RNA–Protein interactions for RNA: ENSMUST00000085546.12

Hmgb1-201, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 2,838 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-201ENSMUST00000085546 6330409D20RikA2AK85 162 aa7.58□□□□□ -1.2
Hmgb1-201ENSMUST00000085546 Gm21983D6RFS9 131 aa7.58□□□□□ -1.2
Hmgb1-201ENSMUST00000085546 Fam240aJ3QNP9 97 aa7.58□□□□□ -1.2
Hmgb1-201ENSMUST00000085546 Ppp1r14aQ91VC7 147 aa7.58□□□□□ -1.2
Hmgb1-201ENSMUST00000085546 D730048I06RikQ9CQB8 106 aa7.58□□□□□ -1.2
Hmgb1-201ENSMUST00000085546 Crip2Q9DCT8 208 aaKnown RBP7.58□□□□□ -1.2
Hmgb1-201ENSMUST00000085546 P06334 169 aa7.58□□□□□ -1.2
Hmgb1-201ENSMUST00000085546 G430049J08RikQ3TL09 166 aa7.58□□□□□ -1.2
Hmgb1-201ENSMUST00000085546 PmvkQ9D1G2 192 aa7.58□□□□□ -1.2
Hmgb1-201ENSMUST00000085546 Ighv5-12-4A0A0A6YWG4 117 aa7.57□□□□□ -1.2
Hmgb1-201ENSMUST00000085546 Gm21974F6W3F3 119 aa7.57□□□□□ -1.2
Hmgb1-201ENSMUST00000085546 Gm10337F7DEP7 55 aa7.57□□□□□ -1.2
Hmgb1-201ENSMUST00000085546 P01812 117 aa7.57□□□□□ -1.2
Hmgb1-201ENSMUST00000085546 Rpl32-psP17932 135 aa7.57□□□□□ -1.2
Hmgb1-201ENSMUST00000085546 Ccl2P10148 148 aa7.57□□□□□ -1.2
Hmgb1-201ENSMUST00000085546 VegfbP49766 207 aa7.57□□□□□ -1.2
Hmgb1-201ENSMUST00000085546 4930432M17RikQ3V0W9 174 aa7.57□□□□□ -1.2
Hmgb1-201ENSMUST00000085546 Trav7d-3Q5R1I1 112 aa7.57□□□□□ -1.2
Hmgb1-201ENSMUST00000085546 Gatd1Q8BFQ8 220 aa7.57□□□□□ -1.2
Hmgb1-201ENSMUST00000085546 Ovol1Q9WTJ2 267 aa7.57□□□□□ -1.2
Hmgb1-201ENSMUST00000085546 Trdv1A0A075B657 112 aa7.56□□□□□ -1.2
Hmgb1-201ENSMUST00000085546 Trav7-1A0A0G2JEV5 112 aa7.56□□□□□ -1.2
Hmgb1-201ENSMUST00000085546 4930447F04RikA2AFR2 126 aa7.56□□□□□ -1.2
Hmgb1-201ENSMUST00000085546 Gm11444F6QMA6 170 aa7.56□□□□□ -1.2
Hmgb1-201ENSMUST00000085546 CrygbP04344 175 aa7.56□□□□□ -1.2
Hmgb1-201ENSMUST00000085546 CenpwQ3URR0 86 aa7.56□□□□□ -1.2
Hmgb1-201ENSMUST00000085546 Wfdc8Q4KUS1 273 aa7.56□□□□□ -1.2
Hmgb1-201ENSMUST00000085546 Ubald1Q6P3B2 176 aa7.56□□□□□ -1.2
Hmgb1-201ENSMUST00000085546 4933414I15RikQ9D4D5 133 aa7.56□□□□□ -1.2
Hmgb1-201ENSMUST00000085546 Snai3Q9QY31 287 aa7.56□□□□□ -1.2
Hmgb1-201ENSMUST00000085546 Col8a2P25318 699 aa7.56□□□□□ -1.2
Hmgb1-201ENSMUST00000085546 Dynlrb1P62627 96 aa7.56□□□□□ -1.2
Hmgb1-201ENSMUST00000085546 Crip1P63254 77 aa7.56□□□□□ -1.2
Hmgb1-201ENSMUST00000085546 Pate2Q3UW31 111 aa7.56□□□□□ -1.2
Hmgb1-201ENSMUST00000085546 Ighv9-2A0A0B4J1J4 117 aa7.56□□□□□ -1.2
Hmgb1-201ENSMUST00000085546 Sh2d1bO35324 132 aa7.56□□□□□ -1.2
Hmgb1-201ENSMUST00000085546 P01680 129 aa7.56□□□□□ -1.2
Hmgb1-201ENSMUST00000085546 Egr2P08152 470 aa7.56□□□□□ -1.2
Hmgb1-201ENSMUST00000085546 Tmem258P61166 79 aa7.56□□□□□ -1.2
Hmgb1-201ENSMUST00000085546 AmelxP63277 210 aa7.56□□□□□ -1.2
Hmgb1-201ENSMUST00000085546 Foxg1Q60987 481 aa7.56□□□□□ -1.2
Hmgb1-201ENSMUST00000085546 Ints1Q6P4S8 2195 aa7.55□□□□□ -1.2
Hmgb1-201ENSMUST00000085546 Gm26965M0QWH4 86 aa7.55□□□□□ -1.2
Hmgb1-201ENSMUST00000085546 VwceQ3U515 929 aa7.55□□□□□ -1.2
Hmgb1-201ENSMUST00000085546 Bricd5Q8BV89 174 aa7.55□□□□□ -1.2
Hmgb1-201ENSMUST00000085546 Q8VC23 124 aa7.55□□□□□ -1.2
Hmgb1-201ENSMUST00000085546 Fam19a5Q91WE9 132 aa7.55□□□□□ -1.2
Hmgb1-201ENSMUST00000085546 Myo7bQ99MZ6 2113 aa7.55□□□□□ -1.2
Hmgb1-201ENSMUST00000085546 Cdh23Q99PF4 3354 aa7.55□□□□□ -1.2
Hmgb1-201ENSMUST00000085546 Ighv5-9A0A075B5Q2 117 aa7.55□□□□□ -1.2
Hmgb1-201ENSMUST00000085546 Igkv6-32A0A140T8N9 115 aa7.55□□□□□ -1.2
Hmgb1-201ENSMUST00000085546 Casp6O08738 276 aa7.55□□□□□ -1.2
Hmgb1-201ENSMUST00000085546 SrarpQ3ULG3 163 aa7.55□□□□□ -1.2
Hmgb1-201ENSMUST00000085546 BaalcQ8VHV1 145 aa7.55□□□□□ -1.2
Hmgb1-201ENSMUST00000085546 Triap1Q9D8Z2 76 aa7.55□□□□□ -1.2
Hmgb1-201ENSMUST00000085546 Morn5Q9DAI9 170 aa7.55□□□□□ -1.2
Hmgb1-201ENSMUST00000085546 Rab37Q9JKM7 223 aa7.55□□□□□ -1.2
Hmgb1-201ENSMUST00000085546 Klk11Q9QYN3 276 aa7.55□□□□□ -1.2
Hmgb1-201ENSMUST00000085546 BC025446A0A087WQT1 134 aa7.54□□□□□ -1.2
Hmgb1-201ENSMUST00000085546 P04944 107 aa7.54□□□□□ -1.2
Hmgb1-201ENSMUST00000085546 TtrP07309 147 aa7.54□□□□□ -1.2
Hmgb1-201ENSMUST00000085546 P0C1Z5 52 aa7.54□□□□□ -1.2
Hmgb1-201ENSMUST00000085546 C2cd4dP0CG09 341 aa7.54□□□□□ -1.2
Hmgb1-201ENSMUST00000085546 Dlx6P70397 175 aa7.54□□□□□ -1.2
Hmgb1-201ENSMUST00000085546 Gm19935A0A1B0GSF9 52 aa7.54□□□□□ -1.2
Hmgb1-201ENSMUST00000085546 Gm4791J3QQ14 102 aa7.54□□□□□ -1.2
Hmgb1-201ENSMUST00000085546 Cxcl13O55038 109 aa7.54□□□□□ -1.2
Hmgb1-201ENSMUST00000085546 Rbfox3Q8BIF2 374 aa7.54□□□□□ -1.2
Hmgb1-201ENSMUST00000085546 Ighv1-52A0A0A6YXC3 117 aa7.53□□□□□ -1.2
Hmgb1-201ENSMUST00000085546 Igkv6-25A0A140T8N7 115 aa7.53□□□□□ -1.2
Hmgb1-201ENSMUST00000085546 P04941 107 aa7.53□□□□□ -1.2
Hmgb1-201ENSMUST00000085546 Ly6aP05533 134 aa7.53□□□□□ -1.2
Hmgb1-201ENSMUST00000085546 P18526 117 aa7.53□□□□□ -1.2
Hmgb1-201ENSMUST00000085546 Tex26Q0VB26 296 aa7.53□□□□□ -1.2
Hmgb1-201ENSMUST00000085546 Dmrt3Q80WT2 476 aa7.53□□□□□ -1.2
Hmgb1-201ENSMUST00000085546 Trbv30A0A0B4J1P1 111 aa7.53□□□□□ -1.2
Hmgb1-201ENSMUST00000085546 1520401A03RikA0A0J9YVH6 598 aa7.53□□□□□ -1.2
Hmgb1-201ENSMUST00000085546 Srsf2Q62093 221 aaKnown RBP7.53□□□□□ -1.2
Hmgb1-201ENSMUST00000085546 Tmem30bQ8BHG3 353 aa7.53□□□□□ -1.2
Hmgb1-201ENSMUST00000085546 Gm9922Q8C3P1 144 aa7.53□□□□□ -1.2
Hmgb1-201ENSMUST00000085546 Wdr5bQ9D7H2 328 aa7.53□□□□□ -1.2
Hmgb1-201ENSMUST00000085546 Spata25Q9DA57 226 aa7.53□□□□□ -1.2
Hmgb1-201ENSMUST00000085546 Lbhd2G3UW55 114 aa7.52□□□□□ -1.21
Hmgb1-201ENSMUST00000085546 Gm933J3QPC1 141 aa7.52□□□□□ -1.21
Hmgb1-201ENSMUST00000085546 Olfr898L7N1Z5 316 aa7.52□□□□□ -1.21
Hmgb1-201ENSMUST00000085546 Gata1P17679 413 aa7.52□□□□□ -1.21
Hmgb1-201ENSMUST00000085546 RtbdnQ8QZY4 247 aa7.52□□□□□ -1.21
Hmgb1-201ENSMUST00000085546 4930564D02RikQ9D4S4 103 aa7.52□□□□□ -1.21
Hmgb1-201ENSMUST00000085546 Ighv5-4A0A075B5P9 117 aa7.52□□□□□ -1.21
Hmgb1-201ENSMUST00000085546 Gm6793B2RXM2 351 aa7.52□□□□□ -1.21
Hmgb1-201ENSMUST00000085546 Gm42674D3YUT9 64 aa7.52□□□□□ -1.21
Hmgb1-201ENSMUST00000085546 RflnaQ7TS73 204 aa7.52□□□□□ -1.21
Hmgb1-201ENSMUST00000085546 Eda2rQ8BX35 297 aa7.52□□□□□ -1.21
Hmgb1-201ENSMUST00000085546 Jbts17Q8CE72 3214 aa7.52□□□□□ -1.21
Hmgb1-201ENSMUST00000085546 Gm33815A0A087WNV3 176 aa7.51□□□□□ -1.21
Hmgb1-201ENSMUST00000085546 Cd24P24807 76 aa7.51□□□□□ -1.21
Hmgb1-201ENSMUST00000085546 Gm10767Q3TQP0 103 aa7.51□□□□□ -1.21
Hmgb1-201ENSMUST00000085546 Prdx2Q61171 198 aaKnown RBP7.51□□□□□ -1.21
Hmgb1-201ENSMUST00000085546 Ss18Q62280 418 aa7.51□□□□□ -1.21
Hmgb1-201ENSMUST00000085546 Wdfy3Q6VNB8 3508 aa7.51□□□□□ -1.21
Retrieved 100 of 22,080 RNA–protein pairs in 49.1 ms