RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 Xlr5cQ9JJR2 179 aa9.31□□□□□ -0.92
Pcif1-201ENSMUST00000041643 Omt2bD3YX29 119 aa9.31□□□□□ -0.92
Pcif1-201ENSMUST00000041643 Saa3P04918 122 aa9.31□□□□□ -0.92
Pcif1-201ENSMUST00000041643 Sslp1Q3UN54 99 aa9.31□□□□□ -0.92
Pcif1-201ENSMUST00000041643 Gm6040Q4QY32 63 aa9.31□□□□□ -0.92
Pcif1-201ENSMUST00000041643 Tln2Q71LX4 2375 aa9.31□□□□□ -0.92
Pcif1-201ENSMUST00000041643 Synj2bpQ9D6K5 145 aa9.31□□□□□ -0.92
Pcif1-201ENSMUST00000041643 Ighv1-49A0A0A6YWX2 117 aa9.31□□□□□ -0.92
Pcif1-201ENSMUST00000041643 Cd69P37217 199 aa9.31□□□□□ -0.92
Pcif1-201ENSMUST00000041643 Gm35549A0A0N4SUS7 141 aa9.31□□□□□ -0.92
Pcif1-201ENSMUST00000041643 Jpt2Q6PGH2 190 aaKnown RBP9.31□□□□□ -0.92
Pcif1-201ENSMUST00000041643 Zfp119aQ9JIC0 545 aa9.31□□□□□ -0.92
Pcif1-201ENSMUST00000041643 Ighv1-64A0A075B5X3 117 aa9.3□□□□□ -0.92
Pcif1-201ENSMUST00000041643 Gm10553J3QPF1 123 aa9.3□□□□□ -0.92
Pcif1-201ENSMUST00000041643 Pfn1P62962 140 aa9.3□□□□□ -0.92
Pcif1-201ENSMUST00000041643 Htr1dQ61224 374 aa9.3□□□□□ -0.92
Pcif1-201ENSMUST00000041643 Med12lQ8BQM9 2157 aa9.3□□□□□ -0.92
Pcif1-201ENSMUST00000041643 Rpl36aP83882 106 aaKnown RBP9.3□□□□□ -0.92
Pcif1-201ENSMUST00000041643 Defa24Q5G865 93 aa9.3□□□□□ -0.92
Pcif1-201ENSMUST00000041643 Wipf2Q6PEV3 440 aa9.3□□□□□ -0.92
Pcif1-201ENSMUST00000041643 Gpx7Q99LJ6 186 aa9.3□□□□□ -0.92
Pcif1-201ENSMUST00000041643 Mrpl20Q9CQL4 149 aa9.3□□□□□ -0.92
Pcif1-201ENSMUST00000041643 EsdQ9R0P3 282 aa9.3□□□□□ -0.92
Pcif1-201ENSMUST00000041643 Nat8b-psE0CYC6 232 aa9.3□□□□□ -0.92
Pcif1-201ENSMUST00000041643 Polr3kQ9CQZ7 108 aa9.3□□□□□ -0.92
Pcif1-201ENSMUST00000041643 SlpiP97430 131 aa9.29□□□□□ -0.92
Pcif1-201ENSMUST00000041643 C730034F03RikQ8BGL5 111 aa9.29□□□□□ -0.92
Pcif1-201ENSMUST00000041643 Erg28Q9ERY9 140 aa9.29□□□□□ -0.92
Pcif1-201ENSMUST00000041643 Scgb1b11A0A087WQJ0 93 aa9.29□□□□□ -0.92
Pcif1-201ENSMUST00000041643 Gm5129F6YHA9 99 aa9.29□□□□□ -0.92
Pcif1-201ENSMUST00000041643 Cox7a2lQ61387 111 aa9.29□□□□□ -0.92
Pcif1-201ENSMUST00000041643 PdpnQ62011 172 aa9.29□□□□□ -0.92
Pcif1-201ENSMUST00000041643 OpalinQ7M750 143 aa9.29□□□□□ -0.92
Pcif1-201ENSMUST00000041643 Trdv2-1A0A0G2JGB9 116 aa9.29□□□□□ -0.92
Pcif1-201ENSMUST00000041643 Gm9958Q8C9U4 106 aa9.29□□□□□ -0.92
Pcif1-201ENSMUST00000041643 Rnf114Q9ET26 229 aa9.29□□□□□ -0.92
Pcif1-201ENSMUST00000041643 OtorQ9JIE3 128 aa9.29□□□□□ -0.92
Pcif1-201ENSMUST00000041643 Lcn2P11672 200 aa9.28□□□□□ -0.92
Pcif1-201ENSMUST00000041643 Col13a1Q9R1N9 751 aa9.28□□□□□ -0.92
Pcif1-201ENSMUST00000041643 Wisp2Q9Z0G4 251 aa9.28□□□□□ -0.92
Pcif1-201ENSMUST00000041643 Ighv1-52A0A0A6YXC3 117 aa9.28□□□□□ -0.92
Pcif1-201ENSMUST00000041643 Gm45521A0A1B0GRK0 198 aa9.28□□□□□ -0.92
Pcif1-201ENSMUST00000041643 Lmo4P61969 165 aa9.28□□□□□ -0.92
Pcif1-201ENSMUST00000041643 Tex26Q0VB26 296 aa9.28□□□□□ -0.92
Pcif1-201ENSMUST00000041643 Atxn7l1Q9CZ05 146 aa9.28□□□□□ -0.92
Pcif1-201ENSMUST00000041643 Ighv3-1A0A075B5S6 116 aa9.28□□□□□ -0.92
Pcif1-201ENSMUST00000041643 Igkv4-81A0A0G2JEY5 119 aa9.28□□□□□ -0.92
Pcif1-201ENSMUST00000041643 Gm20458E9PXJ7 78 aa9.28□□□□□ -0.92
Pcif1-201ENSMUST00000041643 Higd1aQ9JLR9 95 aa9.28□□□□□ -0.92
Pcif1-201ENSMUST00000041643 P01739 132 aa9.27□□□□□ -0.92
Pcif1-201ENSMUST00000041643 Sptbn1Q62261 2363 aaKnown RBP9.27□□□□□ -0.92
Pcif1-201ENSMUST00000041643 Defa26Q3L180 93 aa9.27□□□□□ -0.93
Pcif1-201ENSMUST00000041643 Trav3-3Q5R1C3 114 aa9.27□□□□□ -0.93
Pcif1-201ENSMUST00000041643 Lyzl1Q9CPX3 148 aa9.27□□□□□ -0.93
Pcif1-201ENSMUST00000041643 UrahQ9CRB3 118 aa9.27□□□□□ -0.93
Pcif1-201ENSMUST00000041643 Tcl1b4P56844 120 aa9.27□□□□□ -0.93
Pcif1-201ENSMUST00000041643 Tcrg-C1A0A075B5Z0 172 aa9.27□□□□□ -0.93
Pcif1-201ENSMUST00000041643 Tcrg-C3L7N479 172 aa9.27□□□□□ -0.93
Pcif1-201ENSMUST00000041643 Gm815Q3UWS2 115 aa9.27□□□□□ -0.93
Pcif1-201ENSMUST00000041643 Klk1b4P00757 256 aa9.27□□□□□ -0.93
Pcif1-201ENSMUST00000041643 P06330 118 aa9.27□□□□□ -0.93
Pcif1-201ENSMUST00000041643 Cysrt1Q9D1E4 142 aa9.27□□□□□ -0.93
Pcif1-201ENSMUST00000041643 Gm10638F6QEG2 257 aa9.26□□□□□ -0.93
Pcif1-201ENSMUST00000041643 Il22ra2Q80XF5 230 aa9.26□□□□□ -0.93
Pcif1-201ENSMUST00000041643 Esp24A8R0V6 68 aa9.26□□□□□ -0.93
Pcif1-201ENSMUST00000041643 Igkv1-99F6XWB2 120 aa9.26□□□□□ -0.93
Pcif1-201ENSMUST00000041643 TirapQ99JY1 241 aa9.26□□□□□ -0.93
Pcif1-201ENSMUST00000041643 Ighv1-50A0A075B5W1 117 aa9.26□□□□□ -0.93
Pcif1-201ENSMUST00000041643 PmvkQ9D1G2 192 aa9.26□□□□□ -0.93
Pcif1-201ENSMUST00000041643 Mzt1Q8BUR9 78 aa9.26□□□□□ -0.93
Pcif1-201ENSMUST00000041643 Wfdc15bQ9JHY4 80 aa9.26□□□□□ -0.93
Pcif1-201ENSMUST00000041643 Tcrg-V4A0A0B4J1J8 138 aa9.26□□□□□ -0.93
Pcif1-201ENSMUST00000041643 4930596D02RikQ3V0H9 216 aa9.26□□□□□ -0.93
Pcif1-201ENSMUST00000041643 Zfand3Q497H0 227 aa9.26□□□□□ -0.93
Pcif1-201ENSMUST00000041643 Snx22Q8C084 192 aa9.26□□□□□ -0.93
Pcif1-201ENSMUST00000041643 Fam208bQ5DTT3 2382 aa9.25□□□□□ -0.93
Pcif1-201ENSMUST00000041643 Col27a1Q5QNQ9 1845 aa9.25□□□□□ -0.93
Pcif1-201ENSMUST00000041643 E130116L18RikQ8BMV6 101 aa9.25□□□□□ -0.93
Pcif1-201ENSMUST00000041643 P01738 130 aa9.25□□□□□ -0.93
Pcif1-201ENSMUST00000041643 Wipf1Q8K1I7 493 aa9.25□□□□□ -0.93
Pcif1-201ENSMUST00000041643 Bex1Q9R224 128 aa9.25□□□□□ -0.93
Pcif1-201ENSMUST00000041643 Trav9-2A0A075B647 113 aa9.25□□□□□ -0.93
Pcif1-201ENSMUST00000041643 Trav9-4A0A0B4J1K2 113 aa9.25□□□□□ -0.93
Pcif1-201ENSMUST00000041643 Klf12O35738 402 aa9.25□□□□□ -0.93
Pcif1-201ENSMUST00000041643 Bles03Q8VD62 251 aa9.25□□□□□ -0.93
Pcif1-201ENSMUST00000041643 Dmrtc1c1Q9D410 238 aa9.25□□□□□ -0.93
Pcif1-201ENSMUST00000041643 CenpeQ6RT24 2474 aaKnown RBP9.25□□□□□ -0.93
Pcif1-201ENSMUST00000041643 Slc25a48Q8BW66 306 aa9.24□□□□□ -0.93
Pcif1-201ENSMUST00000041643 Mapk1ip1Q9D7G9 263 aa9.24□□□□□ -0.93
Pcif1-201ENSMUST00000041643 HilpdaQ9JLS0 64 aa9.24□□□□□ -0.93
Pcif1-201ENSMUST00000041643 Vmo1Q5SXG7 201 aa9.24□□□□□ -0.93
Pcif1-201ENSMUST00000041643 Them7Q9DCP4 223 aa9.24□□□□□ -0.93
Pcif1-201ENSMUST00000041643 Atp6v0bQ91V37 205 aa9.24□□□□□ -0.93
Pcif1-201ENSMUST00000041643 Cited2O35740 269 aa9.24□□□□□ -0.93
Pcif1-201ENSMUST00000041643 Gm5941Q497P9 117 aa9.24□□□□□ -0.93
Pcif1-201ENSMUST00000041643 Cphx2Q8BX39 182 aa9.24□□□□□ -0.93
Pcif1-201ENSMUST00000041643 Dmrtc2Q8CGW9 370 aa9.24□□□□□ -0.93
Pcif1-201ENSMUST00000041643 Gm1553Q66VB7 94 aa9.23□□□□□ -0.93
Pcif1-201ENSMUST00000041643 Cyyr1Q8VIH7 165 aa9.23□□□□□ -0.93
Pcif1-201ENSMUST00000041643 Gm26938S4R185 226 aa9.23□□□□□ -0.93
Retrieved 100 of 22,080 RNA–protein pairs in 170.6 ms