RNA–Protein interactions for RNA: ENSMUST00000201711.3

Pdgfra-205, Transcript of Platelet-derived growth factor receptor alpha, mousemouse

TSL 1 (best) BASIC

Gene Pdgfra, Length 4,088 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdgfra-205ENSMUST00000201711 Plp1P60202 277 aa10.44□□□□□ -0.74
Pdgfra-205ENSMUST00000201711 Rps20P60867 119 aaKnown RBP10.44□□□□□ -0.74
Pdgfra-205ENSMUST00000201711 Spsb3Q571F5 354 aa10.44□□□□□ -0.74
Pdgfra-205ENSMUST00000201711 Htr1dQ61224 374 aa10.44□□□□□ -0.74
Pdgfra-205ENSMUST00000201711 Znhit3Q9CQK1 151 aa10.44□□□□□ -0.74
Pdgfra-205ENSMUST00000201711 GlrxQ9QUH0 107 aa10.44□□□□□ -0.74
Pdgfra-205ENSMUST00000201711 Ankrd11E9Q4F7 2643 aa10.44□□□□□ -0.74
Pdgfra-205ENSMUST00000201711 Gm20481G3UXK4 153 aa10.44□□□□□ -0.74
Pdgfra-205ENSMUST00000201711 Cacng7P62956 275 aa10.44□□□□□ -0.74
Pdgfra-205ENSMUST00000201711 Cdx4Q07424 282 aa10.44□□□□□ -0.74
Pdgfra-205ENSMUST00000201711 Q5BN45 167 aa10.44□□□□□ -0.74
Pdgfra-205ENSMUST00000201711 Lyzl1Q9CPX3 148 aa10.44□□□□□ -0.74
Pdgfra-205ENSMUST00000201711 Pla2g2aP31482 146 aa10.44□□□□□ -0.74
Pdgfra-205ENSMUST00000201711 Ighv3-8A0A075B5T0 131 aa10.43□□□□□ -0.74
Pdgfra-205ENSMUST00000201711 Ube2e1P52482 193 aa10.43□□□□□ -0.74
Pdgfra-205ENSMUST00000201711 Psg25Q497W1 475 aa10.43□□□□□ -0.74
Pdgfra-205ENSMUST00000201711 Pxt1Q8K459 51 aa10.43□□□□□ -0.74
Pdgfra-205ENSMUST00000201711 Fam240aJ3QNP9 97 aa10.43□□□□□ -0.74
Pdgfra-205ENSMUST00000201711 PdpnQ62011 172 aa10.43□□□□□ -0.74
Pdgfra-205ENSMUST00000201711 Cend1Q9JKC6 149 aa10.43□□□□□ -0.74
Pdgfra-205ENSMUST00000201711 CompQ9R0G6 755 aa10.43□□□□□ -0.74
Pdgfra-205ENSMUST00000201711 Ighv1-39A0A075B5V5 117 aa10.43□□□□□ -0.74
Pdgfra-205ENSMUST00000201711 Gm15217A2CG07 155 aa10.43□□□□□ -0.74
Pdgfra-205ENSMUST00000201711 Nsun4C4P6S0 806 aaKnown RBP10.43□□□□□ -0.74
Pdgfra-205ENSMUST00000201711 P04943 107 aa10.43□□□□□ -0.74
Pdgfra-205ENSMUST00000201711 TdhQ8K3F7 373 aa10.43□□□□□ -0.74
Pdgfra-205ENSMUST00000201711 Gm20379A0A087WR34 119 aa10.43□□□□□ -0.74
Pdgfra-205ENSMUST00000201711 Ighv1-62-3P01754 117 aa10.43□□□□□ -0.74
Pdgfra-205ENSMUST00000201711 P0C1Z5 52 aa10.43□□□□□ -0.74
Pdgfra-205ENSMUST00000201711 NdpP48744 131 aa10.43□□□□□ -0.74
Pdgfra-205ENSMUST00000201711 Hist1h1tQ07133 208 aa10.43□□□□□ -0.74
Pdgfra-205ENSMUST00000201711 NpbQ8K4P1 119 aa10.43□□□□□ -0.74
Pdgfra-205ENSMUST00000201711 Sec11aQ9R0P6 179 aa10.43□□□□□ -0.74
Pdgfra-205ENSMUST00000201711 Thy1P01831 162 aa10.42□□□□□ -0.74
Pdgfra-205ENSMUST00000201711 Muc15Q8C6Z1 331 aa10.42□□□□□ -0.74
Pdgfra-205ENSMUST00000201711 Fmc1Q9CR13 113 aa10.42□□□□□ -0.74
Pdgfra-205ENSMUST00000201711 Gm26920S4R2A5 56 aa10.42□□□□□ -0.74
Pdgfra-205ENSMUST00000201711 Olfr317Q5NCD6 327 aa10.42□□□□□ -0.74
Pdgfra-205ENSMUST00000201711 Trav6-4A0A075B6B4 115 aa10.42□□□□□ -0.74
Pdgfra-205ENSMUST00000201711 TctaQ8VEA7 122 aa10.42□□□□□ -0.74
Pdgfra-205ENSMUST00000201711 Fbxl15Q91W61 300 aa10.42□□□□□ -0.74
Pdgfra-205ENSMUST00000201711 Tcrg-V6A0A075B5Y8 134 aa10.41□□□□□ -0.74
Pdgfra-205ENSMUST00000201711 Gng4P50153 75 aa10.41□□□□□ -0.74
Pdgfra-205ENSMUST00000201711 Cnn3Q9DAW9 330 aaKnown RBP10.41□□□□□ -0.74
Pdgfra-205ENSMUST00000201711 Epg5Q80TA9 2572 aa10.41□□□□□ -0.74
Pdgfra-205ENSMUST00000201711 Trav19A0A0B4J1K4 119 aa10.41□□□□□ -0.74
Pdgfra-205ENSMUST00000201711 P01791 123 aa10.41□□□□□ -0.74
Pdgfra-205ENSMUST00000201711 Edn1P22387 202 aa10.41□□□□□ -0.74
Pdgfra-205ENSMUST00000201711 Tax1bp3Q9DBG9 124 aa10.41□□□□□ -0.74
Pdgfra-205ENSMUST00000201711 Mlst8Q9DCJ1 326 aa10.41□□□□□ -0.74
Pdgfra-205ENSMUST00000201711 Ighv1-62-2A0A0A6YXZ4 119 aa10.41□□□□□ -0.74
Pdgfra-205ENSMUST00000201711 TcraP01849 138 aa10.41□□□□□ -0.74
Pdgfra-205ENSMUST00000201711 Rpl13aP19253 203 aaKnown RBP10.41□□□□□ -0.74
Pdgfra-205ENSMUST00000201711 Edn3P48299 214 aa10.41□□□□□ -0.74
Pdgfra-205ENSMUST00000201711 Ighv1-80A0A075B5Y3 117 aa10.4□□□□□ -0.74
Pdgfra-205ENSMUST00000201711 Gm5819E9PZ96 154 aa10.4□□□□□ -0.74
Pdgfra-205ENSMUST00000201711 Q3UNZ8 350 aa10.4□□□□□ -0.74
Pdgfra-205ENSMUST00000201711 Slc35d2Q762D5 326 aa10.4□□□□□ -0.74
Pdgfra-205ENSMUST00000201711 Rbfox3Q8BIF2 374 aa10.4□□□□□ -0.74
Pdgfra-205ENSMUST00000201711 Mrpl36Q99N90 102 aa10.4□□□□□ -0.74
Pdgfra-205ENSMUST00000201711 Gkn1Q9CR36 201 aa10.4□□□□□ -0.74
Pdgfra-205ENSMUST00000201711 Col27a1Q5QNQ9 1845 aa10.4□□□□□ -0.74
Pdgfra-205ENSMUST00000201711 Igkv4-81A0A0G2JEY5 119 aa10.4□□□□□ -0.74
Pdgfra-205ENSMUST00000201711 Cd24P24807 76 aa10.4□□□□□ -0.74
Pdgfra-205ENSMUST00000201711 Ang6Q5GAN0 147 aa10.4□□□□□ -0.74
Pdgfra-205ENSMUST00000201711 Clec4b2Q67DU8 208 aa10.4□□□□□ -0.74
