RNA–Protein interactions for RNA: ENST00000216274.9

RIPK3-201, Transcript of receptor interacting serine/threonine kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPK3, Length 1,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK3-201ENST00000216274 XP32Q5T750 250 aa6.76□□□□□ -1.33
RIPK3-201ENST00000216274 LCA10Q71F78 164 aa6.76□□□□□ -1.33
RIPK3-201ENST00000216274 UBR4Q5T4S7 5183 aa6.75□□□□□ -1.33
RIPK3-201ENST00000216274 COX6B2Q6YFQ2 88 aa6.74□□□□□ -1.33
RIPK3-201ENST00000216274 TPRXLQ17RH7 258 aa6.72□□□□□ -1.33
RIPK3-201ENST00000216274 KRTAP3-1Q9BYR8 98 aa6.72□□□□□ -1.33
RIPK3-201ENST00000216274 A8MU10 97 aa6.71□□□□□ -1.34
RIPK3-201ENST00000216274 PMAIP1Q13794 54 aa6.7□□□□□ -1.34
RIPK3-201ENST00000216274 SEC61GP60059 68 aa6.7□□□□□ -1.34
RIPK3-201ENST00000216274 UQCR11O14957 56 aa6.65□□□□□ -1.34
RIPK3-201ENST00000216274 SPATA8Q6RVD6 105 aa6.62□□□□□ -1.35
RIPK3-201ENST00000216274 MIR22HGQ0VDD5 57 aa6.61□□□□□ -1.35
RIPK3-201ENST00000216274 KTN1-AS1Q86SY8 53 aa6.58□□□□□ -1.36
RIPK3-201ENST00000216274 MUC17Q685J3 4493 aa6.58□□□□□ -1.36
RIPK3-201ENST00000216274 RNF213Q63HN8 5207 aa6.58□□□□□ -1.36
RIPK3-201ENST00000216274 A6NN06 94 aa6.55□□□□□ -1.36
RIPK3-201ENST00000216274 S4R3F8 94 aa6.52□□□□□ -1.37
RIPK3-201ENST00000216274 SEC61BP60468 96 aaKnown RBP6.5□□□□□ -1.37
RIPK3-201ENST00000216274 A0A1B0GU33 70 aa6.49□□□□□ -1.37
RIPK3-201ENST00000216274 H1FX-AS1Q4G0G2 97 aa6.48□□□□□ -1.37
RIPK3-201ENST00000216274 KRTAP3-3Q9BYR6 98 aa6.46□□□□□ -1.37
RIPK3-201ENST00000216274 RBM12B-AS1Q9P1G2 102 aa6.46□□□□□ -1.37
RIPK3-201ENST00000216274 MUC2Q02817 5179 aa6.46□□□□□ -1.38
RIPK3-201ENST00000216274 H0YAA0 97 aa6.42□□□□□ -1.38
RIPK3-201ENST00000216274 KRTAP10-6P60371 365 aaPredicted RBP6.35□□□□□ -1.39
RIPK3-201ENST00000216274 KRTAP4-1Q9BYQ7 146 aa6.34□□□□□ -1.39
RIPK3-201ENST00000216274 FAT4Q6V0I7 4981 aa6.34□□□□□ -1.39
RIPK3-201ENST00000216274 KRTAP3-2Q9BYR7 98 aa6.33□□□□□ -1.4
RIPK3-201ENST00000216274 CSAG1Q6PB30 78 aa6.33□□□□□ -1.4
RIPK3-201ENST00000216274 K7ERS5 55 aa6.29□□□□□ -1.4
RIPK3-201ENST00000216274 ADM2Q7Z4H4 148 aa6.26□□□□□ -1.41
RIPK3-201ENST00000216274 LCE2AQ5TA79 106 aaPredicted RBP6.25□□□□□ -1.41
RIPK3-201ENST00000216274 P0C880 135 aa6.24□□□□□ -1.41
RIPK3-201ENST00000216274 KRTAP13-4Q3LI77 160 aa6.21□□□□□ -1.42
RIPK3-201ENST00000216274 KRTAP19-2Q3LHN2 52 aa6.19□□□□□ -1.42
RIPK3-201ENST00000216274 PRAC1Q96KF2 57 aa6.17□□□□□ -1.42
RIPK3-201ENST00000216274 LCE2CQ5TA81 110 aa6.17□□□□□ -1.42
RIPK3-201ENST00000216274 A0A0D9SG42 100 aa6.16□□□□□ -1.42
RIPK3-201ENST00000216274 M0QZ58 72 aa6.15□□□□□ -1.43
RIPK3-201ENST00000216274 MT1HP80294 61 aa6.09□□□□□ -1.43
RIPK3-201ENST00000216274 LINC01554Q52M75 96 aa6.07□□□□□ -1.44
RIPK3-201ENST00000216274 ROMO1P60602 79 aa6.05□□□□□ -1.44
RIPK3-201ENST00000216274 FLGP20930 4061 aaPredicted RBP6.04□□□□□ -1.44
RIPK3-201ENST00000216274 KRTAP12-1P59990 96 aa6.01□□□□□ -1.45
RIPK3-201ENST00000216274 R4GN34 69 aa6.01□□□□□ -1.45
RIPK3-201ENST00000216274 KRTAP12-2P59991 146 aa6.01□□□□□ -1.45
RIPK3-201ENST00000216274 SPINT4Q6UDR6 99 aa6□□□□□ -1.45
RIPK3-201ENST00000216274 KRTAP25-1Q3LHN0 102 aa5.97□□□□□ -1.45
RIPK3-201ENST00000216274 M0R2T5 61 aa5.97□□□□□ -1.45
RIPK3-201ENST00000216274 LORP23490 312 aaPredicted RBP5.95□□□□□ -1.46
RIPK3-201ENST00000216274 KRTAP9-2Q9BYQ4 174 aa5.91□□□□□ -1.46
RIPK3-201ENST00000216274 LCE2DQ5TA82 110 aaPredicted RBP5.89□□□□□ -1.47
RIPK3-201ENST00000216274 CRIPTQ9P021 101 aa5.86□□□□□ -1.47
RIPK3-201ENST00000216274 KRTAP9-8Q9BYQ0 159 aa5.79□□□□□ -1.48
RIPK3-201ENST00000216274 MT2AP02795 61 aa5.72□□□□□ -1.49
RIPK3-201ENST00000216274 C10orf95Q9H7T3 257 aa5.71□□□□□ -1.5
RIPK3-201ENST00000216274 CAMK2N1Q7Z7J9 78 aa5.68□□□□□ -1.5
RIPK3-201ENST00000216274 KRTAP9-6A0A140TA67 174 aa5.67□□□□□ -1.5
RIPK3-201ENST00000216274 MT1FP04733 61 aa5.66□□□□□ -1.5
RIPK3-201ENST00000216274 KRTAP10-10P60014 251 aa5.64□□□□□ -1.51
RIPK3-201ENST00000216274 CRCT1Q9UGL9 99 aa5.63□□□□□ -1.51
RIPK3-201ENST00000216274 FSIP2Q5CZC0 6907 aa5.62□□□□□ -1.51
RIPK3-201ENST00000216274 SPRR2GQ9BYE4 73 aa5.61□□□□□ -1.51
RIPK3-201ENST00000216274 KRTAP9-3Q9BYQ3 159 aa5.6□□□□□ -1.51
RIPK3-201ENST00000216274 KRTAP19-1Q8IUB9 90 aa5.54□□□□□ -1.52
RIPK3-201ENST00000216274 PLAC4Q8WY50 150 aa5.54□□□□□ -1.52
RIPK3-201ENST00000216274 LCE2BO14633 110 aa5.52□□□□□ -1.53
RIPK3-201ENST00000216274 USH2AO75445 5202 aa5.51□□□□□ -1.53
RIPK3-201ENST00000216274 PP632Q6XCG6 107 aa5.5□□□□□ -1.53
RIPK3-201ENST00000216274 TNP1P09430 55 aa5.46□□□□□ -1.53
RIPK3-201ENST00000216274 SSPOA2VEC9 5147 aa5.43□□□□□ -1.54
RIPK3-201ENST00000216274 KRTAP19-8Q3LI54 63 aa5.42□□□□□ -1.54
RIPK3-201ENST00000216274 KRTAP23-1A1A580 65 aa5.4□□□□□ -1.54
RIPK3-201ENST00000216274 H3BS24 57 aa5.39□□□□□ -1.55
RIPK3-201ENST00000216274 KRTAP15-1Q3LI76 137 aa5.36□□□□□ -1.55
RIPK3-201ENST00000216274 KRTAP19-6Q3LI70 58 aa5.35□□□□□ -1.55
RIPK3-201ENST00000216274 MT1BP07438 61 aa5.31□□□□□ -1.56
RIPK3-201ENST00000216274 FCGBPQ9Y6R7 5405 aaPredicted RBP5.29□□□□□ -1.56
RIPK3-201ENST00000216274 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.23□□□□□ -1.57
RIPK3-201ENST00000216274 KRTAP10-5P60370 271 aa5.21□□□□□ -1.58
RIPK3-201ENST00000216274 MT1XP80297 61 aa5.21□□□□□ -1.58
RIPK3-201ENST00000216274 NDUFAF8A1L188 74 aa5.18□□□□□ -1.58
RIPK3-201ENST00000216274 PRO2289Q9P1D8 64 aa5.16□□□□□ -1.58
RIPK3-201ENST00000216274 LCE3AQ5TA76 89 aa5.15□□□□□ -1.59
RIPK3-201ENST00000216274 MACF1Q9UPN3 7388 aaKnown RBP5.12□□□□□ -1.59
RIPK3-201ENST00000216274 KRTAP9-7A8MTY7 169 aa5.12□□□□□ -1.59
RIPK3-201ENST00000216274 KRTAP10-12P60413 245 aa5.07□□□□□ -1.6
RIPK3-201ENST00000216274 LUZP6Q538Z0 58 aa5.07□□□□□ -1.6
RIPK3-201ENST00000216274 KRTAP8-1Q8IUC2 63 aa5.06□□□□□ -1.6
RIPK3-201ENST00000216274 SYNE2Q8WXH0 6885 aaKnown RBP5.01□□□□□ -1.61
RIPK3-201ENST00000216274 KRTAP10-7P60409 375 aaPredicted RBP5.01□□□□□ -1.61
RIPK3-201ENST00000216274 KRTAP6-3Q3LI67 103 aa4.97□□□□□ -1.61
RIPK3-201ENST00000216274 SPRR5A0A1B0GTR4 108 aa4.97□□□□□ -1.61
RIPK3-201ENST00000216274 KRTAP12-3P60328 96 aa4.94□□□□□ -1.62
RIPK3-201ENST00000216274 KRTAP5-9P26371 169 aa4.83□□□□□ -1.64
RIPK3-201ENST00000216274 A0A0A0MQY5 61 aa4.81□□□□□ -1.64
RIPK3-201ENST00000216274 KRTAP19-5Q3LI72 72 aa4.79□□□□□ -1.64
RIPK3-201ENST00000216274 MUC12Q9UKN1 5478 aa4.77□□□□□ -1.65
RIPK3-201ENST00000216274 KMT2DO14686 5537 aa4.76□□□□□ -1.65
RIPK3-201ENST00000216274 NEBP20929 6669 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms