RNA–Protein interactions for RNA: ENSMUST00000004949.7

Traf6-201, Transcript of TNF receptor-associated factor 6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Traf6, Length 6,169 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Traf6-201ENSMUST00000004949 Gm1553Q66VB7 94 aa10.46□□□□□ -0.74
Traf6-201ENSMUST00000004949 Cphx2Q8BX39 182 aa10.46□□□□□ -0.74
Traf6-201ENSMUST00000004949 Hist1h2bkQ8CGP1 126 aaKnown RBP10.46□□□□□ -0.74
Traf6-201ENSMUST00000004949 Hist1h2bpQ8CGP2 126 aaKnown RBP10.46□□□□□ -0.74
Traf6-201ENSMUST00000004949 CklfQ9DAS1 152 aa10.46□□□□□ -0.74
Traf6-201ENSMUST00000004949 Tcl1b4P56844 120 aa10.46□□□□□ -0.74
Traf6-201ENSMUST00000004949 Cdk2ap2Q9CPY4 127 aa10.46□□□□□ -0.74
Traf6-201ENSMUST00000004949 Mrpl53Q9D1H8 118 aaKnown RBP10.46□□□□□ -0.74
Traf6-201ENSMUST00000004949 Spata25Q9DA57 226 aa10.45□□□□□ -0.74
Traf6-201ENSMUST00000004949 Prop1P97458 223 aa10.45□□□□□ -0.74
Traf6-201ENSMUST00000004949 Supt4h1bQ9Z199 117 aa10.45□□□□□ -0.74
Traf6-201ENSMUST00000004949 Ighv1-74A0A0G2JGK2 117 aa10.45□□□□□ -0.74
Traf6-201ENSMUST00000004949 Nsun4C4P6S0 806 aaKnown RBP10.45□□□□□ -0.74
Traf6-201ENSMUST00000004949 Gm20458E9PXJ7 78 aa10.45□□□□□ -0.74
Traf6-201ENSMUST00000004949 PlnP61014 52 aa10.45□□□□□ -0.74
Traf6-201ENSMUST00000004949 Mbd6Q3TY92 1003 aa10.45□□□□□ -0.74
Traf6-201ENSMUST00000004949 Klf13Q9JJZ6 289 aa10.45□□□□□ -0.74
Traf6-201ENSMUST00000004949 Ighv1-4A0A075B5T4 117 aa10.45□□□□□ -0.74
Traf6-201ENSMUST00000004949 P0C1Z5 52 aa10.45□□□□□ -0.74
Traf6-201ENSMUST00000004949 Gm11444F6QMA6 170 aa10.44□□□□□ -0.74
Traf6-201ENSMUST00000004949 Pcnx3Q8VI59 2028 aa10.44□□□□□ -0.74
Traf6-201ENSMUST00000004949 9430097D07RikQ8BS47 195 aa10.44□□□□□ -0.74
Traf6-201ENSMUST00000004949 Olfr33Q8VGX7 318 aa10.44□□□□□ -0.74
Traf6-201ENSMUST00000004949 Spata45Q9CVW4 97 aa10.44□□□□□ -0.74
Traf6-201ENSMUST00000004949 Gm27027S4R1M6 97 aa10.44□□□□□ -0.74
Traf6-201ENSMUST00000004949 Dido1Q8C9B9 2256 aaKnown RBP10.44□□□□□ -0.74
Traf6-201ENSMUST00000004949 Trav14n-3A0A075B645 120 aa10.44□□□□□ -0.74
Traf6-201ENSMUST00000004949 Lgals6O54891 301 aa10.44□□□□□ -0.74
Traf6-201ENSMUST00000004949 Megf10Q6DIB5 1147 aa10.44□□□□□ -0.74
Traf6-201ENSMUST00000004949 Olfr498Q8VEW2 330 aa10.44□□□□□ -0.74
Traf6-201ENSMUST00000004949 Fam24aQ8CF27 98 aa10.43□□□□□ -0.74
Traf6-201ENSMUST00000004949 PtprsB0V2N1 1907 aa10.43□□□□□ -0.74
Traf6-201ENSMUST00000004949 Tmem141A2AJB2 108 aa10.43□□□□□ -0.74
Traf6-201ENSMUST00000004949 Nxph4G3X9N5 304 aa10.43□□□□□ -0.74
Traf6-201ENSMUST00000004949 Pip4p1Q3TWL2 284 aa10.43□□□□□ -0.74
Traf6-201ENSMUST00000004949 Vmo1Q5SXG7 201 aa10.43□□□□□ -0.74
Traf6-201ENSMUST00000004949 Rnf114Q9ET26 229 aa10.43□□□□□ -0.74
Traf6-201ENSMUST00000004949 Pde6hP61249 83 aa10.43□□□□□ -0.74
Traf6-201ENSMUST00000004949 Fer1l4A3KGK3 1992 aa10.43□□□□□ -0.74
Traf6-201ENSMUST00000004949 Igkv3-2A0A075B5P0 119 aa10.43□□□□□ -0.74
Traf6-201ENSMUST00000004949 Gtsf1Q9DAN6 167 aa10.42□□□□□ -0.74
Traf6-201ENSMUST00000004949 Gm815Q3UWS2 115 aa10.42□□□□□ -0.74
Traf6-201ENSMUST00000004949 Hist3h2bbQ8CGP0 126 aa10.42□□□□□ -0.74
Traf6-201ENSMUST00000004949 8030423J24RikQ9CX45 142 aa10.42□□□□□ -0.74
Traf6-201ENSMUST00000004949 Hist3h2baQ9D2U9 126 aa10.42□□□□□ -0.74
Traf6-201ENSMUST00000004949 PmvkQ9D1G2 192 aa10.42□□□□□ -0.74
Traf6-201ENSMUST00000004949 P01786 117 aa10.42□□□□□ -0.74
Traf6-201ENSMUST00000004949 Id3P41133 119 aa10.42□□□□□ -0.74
Traf6-201ENSMUST00000004949 Synj2bpQ9D6K5 145 aa10.42□□□□□ -0.74
Traf6-201ENSMUST00000004949 Zic4Q61467 341 aa10.41□□□□□ -0.74
Traf6-201ENSMUST00000004949 Gm29289A0A087WPY7 166 aa10.41□□□□□ -0.74
Traf6-201ENSMUST00000004949 Gm4064A0A087WR82 380 aa10.41□□□□□ -0.74
Traf6-201ENSMUST00000004949 Gm10352B2RWR6 380 aa10.41□□□□□ -0.74
Traf6-201ENSMUST00000004949 Gm21693J3QK27 380 aa10.41□□□□□ -0.74
Traf6-201ENSMUST00000004949 Rbmy1a1O35698 380 aa10.41□□□□□ -0.74
Traf6-201ENSMUST00000004949 Igkv4-81A0A0G2JEY5 119 aa10.41□□□□□ -0.74
Traf6-201ENSMUST00000004949 P04940 107 aa10.41□□□□□ -0.74
Traf6-201ENSMUST00000004949 P04941 107 aa10.41□□□□□ -0.74
Traf6-201ENSMUST00000004949 Lcn2P11672 200 aa10.41□□□□□ -0.74
Traf6-201ENSMUST00000004949 Mzt1Q8BUR9 78 aa10.41□□□□□ -0.74
Traf6-201ENSMUST00000004949 Atp5iQ06185 71 aaKnown RBP10.41□□□□□ -0.74
Traf6-201ENSMUST00000004949 Nbl1Q61477 178 aa10.41□□□□□ -0.74
Traf6-201ENSMUST00000004949 Rs1Q9Z1L4 224 aa10.41□□□□□ -0.74
Traf6-201ENSMUST00000004949 1700020N15RikL7MTX3 112 aa10.41□□□□□ -0.74
Traf6-201ENSMUST00000004949 Bcl6bO88282 474 aa10.41□□□□□ -0.74
Traf6-201ENSMUST00000004949 D130052B06RikQ3UW13 202 aa10.41□□□□□ -0.74
Traf6-201ENSMUST00000004949 Gm9949Q8C9F4 104 aa10.4□□□□□ -0.74
Traf6-201ENSMUST00000004949 Tnfrsf13bQ9ET35 249 aa10.4□□□□□ -0.74
Traf6-201ENSMUST00000004949 Ighv1-19A0A0A6YWX0 117 aa10.4□□□□□ -0.74
Traf6-201ENSMUST00000004949 Mrpl20Q9CQL4 149 aa10.4□□□□□ -0.74
Traf6-201ENSMUST00000004949 CompQ9R0G6 755 aa10.4□□□□□ -0.74
Traf6-201ENSMUST00000004949 Cks1bP61025 79 aa10.4□□□□□ -0.74
Traf6-201ENSMUST00000004949 Tex26Q0VB26 296 aa10.4□□□□□ -0.74
Traf6-201ENSMUST00000004949 Atp6v0bQ91V37 205 aa10.4□□□□□ -0.74
Traf6-201ENSMUST00000004949 Sdk1Q3UH53 2193 aa10.4□□□□□ -0.74
Traf6-201ENSMUST00000004949 Rp1l1Q8CGM2 1859 aa10.4□□□□□ -0.74
Traf6-201ENSMUST00000004949 SeboxP70368 190 aa10.4□□□□□ -0.74
Traf6-201ENSMUST00000004949 A230072I06RikQ3UUJ8 172 aa10.4□□□□□ -0.74
Traf6-201ENSMUST00000004949 Cox6cQ9CPQ1 76 aa10.39□□□□□ -0.75
Traf6-201ENSMUST00000004949 Polr3kQ9CQZ7 108 aa10.39□□□□□ -0.75
Traf6-201ENSMUST00000004949 Notch3Q61982 2318 aa10.39□□□□□ -0.75
Traf6-201ENSMUST00000004949 Tex54G3UW99 86 aa10.39□□□□□ -0.75
Traf6-201ENSMUST00000004949 UtrnE9Q6R7 3430 aa10.39□□□□□ -0.75
Traf6-201ENSMUST00000004949 Igkv3-1A0A075B5P1 119 aa10.39□□□□□ -0.75
Traf6-201ENSMUST00000004949 Gm10203F6QJ09 66 aa10.39□□□□□ -0.75
Traf6-201ENSMUST00000004949 Zfp119aQ9JIC0 545 aa10.39□□□□□ -0.75
Traf6-201ENSMUST00000004949 OtorQ9JIE3 128 aa10.39□□□□□ -0.75
Traf6-201ENSMUST00000004949 Dad1P61804 113 aa10.39□□□□□ -0.75
Traf6-201ENSMUST00000004949 SlpiP97430 131 aa10.39□□□□□ -0.75
Traf6-201ENSMUST00000004949 4930596D02RikQ3V0H9 216 aa10.39□□□□□ -0.75
Traf6-201ENSMUST00000004949 Prss58Q8BW11 241 aa10.39□□□□□ -0.75
Traf6-201ENSMUST00000004949 Nit2Q9JHW2 276 aa10.38□□□□□ -0.75
Traf6-201ENSMUST00000004949 P01738 130 aa10.38□□□□□ -0.75
Traf6-201ENSMUST00000004949 Wipf1Q8K1I7 493 aa10.38□□□□□ -0.75
Traf6-201ENSMUST00000004949 Olfr975Q8VG91 310 aa10.38□□□□□ -0.75
Traf6-201ENSMUST00000004949 Prp2P05143 317 aa10.38□□□□□ -0.75
Traf6-201ENSMUST00000004949 Hoxb4P10284 250 aa10.38□□□□□ -0.75
Traf6-201ENSMUST00000004949 P01811 117 aa10.38□□□□□ -0.75
Traf6-201ENSMUST00000004949 Pfn1P62962 140 aa10.38□□□□□ -0.75
Traf6-201ENSMUST00000004949 9130230L23RikQ8CC80 163 aa10.38□□□□□ -0.75
Retrieved 100 of 22,080 RNA–protein pairs in 7.7 ms