Pdgfra-205ENSMUST00000201711 Dkk2Q9QYZ8 259 aa10.4□□□□□ -0.74
Pdgfra-205ENSMUST00000201711 ColqO35348 457 aa10.4□□□□□ -0.75
Pdgfra-205ENSMUST00000201711 Zfp119aQ9JIC0 545 aa10.4□□□□□ -0.75
Pdgfra-205ENSMUST00000201711 Bhlha15Q9QYC3 197 aa10.4□□□□□ -0.75
Pdgfra-205ENSMUST00000201711 Slc16a4Q8R0M8 500 aa10.39□□□□□ -0.75
Pdgfra-205ENSMUST00000201711 Hcfc2Q9D968 241 aa10.39□□□□□ -0.75
Pdgfra-205ENSMUST00000201711 Josd1Q9DBJ6 202 aa10.39□□□□□ -0.75
Pdgfra-205ENSMUST00000201711 Snrpd3P62320 126 aaKnown RBP10.39□□□□□ -0.75
Pdgfra-205ENSMUST00000201711 Minos1Q7TNS2 76 aa10.39□□□□□ -0.75
Pdgfra-205ENSMUST00000201711 Ighv8-4A0A0A6YW26 117 aa10.39□□□□□ -0.75
Pdgfra-205ENSMUST00000201711 Tmem238lA0A1B0GS74 79 aa10.39□□□□□ -0.75
Pdgfra-205ENSMUST00000201711 BlcapP62951 87 aa10.39□□□□□ -0.75
Pdgfra-205ENSMUST00000201711 Uqcrfs1Q9CR68 274 aa10.39□□□□□ -0.75
Pdgfra-205ENSMUST00000201711 Avpi1Q9D7H4 142 aa10.39□□□□□ -0.75
Pdgfra-205ENSMUST00000201711 Gm9958Q8C9U4 106 aa10.38□□□□□ -0.75
Pdgfra-205ENSMUST00000201711 Vmn1r216Q8R257 298 aa10.38□□□□□ -0.75
Pdgfra-205ENSMUST00000201711 Ighv1-16A0A075B5U1 98 aa10.38□□□□□ -0.75
Pdgfra-205ENSMUST00000201711 Itgb1bp1O35671 200 aa10.38□□□□□ -0.75
Pdgfra-205ENSMUST00000201711 Spcs1Q9D958 161 aa10.38□□□□□ -0.75
Pdgfra-205ENSMUST00000201711 Ighv5-6A0A075B5Q0 117 aa10.38□□□□□ -0.75
Pdgfra-205ENSMUST00000201711 Nbl1Q61477 178 aa10.38□□□□□ -0.75
Pdgfra-205ENSMUST00000201711 Snx22Q8C084 192 aa10.38□□□□□ -0.75
Pdgfra-205ENSMUST00000201711 CklfQ9DAS1 152 aa10.38□□□□□ -0.75
Pdgfra-205ENSMUST00000201711 Erg28Q9ERY9 140 aa10.38□□□□□ -0.75
Pdgfra-205ENSMUST00000201711 Col4a2P08122 1707 aa10.38□□□□□ -0.75
Pdgfra-205ENSMUST00000201711 Gm5468Q8C3D3 155 aa10.38□□□□□ -0.75
Pdgfra-205ENSMUST00000201711 Tomm40Q9QYA2 361 aa10.38□□□□□ -0.75
Pdgfra-205ENSMUST00000201711 IgipA0A1B0GR74 53 aa10.37□□□□□ -0.75
Pdgfra-205ENSMUST00000201711 Tmem136Q3TYE7 245 aa10.37□□□□□ -0.75
Pdgfra-205ENSMUST00000201711 AamdcQ8R0P4 122 aa10.37□□□□□ -0.75
Pdgfra-205ENSMUST00000201711 Tmem97Q8VD00 176 aa10.37□□□□□ -0.75
Pdgfra-205ENSMUST00000201711 Olfr1367Q8VFG2 316 aa10.37□□□□□ -0.75
Pdgfra-205ENSMUST00000201711 Q9D727 114 aa10.37□□□□□ -0.75
Pdgfra-205ENSMUST00000201711 Igkv20-101-2A0A0G2JDU3 113 aa10.37□□□□□ -0.75
Retrieved 100 of 22,080 RNA–protein pairs in 122.7 ms