3-201ENST00000223129 MT1XP80297 61 aa6.29□□□□□ -1.4
RPA3-201ENST00000223129 KRTAP4-12Q9BQ66 201 aa6.27□□□□□ -1.41
RPA3-201ENST00000223129 PRO2289Q9P1D8 64 aa6.23□□□□□ -1.41
RPA3-201ENST00000223129 MACF1Q9UPN3 7388 aaKnown RBP6.23□□□□□ -1.41
RPA3-201ENST00000223129 SPINT4Q6UDR6 99 aa6.2□□□□□ -1.42
RPA3-201ENST00000223129 KRTAP12-2P59991 146 aa6.18□□□□□ -1.42
RPA3-201ENST00000223129 KRTAP12-1P59990 96 aa6.18□□□□□ -1.42
RPA3-201ENST00000223129 CAMK2N1Q7Z7J9 78 aa6.15□□□□□ -1.42
RPA3-201ENST00000223129 KRTAP4-7Q9BYR0 210 aa6.15□□□□□ -1.42
RPA3-201ENST00000223129 SYNE2Q8WXH0 6885 aaKnown RBP6.11□□□□□ -1.43
RPA3-201ENST00000223129 H3BS24 57 aa6.11□□□□□ -1.43
RPA3-201ENST00000223129 C10orf95Q9H7T3 257 aa6.09□□□□□ -1.43
RPA3-201ENST00000223129 KRTAP9-7A8MTY7 169 aa6.06□□□□□ -1.44
RPA3-201ENST00000223129 KMT2DO14686 5537 aa6.04□□□□□ -1.44
RPA3-201ENST00000223129 KRTAP10-7P60409 375 aaPredicted RBP6.03□□□□□ -1.44
RPA3-201ENST00000223129 LCE1DQ5T752 114 aa6.01□□□□□ -1.45
RPA3-201ENST00000223129 KRTAP10-12P60413 245 aa5.96□□□□□ -1.46
RPA3-201ENST00000223129 KRTAP6-3Q3LI67 103 aa5.94□□□□□ -1.46
RPA3-201ENST00000223129 KRTAP15-1Q3LI76 137 aa5.93□□□□□ -1.46
RPA3-201ENST00000223129 KRTAP4-9Q9BYQ8 210 aa5.9□□□□□ -1.47
RPA3-201ENST00000223129 KRTAP4-2Q9BYR5 136 aa5.89□□□□□ -1.47
RPA3-201ENST00000223129 KRTAP8-1Q8IUC2 63 aa5.86□□□□□ -1.47
RPA3-201ENST00000223129 KRTAP5-9P26371 169 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms