RNA–Protein interactions for RNA: ENST00000636183.1

CLN5-208, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLN5, Length 6,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-208ENST00000636183 PP632Q6XCG6 107 aa8.4□□□□□ -1.06
CLN5-208ENST00000636183 HTTP42858 3142 aa8.38□□□□□ -1.07
CLN5-208ENST00000636183 FLNCQ14315 2725 aa8.36□□□□□ -1.07
CLN5-208ENST00000636183 A6NN06 94 aa8.36□□□□□ -1.07
CLN5-208ENST00000636183 TACC2O95359 2948 aa8.32□□□□□ -1.08
CLN5-208ENST00000636183 TRANK1O15050 2925 aa8.31□□□□□ -1.08
CLN5-208ENST00000636183 DMXL2Q8TDJ6 3036 aa8.3□□□□□ -1.08
CLN5-208ENST00000636183 KRTAP13-3Q3SY46 172 aa8.3□□□□□ -1.08
CLN5-208ENST00000636183 APCP25054 2843 aa8.29□□□□□ -1.08
CLN5-208ENST00000636183 HIVEP1P15822 2718 aa8.28□□□□□ -1.08
CLN5-208ENST00000636183 ITPR1Q14643 2758 aa8.27□□□□□ -1.09
CLN5-208ENST00000636183 UTP20O75691 2785 aaKnown RBP8.26□□□□□ -1.09
CLN5-208ENST00000636183 VPS13AQ96RL7 3174 aa8.23□□□□□ -1.09
CLN5-208ENST00000636183 CDH23Q9H251 3354 aa8.22□□□□□ -1.09
CLN5-208ENST00000636183 VCANP13611 3396 aa8.22□□□□□ -1.09
CLN5-208ENST00000636183 CFAP47Q6ZTR5 3102 aa8.18□□□□□ -1.1
CLN5-208ENST00000636183 COL6A3P12111 3177 aa8.17□□□□□ -1.1
CLN5-208ENST00000636183 KALRNO60229 2985 aa8.17□□□□□ -1.1
CLN5-208ENST00000636183 LAMA1P25391 3075 aa8.15□□□□□ -1.1
CLN5-208ENST00000636183 ASH1LQ9NR48 2969 aaKnown RBP8.14□□□□□ -1.11
CLN5-208ENST00000636183 H0YAA0 97 aa8.11□□□□□ -1.11
CLN5-208ENST00000636183 LRBAP50851 2863 aa8.11□□□□□ -1.11
CLN5-208ENST00000636183 COL12A1Q99715 3063 aa8.11□□□□□ -1.11
CLN5-208ENST00000636183 TENM1Q9UKZ4 2725 aa8.07□□□□□ -1.12
CLN5-208ENST00000636183 ATMQ13315 3056 aa8.07□□□□□ -1.12
CLN5-208ENST00000636183 TENM2Q9NT68 2774 aa8.05□□□□□ -1.12
CLN5-208ENST00000636183 SPEGQ15772 3267 aa8.02□□□□□ -1.13
CLN5-208ENST00000636183 FRYLO94915 3013 aa8.02□□□□□ -1.13
CLN5-208ENST00000636183 CRCT1Q9UGL9 99 aa8□□□□□ -1.13
CLN5-208ENST00000636183 DNAH14Q0VDD8 3507 aa7.97□□□□□ -1.13
CLN5-208ENST00000636183 SZT2Q5T011 3432 aa7.95□□□□□ -1.14
CLN5-208ENST00000636183 CELSR2Q9HCU4 2923 aa7.93□□□□□ -1.14
CLN5-208ENST00000636183 EYSQ5T1H1 3165 aa7.93□□□□□ -1.14
CLN5-208ENST00000636183 BOD1L1Q8NFC6 3051 aa7.93□□□□□ -1.14
CLN5-208ENST00000636183 KRTAP12-2P59991 146 aa7.93□□□□□ -1.14
CLN5-208ENST00000636183 TENM3Q9P273 2699 aa7.88□□□□□ -1.15
CLN5-208ENST00000636183 USP34Q70CQ2 3546 aa7.85□□□□□ -1.15
CLN5-208ENST00000636183 KRTAP15-1Q3LI76 137 aa7.84□□□□□ -1.15
CLN5-208ENST00000636183 DCHS2Q6V1P9 2916 aa7.81□□□□□ -1.16
CLN5-208ENST00000636183 NF1P21359 2839 aa7.79□□□□□ -1.16
CLN5-208ENST00000636183 ADGRG4Q8IZF6 3080 aa7.79□□□□□ -1.16
CLN5-208ENST00000636183 MYO15AQ9UKN7 3530 aa7.77□□□□□ -1.16
CLN5-208ENST00000636183 NBEAQ8NFP9 2946 aa7.77□□□□□ -1.17
CLN5-208ENST00000636183 ZZEF1O43149 2961 aa7.77□□□□□ -1.17
CLN5-208ENST00000636183 SPTBN5Q9NRC6 3674 aaKnown RBP7.75□□□□□ -1.17
CLN5-208ENST00000636183 PKD1L1Q8TDX9 2849 aa7.74□□□□□ -1.17
CLN5-208ENST00000636183 KRTAP13-4Q3LI77 160 aa7.7□□□□□ -1.18
CLN5-208ENST00000636183 NIPBLQ6KC79 2804 aaeCLIP7.68□□□□□ -1.18
CLN5-208ENST00000636183 VWFP04275 2813 aa7.64□□□□□ -1.19
CLN5-208ENST00000636183 TNRC18O15417 2968 aaPredicted RBP7.63□□□□□ -1.19
CLN5-208ENST00000636183 CELSR1Q9NYQ6 3014 aa7.61□□□□□ -1.19
CLN5-208ENST00000636183 PDZD2O15018 2839 aa7.6□□□□□ -1.19
CLN5-208ENST00000636183 NBPF19A0A087WUL8 3843 aa7.57□□□□□ -1.2
CLN5-208ENST00000636183 KRTAP12-1P59990 96 aa7.55□□□□□ -1.2
CLN5-208ENST00000636183 TGP01266 2768 aa7.54□□□□□ -1.2
CLN5-208ENST00000636183 DMXL1Q9Y485 3027 aa7.48□□□□□ -1.21
CLN5-208ENST00000636183 MUC3AQ02505 3323 aa7.48□□□□□ -1.21
CLN5-208ENST00000636183 ZANQ9Y493 2812 aa7.46□□□□□ -1.22
CLN5-208ENST00000636183 DMDP11532 3685 aa7.44□□□□□ -1.22
CLN5-208ENST00000636183 ZFHX4Q86UP3 3567 aa7.41□□□□□ -1.22
CLN5-208ENST00000636183 LORP23490 312 aaPredicted RBP7.4□□□□□ -1.22
CLN5-208ENST00000636183 WDFY3Q8IZQ1 3526 aa7.39□□□□□ -1.23
CLN5-208ENST00000636183 FBN2P35556 2912 aa7.38□□□□□ -1.23
CLN5-208ENST00000636183 KRTAP4-5Q9BYR2 181 aa7.38□□□□□ -1.23
CLN5-208ENST00000636183 KRTAP10-12P60413 245 aa7.37□□□□□ -1.23
CLN5-208ENST00000636183 ASPMQ8IZT6 3477 aa7.36□□□□□ -1.23
CLN5-208ENST00000636183 KRTAP3-1Q9BYR8 98 aa7.35□□□□□ -1.23
CLN5-208ENST00000636183 LOC400499M0QZD8 3231 aa7.29□□□□□ -1.24
CLN5-208ENST00000636183 FBN3Q75N90 2809 aa7.28□□□□□ -1.24
CLN5-208ENST00000636183 MT1HL1P0DM35 61 aa7.27□□□□□ -1.25
CLN5-208ENST00000636183 HRNRQ86YZ3 2850 aaPredicted RBP7.26□□□□□ -1.25
CLN5-208ENST00000636183 SRRM2Q9UQ35 2752 aaKnown RBP7.26□□□□□ -1.25
CLN5-208ENST00000636183 DCHS1Q96JQ0 3298 aa7.21□□□□□ -1.25
CLN5-208ENST00000636183 ZFHX3Q15911 3703 aa7.18□□□□□ -1.26
CLN5-208ENST00000636183 RELNP78509 3460 aa7.18□□□□□ -1.26
CLN5-208ENST00000636183 MXRA5Q9NR99 2828 aa7.18□□□□□ -1.26
CLN5-208ENST00000636183 KRTAP8-1Q8IUC2 63 aa7.16□□□□□ -1.26
CLN5-208ENST00000636183 KRTAP10-6P60371 365 aaPredicted RBP7.1□□□□□ -1.27
CLN5-208ENST00000636183 LAMA5O15230 3695 aa7.07□□□□□ -1.28
CLN5-208ENST00000636183 KRTAP10-5P60370 271 aa7.04□□□□□ -1.28
CLN5-208ENST00000636183 KRTAP12-3P60328 96 aa7.03□□□□□ -1.28
CLN5-208ENST00000636183 LCE3AQ5TA76 89 aa6.95□□□□□ -1.3
CLN5-208ENST00000636183 ANK3Q12955 4377 aaKnown RBP6.89□□□□□ -1.31
CLN5-208ENST00000636183 COL7A1Q02388 2944 aa6.89□□□□□ -1.31
CLN5-208ENST00000636183 SPENQ96T58 3664 aaKnown RBP6.88□□□□□ -1.31
CLN5-208ENST00000636183 CSMD1Q96PZ7 3565 aa6.85□□□□□ -1.31
CLN5-208ENST00000636183 MEGF8Q7Z7M0 2845 aa6.84□□□□□ -1.31
CLN5-208ENST00000636183 INE1O15225 51 aa6.83□□□□□ -1.32
CLN5-208ENST00000636183 KRTAP3-3Q9BYR6 98 aa6.82□□□□□ -1.32
CLN5-208ENST00000636183 FBN1P35555 2871 aaKnown RBP6.82□□□□□ -1.32
CLN5-208ENST00000636183 KRTAP3-2Q9BYR7 98 aa6.78□□□□□ -1.32
CLN5-208ENST00000636183 SMG1Q96Q15 3661 aaKnown RBP6.77□□□□□ -1.33
CLN5-208ENST00000636183 KRTAP10-4P60372 401 aaPredicted RBP6.76□□□□□ -1.33
CLN5-208ENST00000636183 SPRR2FQ96RM1 72 aa6.74□□□□□ -1.33
CLN5-208ENST00000636183 ALMS1Q8TCU4 4167 aa6.73□□□□□ -1.33
CLN5-208ENST00000636183 CSMD2Q7Z408 3487 aa6.72□□□□□ -1.33
CLN5-208ENST00000636183 OTOGQ6ZRI0 2925 aa6.71□□□□□ -1.34
CLN5-208ENST00000636183 HUWE1Q7Z6Z7 4374 aaKnown RBP6.68□□□□□ -1.34
CLN5-208ENST00000636183 TRRAPQ9Y4A5 3859 aa6.64□□□□□ -1.35
CLN5-208ENST00000636183 KRTAP10-7P60409 375 aaPredicted RBP6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms