RNA–Protein interactions for RNA: ENSMUST00000076265.12

Upf3b-201, Transcript of UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3b, Length 2,344 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3b-201ENSMUST00000076265 Apoc2Q05020 97 aa6.71□□□□□ -1.33
Upf3b-201ENSMUST00000076265 Defa26Q3L180 93 aa6.71□□□□□ -1.33
Upf3b-201ENSMUST00000076265 Znhit1Q8R331 154 aa6.71□□□□□ -1.33
Upf3b-201ENSMUST00000076265 Olfr490Q8VFD2 314 aa6.71□□□□□ -1.33
Upf3b-201ENSMUST00000076265 Nop16Q9CPT5 178 aaKnown RBP6.71□□□□□ -1.33
Upf3b-201ENSMUST00000076265 RelnQ60841 3461 aa6.71□□□□□ -1.34
Upf3b-201ENSMUST00000076265 Gm28305F6U473 122 aa6.71□□□□□ -1.34
Upf3b-201ENSMUST00000076265 Vpreb2P13373 142 aa6.71□□□□□ -1.34
Upf3b-201ENSMUST00000076265 Phxr1P15973 60 aa6.71□□□□□ -1.34
Upf3b-201ENSMUST00000076265 Elk1P41969 429 aa6.71□□□□□ -1.34
Upf3b-201ENSMUST00000076265 Tdgf1P51865 171 aa6.71□□□□□ -1.34
Upf3b-201ENSMUST00000076265 Lrcol1Q3URS3 161 aa6.71□□□□□ -1.34
Upf3b-201ENSMUST00000076265 CybaQ61462 192 aa6.71□□□□□ -1.34
Upf3b-201ENSMUST00000076265 Defb35Q8R2I3 63 aa6.71□□□□□ -1.34
Upf3b-201ENSMUST00000076265 Bles03Q8VD62 251 aa6.71□□□□□ -1.34
Upf3b-201ENSMUST00000076265 Olfr368Q8VF22 327 aa6.71□□□□□ -1.34
Upf3b-201ENSMUST00000076265 Plekhf2Q91WB4 249 aa6.71□□□□□ -1.34
Upf3b-201ENSMUST00000076265 Q9CX25 107 aa6.71□□□□□ -1.34
Upf3b-201ENSMUST00000076265 Ptprz1B9EKR1 2312 aa6.71□□□□□ -1.34
Upf3b-201ENSMUST00000076265 Trip12G5E870 2025 aaKnown RBP6.71□□□□□ -1.34
Upf3b-201ENSMUST00000076265 Col6a6Q8C6K9 2265 aa6.7□□□□□ -1.34
Upf3b-201ENSMUST00000076265 Celsr3Q91ZI0 3301 aa6.7□□□□□ -1.34
Upf3b-201ENSMUST00000076265 Trav14n-3A0A075B645 120 aa6.7□□□□□ -1.34
Upf3b-201ENSMUST00000076265 2210017I01RikA0A0A6YVV1 95 aa6.7□□□□□ -1.34
Upf3b-201ENSMUST00000076265 Ighv1-43A0A0A6YXN5 117 aa6.7□□□□□ -1.34
Upf3b-201ENSMUST00000076265 Gm17669F6QL70 154 aa6.7□□□□□ -1.34
Upf3b-201ENSMUST00000076265 C2cd4dP0CG09 341 aa6.7□□□□□ -1.34
Upf3b-201ENSMUST00000076265 Rpl29P47915 160 aaKnown RBP6.7□□□□□ -1.34
Upf3b-201ENSMUST00000076265 Gm10645Q3UPY1 145 aa6.7□□□□□ -1.34
Upf3b-201ENSMUST00000076265 Q497N7 227 aa6.7□□□□□ -1.34
Upf3b-201ENSMUST00000076265 Gm9881Q8BR56 211 aa6.7□□□□□ -1.34
Upf3b-201ENSMUST00000076265 4930447A16RikQ9D5F6 132 aa6.7□□□□□ -1.34
Upf3b-201ENSMUST00000076265 Arfgef3Q3UGY8 2170 aa6.7□□□□□ -1.34
Upf3b-201ENSMUST00000076265 Gm33815A0A087WNV3 176 aa6.7□□□□□ -1.34
Upf3b-201ENSMUST00000076265 Ighv1-11A0A0A6YWI9 117 aa6.7□□□□□ -1.34
Upf3b-201ENSMUST00000076265 Lst1O08843 95 aa6.7□□□□□ -1.34
Upf3b-201ENSMUST00000076265 FcorP0DJI6 106 aa6.7□□□□□ -1.34
Upf3b-201ENSMUST00000076265 Mpv17P19258 176 aa6.7□□□□□ -1.34
Upf3b-201ENSMUST00000076265 Odf3Q920N1 254 aa6.7□□□□□ -1.34
Upf3b-201ENSMUST00000076265 Dkk2Q9QYZ8 259 aa6.7□□□□□ -1.34
Upf3b-201ENSMUST00000076265 Sptbn2Q68FG2 2388 aa6.69□□□□□ -1.34
Upf3b-201ENSMUST00000076265 AgrnA2ASQ1 1950 aa6.69□□□□□ -1.34
Upf3b-201ENSMUST00000076265 Igkv15-103A0A140T8P3 115 aa6.69□□□□□ -1.34
Upf3b-201ENSMUST00000076265 Gm20715E9Q3L7 95 aa6.69□□□□□ -1.34
Upf3b-201ENSMUST00000076265 TshbP12656 138 aa6.69□□□□□ -1.34
Upf3b-201ENSMUST00000076265 Olfr491Q8VG06 310 aa6.69□□□□□ -1.34
Upf3b-201ENSMUST00000076265 Sfxn3Q91V61 321 aa6.69□□□□□ -1.34
Upf3b-201ENSMUST00000076265 Mustn1Q99JI1 82 aa6.69□□□□□ -1.34
Upf3b-201ENSMUST00000076265 Nkg7Q99PA5 165 aa6.69□□□□□ -1.34
Upf3b-201ENSMUST00000076265 Q9D4G1 230 aa6.69□□□□□ -1.34
Upf3b-201ENSMUST00000076265 SelenokQ9JLJ1 94 aa6.69□□□□□ -1.34
Upf3b-201ENSMUST00000076265 TprF6ZDS4 2431 aaKnown RBP6.69□□□□□ -1.34
Upf3b-201ENSMUST00000076265 Ighv4-1A0A075B5R5 116 aa6.68□□□□□ -1.34
Upf3b-201ENSMUST00000076265 Gm10542F6XDR3 90 aa6.68□□□□□ -1.34
Upf3b-201ENSMUST00000076265 Gm21874J3QNZ6 232 aa6.68□□□□□ -1.34
Upf3b-201ENSMUST00000076265 Smim26Q3V460 107 aa6.68□□□□□ -1.34
Upf3b-201ENSMUST00000076265 BC049762Q8C601 163 aa6.68□□□□□ -1.34
Upf3b-201ENSMUST00000076265 Scrt1Q99M85 348 aa6.68□□□□□ -1.34
Upf3b-201ENSMUST00000076265 4933415A04RikQ9D443 101 aa6.68□□□□□ -1.34
Upf3b-201ENSMUST00000076265 Sec16aA2AIX1 2377 aa6.68□□□□□ -1.34
Upf3b-201ENSMUST00000076265 Gm15737D3YZR0 106 aa6.68□□□□□ -1.34
Upf3b-201ENSMUST00000076265 P06321 130 aa6.68□□□□□ -1.34
Upf3b-201ENSMUST00000076265 Fam19a3Q7TPG6 132 aa6.68□□□□□ -1.34
Upf3b-201ENSMUST00000076265 Tmem204Q7TQI0 226 aa6.68□□□□□ -1.34
Upf3b-201ENSMUST00000076265 TprkbQ8QZZ7 175 aa6.68□□□□□ -1.34
Upf3b-201ENSMUST00000076265 Gm16686Q3UMN9 131 aa6.67□□□□□ -1.34
Upf3b-201ENSMUST00000076265 Olfr922Q8VG50 311 aa6.67□□□□□ -1.34
Upf3b-201ENSMUST00000076265 Krtap15-1Q9QZU5 150 aa6.67□□□□□ -1.34
Upf3b-201ENSMUST00000076265 Ascc3E9PZJ8 2198 aaKnown RBP6.67□□□□□ -1.34
Upf3b-201ENSMUST00000076265 Pkd1l2Q7TN88 2461 aa6.67□□□□□ -1.34
Upf3b-201ENSMUST00000076265 Gm27021M0QWE2 156 aa6.67□□□□□ -1.34
Upf3b-201ENSMUST00000076265 S100a10P08207 97 aa6.67□□□□□ -1.34
Upf3b-201ENSMUST00000076265 Cxcl16Q8BSU2 246 aa6.67□□□□□ -1.34
Upf3b-201ENSMUST00000076265 Spint4Q9D263 159 aa6.67□□□□□ -1.34
Upf3b-201ENSMUST00000076265 PoleQ9WVF7 2283 aa6.67□□□□□ -1.34
Upf3b-201ENSMUST00000076265 AtrxQ61687 2476 aaKnown RBP6.66□□□□□ -1.34
Upf3b-201ENSMUST00000076265 Ighv5-16A0A0B4J1P4 117 aa6.66□□□□□ -1.34
Upf3b-201ENSMUST00000076265 Ighv8-12A0A0G2JDE1 119 aa6.66□□□□□ -1.34
Upf3b-201ENSMUST00000076265 OdamA1E960 273 aa6.66□□□□□ -1.34
Upf3b-201ENSMUST00000076265 Krtap24-1G3X9A2 248 aa6.66□□□□□ -1.34
Upf3b-201ENSMUST00000076265 Fut1O09160 376 aa6.66□□□□□ -1.34
Upf3b-201ENSMUST00000076265 Ccl9P51670 122 aa6.66□□□□□ -1.34
Upf3b-201ENSMUST00000076265 Tcrg-C2A0A075B5Z2 167 aa6.66□□□□□ -1.34
Upf3b-201ENSMUST00000076265 P01790 122 aa6.66□□□□□ -1.34
Upf3b-201ENSMUST00000076265 P01853 167 aa6.66□□□□□ -1.34
Upf3b-201ENSMUST00000076265 Cdk5r1P61809 307 aa6.66□□□□□ -1.34
Upf3b-201ENSMUST00000076265 Lyzl6Q9DA11 148 aa6.66□□□□□ -1.34
Upf3b-201ENSMUST00000076265 Rnase4Q9JJH1 148 aa6.66□□□□□ -1.34
Upf3b-201ENSMUST00000076265 DptQ9QZZ6 201 aa6.66□□□□□ -1.34
Upf3b-201ENSMUST00000076265 Trav14-1A0A0G2JF94 121 aa6.65□□□□□ -1.34
Upf3b-201ENSMUST00000076265 Trav15d-2-dv6d-2A0A0G2JGQ7 117 aa6.65□□□□□ -1.34
Upf3b-201ENSMUST00000076265 Gm28044L7N1X0 119 aa6.65□□□□□ -1.34
Upf3b-201ENSMUST00000076265 Adcyap1O70176 175 aa6.65□□□□□ -1.34
Upf3b-201ENSMUST00000076265 Atxn7l3bQ3UD01 97 aa6.65□□□□□ -1.34
Upf3b-201ENSMUST00000076265 Gm7534Q3UU21 679 aa6.65□□□□□ -1.34
Upf3b-201ENSMUST00000076265 Olfr967Q7TRA6 310 aa6.65□□□□□ -1.34
Upf3b-201ENSMUST00000076265 Dleu7Q8CHZ8 209 aa6.65□□□□□ -1.34
Upf3b-201ENSMUST00000076265 Prelid3aQ8VE85 172 aa6.65□□□□□ -1.34
Upf3b-201ENSMUST00000076265 Timm17aQ9Z0V8 171 aa6.65□□□□□ -1.34
Upf3b-201ENSMUST00000076265 Gm884A2A9H6 3643 aa6.65□□□□□ -1.34
Retrieved 100 of 22,080 RNA–protein pairs in 42.6 ms