Protein–RNA interactions for Protein: A0A0G2JGQ7

Trav15d-2-dv6d-2, T cell receptor alpha variable 15D-2-DV6D-2 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm25239-201ENSMUST00000174915 86 ntBASIC31,22■■■□□ 2,59
Trav15d-2-dv6d-2A0A0G2JGQ7 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC30,45■■■□□ 2,47
Trav15d-2-dv6d-2A0A0G2JGQ7 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC29,51■■■□□ 2,31
Trav15d-2-dv6d-2A0A0G2JGQ7 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC29,42■■■□□ 2,3
Trav15d-2-dv6d-2A0A0G2JGQ7 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC28,54■■■□□ 2,16
Trav15d-2-dv6d-2A0A0G2JGQ7 Psd-208ENSMUST00000224556 2034 ntBASIC28,43■■■□□ 2,14
Trav15d-2-dv6d-2A0A0G2JGQ7 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC28,25■■■□□ 2,11
Trav15d-2-dv6d-2A0A0G2JGQ7 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC28,13■■■□□ 2,09
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm15042-201ENSMUST00000120212 883 ntBASIC27,95■■■□□ 2,06
Trav15d-2-dv6d-2A0A0G2JGQ7 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC27,77■■■□□ 2,04
Trav15d-2-dv6d-2A0A0G2JGQ7 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC27,56■■■□□ 2
Trav15d-2-dv6d-2A0A0G2JGQ7 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC27,56■■■□□ 2
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm15045-201ENSMUST00000117359 883 ntBASIC27,46■■□□□ 1,99
Trav15d-2-dv6d-2A0A0G2JGQ7 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC27,41■■□□□ 1,98
Trav15d-2-dv6d-2A0A0G2JGQ7 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC27,31■■□□□ 1,96
Trav15d-2-dv6d-2A0A0G2JGQ7 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC27,26■■□□□ 1,95
Trav15d-2-dv6d-2A0A0G2JGQ7 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC27,24■■□□□ 1,95
Trav15d-2-dv6d-2A0A0G2JGQ7 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC27,2■■□□□ 1,94
Trav15d-2-dv6d-2A0A0G2JGQ7 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC26,98■■□□□ 1,91
Trav15d-2-dv6d-2A0A0G2JGQ7 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC26,84■■□□□ 1,89
Trav15d-2-dv6d-2A0A0G2JGQ7 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC26,77■■□□□ 1,88
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm24109-201ENSMUST00000175489 103 ntBASIC26,76■■□□□ 1,87
Trav15d-2-dv6d-2A0A0G2JGQ7 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC26,73■■□□□ 1,87
Trav15d-2-dv6d-2A0A0G2JGQ7 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC26,7■■□□□ 1,86
Trav15d-2-dv6d-2A0A0G2JGQ7 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC26,68■■□□□ 1,86
Trav15d-2-dv6d-2A0A0G2JGQ7 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC26,63■■□□□ 1,85
Trav15d-2-dv6d-2A0A0G2JGQ7 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC26,63■■□□□ 1,85
Trav15d-2-dv6d-2A0A0G2JGQ7 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC26,6■■□□□ 1,85
Trav15d-2-dv6d-2A0A0G2JGQ7 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC26,52■■□□□ 1,84
Trav15d-2-dv6d-2A0A0G2JGQ7 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC26,43■■□□□ 1,82
Trav15d-2-dv6d-2A0A0G2JGQ7 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC26,41■■□□□ 1,82
Trav15d-2-dv6d-2A0A0G2JGQ7 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC26,36■■□□□ 1,81
Trav15d-2-dv6d-2A0A0G2JGQ7 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC26,34■■□□□ 1,81
Trav15d-2-dv6d-2A0A0G2JGQ7 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC26,31■■□□□ 1,8
Trav15d-2-dv6d-2A0A0G2JGQ7 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC26,3■■□□□ 1,8
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm23366-201ENSMUST00000175022 89 ntBASIC26,18■■□□□ 1,78
Trav15d-2-dv6d-2A0A0G2JGQ7 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC26,18■■□□□ 1,78
Trav15d-2-dv6d-2A0A0G2JGQ7 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC26,06■■□□□ 1,76
Trav15d-2-dv6d-2A0A0G2JGQ7 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC26,06■■□□□ 1,76
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC26,04■■□□□ 1,76
Trav15d-2-dv6d-2A0A0G2JGQ7 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC26,02■■□□□ 1,76
Trav15d-2-dv6d-2A0A0G2JGQ7 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1,75
Trav15d-2-dv6d-2A0A0G2JGQ7 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC25,97■■□□□ 1,75
Trav15d-2-dv6d-2A0A0G2JGQ7 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC25,94■■□□□ 1,74
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm10524-201ENSMUST00000181931 1893 ntBASIC25,91■■□□□ 1,74
Trav15d-2-dv6d-2A0A0G2JGQ7 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC25,9■■□□□ 1,74
Trav15d-2-dv6d-2A0A0G2JGQ7 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC25,84■■□□□ 1,73
Trav15d-2-dv6d-2A0A0G2JGQ7 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC25,75■■□□□ 1,71
Trav15d-2-dv6d-2A0A0G2JGQ7 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC25,69■■□□□ 1,7
Trav15d-2-dv6d-2A0A0G2JGQ7 AC153911.1-202ENSMUST00000218534 1034 ntBASIC25,68■■□□□ 1,7
Trav15d-2-dv6d-2A0A0G2JGQ7 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC25,56■■□□□ 1,68
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC25,42■■□□□ 1,66
Trav15d-2-dv6d-2A0A0G2JGQ7 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC25,41■■□□□ 1,66
Trav15d-2-dv6d-2A0A0G2JGQ7 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC25,34■■□□□ 1,65
Trav15d-2-dv6d-2A0A0G2JGQ7 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC25,32■■□□□ 1,64
Trav15d-2-dv6d-2A0A0G2JGQ7 CT025624.2-201ENSMUST00000223609 1909 ntBASIC25,26■■□□□ 1,63
Trav15d-2-dv6d-2A0A0G2JGQ7 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC25,25■■□□□ 1,63
Trav15d-2-dv6d-2A0A0G2JGQ7 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC25,19■■□□□ 1,62
Trav15d-2-dv6d-2A0A0G2JGQ7 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC25,17■■□□□ 1,62
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm42596-201ENSMUST00000196305 1958 ntBASIC25,14■■□□□ 1,62
Trav15d-2-dv6d-2A0A0G2JGQ7 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC25,1■■□□□ 1,61
Trav15d-2-dv6d-2A0A0G2JGQ7 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC25,08■■□□□ 1,61
Trav15d-2-dv6d-2A0A0G2JGQ7 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC25,08■■□□□ 1,61
Trav15d-2-dv6d-2A0A0G2JGQ7 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC25,07■■□□□ 1,6
Trav15d-2-dv6d-2A0A0G2JGQ7 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC25,06■■□□□ 1,6
Trav15d-2-dv6d-2A0A0G2JGQ7 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC25,05■■□□□ 1,6
Trav15d-2-dv6d-2A0A0G2JGQ7 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC25,02■■□□□ 1,6
Trav15d-2-dv6d-2A0A0G2JGQ7 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC25,01■■□□□ 1,59
Trav15d-2-dv6d-2A0A0G2JGQ7 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC24,97■■□□□ 1,59
Trav15d-2-dv6d-2A0A0G2JGQ7 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC24,97■■□□□ 1,59
Trav15d-2-dv6d-2A0A0G2JGQ7 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC24,95■■□□□ 1,59
Trav15d-2-dv6d-2A0A0G2JGQ7 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC24,89■■□□□ 1,58
Trav15d-2-dv6d-2A0A0G2JGQ7 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC24,86■■□□□ 1,57
Trav15d-2-dv6d-2A0A0G2JGQ7 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC24,8■■□□□ 1,56
Trav15d-2-dv6d-2A0A0G2JGQ7 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC24,75■■□□□ 1,55
Trav15d-2-dv6d-2A0A0G2JGQ7 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC24,75■■□□□ 1,55
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC24,73■■□□□ 1,55
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC24,67■■□□□ 1,54
Trav15d-2-dv6d-2A0A0G2JGQ7 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC24,67■■□□□ 1,54
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm27325-201ENSMUST00000175467 74 ntBASIC24,64■■□□□ 1,54
Trav15d-2-dv6d-2A0A0G2JGQ7 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC24,64■■□□□ 1,54
Trav15d-2-dv6d-2A0A0G2JGQ7 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC24,6■■□□□ 1,53
Trav15d-2-dv6d-2A0A0G2JGQ7 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC24,59■■□□□ 1,53
Trav15d-2-dv6d-2A0A0G2JGQ7 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC24,58■■□□□ 1,53
Trav15d-2-dv6d-2A0A0G2JGQ7 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC24,53■■□□□ 1,52
Trav15d-2-dv6d-2A0A0G2JGQ7 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC24,52■■□□□ 1,52
Trav15d-2-dv6d-2A0A0G2JGQ7 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC24,51■■□□□ 1,51
Trav15d-2-dv6d-2A0A0G2JGQ7 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC24,48■■□□□ 1,51
Trav15d-2-dv6d-2A0A0G2JGQ7 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC24,48■■□□□ 1,51
Trav15d-2-dv6d-2A0A0G2JGQ7 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC24,46■■□□□ 1,51
Trav15d-2-dv6d-2A0A0G2JGQ7 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC24,45■■□□□ 1,5
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm25238-201ENSMUST00000174914 89 ntBASIC24,43■■□□□ 1,5
Trav15d-2-dv6d-2A0A0G2JGQ7 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC24,42■■□□□ 1,5
Trav15d-2-dv6d-2A0A0G2JGQ7 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC24,42■■□□□ 1,5
Trav15d-2-dv6d-2A0A0G2JGQ7 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC24,41■■□□□ 1,5
Trav15d-2-dv6d-2A0A0G2JGQ7 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC24,37■■□□□ 1,49
Trav15d-2-dv6d-2A0A0G2JGQ7 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC24,36■■□□□ 1,49
Trav15d-2-dv6d-2A0A0G2JGQ7 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC24,33■■□□□ 1,49
Trav15d-2-dv6d-2A0A0G2JGQ7 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC24,33■■□□□ 1,49
Trav15d-2-dv6d-2A0A0G2JGQ7 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC24,3■■□□□ 1,48
Retrieved 100 of 76,532 protein–RNA pairs in 9,7 ms