RNA–Protein interactions for RNA: ENST00000620033.4

CHL1-216, Transcript of cell adhesion molecule L1 like, humanhuman

TSL 1 (best) BASIC

Gene CHL1, Length 7,311 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1-216ENST00000620033 LAMA1P25391 3075 aa2.16□□□□□ -2.06
CHL1-216ENST00000620033 DNAH14Q0VDD8 3507 aa2.16□□□□□ -2.06
CHL1-216ENST00000620033 H3BS24 57 aa2.15□□□□□ -2.06
CHL1-216ENST00000620033 VCANP13611 3396 aa2.15□□□□□ -2.06
CHL1-216ENST00000620033 PRUNE2Q8WUY3 3088 aa2.15□□□□□ -2.06
CHL1-216ENST00000620033 KRTAP12-2P59991 146 aa2.15□□□□□ -2.07
CHL1-216ENST00000620033 DMBT1Q9UGM3 2413 aaPredicted RBP2.15□□□□□ -2.07
CHL1-216ENST00000620033 WDFY4Q6ZS81 3184 aa2.15□□□□□ -2.07
CHL1-216ENST00000620033 ITPR1Q14643 2758 aa2.15□□□□□ -2.07
CHL1-216ENST00000620033 IGSF10Q6WRI0 2623 aa2.14□□□□□ -2.07
CHL1-216ENST00000620033 REV3LO60673 3130 aa2.14□□□□□ -2.07
CHL1-216ENST00000620033 COL6A5A8TX70 2615 aa2.14□□□□□ -2.07
CHL1-216ENST00000620033 VPS13AQ96RL7 3174 aa2.14□□□□□ -2.07
CHL1-216ENST00000620033 TENM4Q6N022 2769 aa2.14□□□□□ -2.07
CHL1-216ENST00000620033 FRYQ5TBA9 3013 aa2.13□□□□□ -2.07
CHL1-216ENST00000620033 SPRR2EP22531 72 aa2.12□□□□□ -2.07
CHL1-216ENST00000620033 SPRR2BP35325 72 aa2.12□□□□□ -2.07
CHL1-216ENST00000620033 SPRR2AP35326 72 aa2.12□□□□□ -2.07
CHL1-216ENST00000620033 KRTAP10-12P60413 245 aa2.12□□□□□ -2.07
CHL1-216ENST00000620033 MT1HL1P0DM35 61 aa2.12□□□□□ -2.07
CHL1-216ENST00000620033 TNRC18O15417 2968 aaPredicted RBP2.12□□□□□ -2.07
CHL1-216ENST00000620033 NIPBLQ6KC79 2804 aaeCLIP2.11□□□□□ -2.07
CHL1-216ENST00000620033 HRNRQ86YZ3 2850 aaPredicted RBP2.11□□□□□ -2.07
CHL1-216ENST00000620033 MXRA5Q9NR99 2828 aa2.11□□□□□ -2.07
CHL1-216ENST00000620033 UBR5O95071 2799 aaPredicted RBP2.11□□□□□ -2.07
CHL1-216ENST00000620033 CENPEQ02224 2701 aa2.11□□□□□ -2.07
CHL1-216ENST00000620033 HUWE1Q7Z6Z7 4374 aaKnown RBP2.1□□□□□ -2.07
CHL1-216ENST00000620033 CHD6Q8TD26 2715 aa2.1□□□□□ -2.07
CHL1-216ENST00000620033 SPRR2FQ96RM1 72 aa2.1□□□□□ -2.07
CHL1-216ENST00000620033 USP34Q70CQ2 3546 aa2.09□□□□□ -2.07
CHL1-216ENST00000620033 FREM2Q5SZK8 3169 aa2.09□□□□□ -2.07
CHL1-216ENST00000620033 FRYLO94915 3013 aa2.09□□□□□ -2.08
CHL1-216ENST00000620033 ADGRG4Q8IZF6 3080 aa2.09□□□□□ -2.08
CHL1-216ENST00000620033 NBEAL1Q6ZS30 2694 aa2.08□□□□□ -2.08
CHL1-216ENST00000620033 EYSQ5T1H1 3165 aa2.08□□□□□ -2.08
CHL1-216ENST00000620033 MAP1AP78559 2803 aaPredicted RBP2.07□□□□□ -2.08
CHL1-216ENST00000620033 LCE2DQ5TA82 110 aaPredicted RBP2.07□□□□□ -2.08
CHL1-216ENST00000620033 STAB2Q8WWQ8 2551 aa2.07□□□□□ -2.08
CHL1-216ENST00000620033 ZZEF1O43149 2961 aa2.07□□□□□ -2.08
CHL1-216ENST00000620033 ATMQ13315 3056 aa2.07□□□□□ -2.08
CHL1-216ENST00000620033 SPRR2DP22532 72 aa2.07□□□□□ -2.08
CHL1-216ENST00000620033 KRTAP13-4Q3LI77 160 aa2.06□□□□□ -2.08
CHL1-216ENST00000620033 LRBAP50851 2863 aa2.06□□□□□ -2.08
CHL1-216ENST00000620033 KALRNO60229 2985 aa2.06□□□□□ -2.08
CHL1-216ENST00000620033 BOD1L1Q8NFC6 3051 aa2.06□□□□□ -2.08
CHL1-216ENST00000620033 CELSR3Q9NYQ7 3312 aa2.06□□□□□ -2.08
CHL1-216ENST00000620033 KRTAP10-7P60409 375 aaPredicted RBP2.06□□□□□ -2.08
CHL1-216ENST00000620033 ZANQ9Y493 2812 aa2.06□□□□□ -2.08
CHL1-216ENST00000620033 NOTCH1P46531 2555 aa2.06□□□□□ -2.08
CHL1-216ENST00000620033 COL6A3P12111 3177 aa2.05□□□□□ -2.08
CHL1-216ENST00000620033 HIVEP1P15822 2718 aa2.05□□□□□ -2.08
CHL1-216ENST00000620033 SPEGQ15772 3267 aa2.05□□□□□ -2.08
CHL1-216ENST00000620033 TENM2Q9NT68 2774 aa2.04□□□□□ -2.08
CHL1-216ENST00000620033 NSD1Q96L73 2696 aaPredicted RBP2.04□□□□□ -2.08
CHL1-216ENST00000620033 DMXL2Q8TDJ6 3036 aa2.04□□□□□ -2.08
CHL1-216ENST00000620033 NBEAL2Q6ZNJ1 2754 aa2.04□□□□□ -2.08
CHL1-216ENST00000620033 UTP20O75691 2785 aaKnown RBP2.03□□□□□ -2.08
CHL1-216ENST00000620033 TACC2O95359 2948 aa2.03□□□□□ -2.08
CHL1-216ENST00000620033 NDUFAF8A1L188 74 aa2.03□□□□□ -2.08
CHL1-216ENST00000620033 KRTAP10-4P60372 401 aaPredicted RBP2.03□□□□□ -2.08
CHL1-216ENST00000620033 PCLOQ9Y6V0 5065 aa2.03□□□□□ -2.08
CHL1-216ENST00000620033 DNAH1Q9P2D7 4330 aa2.03□□□□□ -2.09
CHL1-216ENST00000620033 SPRR5A0A1B0GTR4 108 aa2.02□□□□□ -2.09
CHL1-216ENST00000620033 ANK3Q12955 4377 aaKnown RBP2.02□□□□□ -2.09
CHL1-216ENST00000620033 NF1P21359 2839 aa2.01□□□□□ -2.09
CHL1-216ENST00000620033 MYO15AQ9UKN7 3530 aa2.01□□□□□ -2.09
CHL1-216ENST00000620033 COL12A1Q99715 3063 aa2.01□□□□□ -2.09
CHL1-216ENST00000620033 DMXL1Q9Y485 3027 aa2.01□□□□□ -2.09
CHL1-216ENST00000620033 APCP25054 2843 aa2.01□□□□□ -2.09
CHL1-216ENST00000620033 LOC400499M0QZD8 3231 aa2□□□□□ -2.09
CHL1-216ENST00000620033 VWFP04275 2813 aa2□□□□□ -2.09
CHL1-216ENST00000620033 MT1HP80294 61 aa1.99□□□□□ -2.09
CHL1-216ENST00000620033 DCHS2Q6V1P9 2916 aa1.98□□□□□ -2.09
CHL1-216ENST00000620033 KRTAP9-6A0A140TA67 174 aa1.97□□□□□ -2.09
CHL1-216ENST00000620033 BSNQ9UPA5 3926 aa1.97□□□□□ -2.09
CHL1-216ENST00000620033 FBN2P35556 2912 aa1.97□□□□□ -2.09
CHL1-216ENST00000620033 WDFY3Q8IZQ1 3526 aa1.96□□□□□ -2.1
CHL1-216ENST00000620033 LCE2BO14633 110 aa1.96□□□□□ -2.1
CHL1-216ENST00000620033 RYR2Q92736 4967 aa1.96□□□□□ -2.1
CHL1-216ENST00000620033 TENM1Q9UKZ4 2725 aa1.96□□□□□ -2.1
CHL1-216ENST00000620033 DMDP11532 3685 aa1.95□□□□□ -2.1
CHL1-216ENST00000620033 KRTAP10-5P60370 271 aa1.95□□□□□ -2.1
CHL1-216ENST00000620033 KRTAP12-3P60328 96 aa1.94□□□□□ -2.1
CHL1-216ENST00000620033 KRTAP9-2Q9BYQ4 174 aa1.94□□□□□ -2.1
CHL1-216ENST00000620033 CELSR2Q9HCU4 2923 aa1.93□□□□□ -2.1
CHL1-216ENST00000620033 TENM3Q9P273 2699 aa1.93□□□□□ -2.1
CHL1-216ENST00000620033 ASH1LQ9NR48 2969 aaKnown RBP1.93□□□□□ -2.1
CHL1-216ENST00000620033 DNAH3Q8TD57 4116 aa1.93□□□□□ -2.1
CHL1-216ENST00000620033 ZFHX4Q86UP3 3567 aa1.92□□□□□ -2.1
CHL1-216ENST00000620033 CFAP47Q6ZTR5 3102 aa1.92□□□□□ -2.1
CHL1-216ENST00000620033 KRTAP12-1P59990 96 aa1.92□□□□□ -2.1
CHL1-216ENST00000620033 PDZD2O15018 2839 aa1.91□□□□□ -2.1
CHL1-216ENST00000620033 KRTAP20-1Q3LI63 56 aa1.91□□□□□ -2.1
CHL1-216ENST00000620033 SMG1Q96Q15 3661 aaKnown RBP1.91□□□□□ -2.1
CHL1-216ENST00000620033 ASPMQ8IZT6 3477 aa1.9□□□□□ -2.1
CHL1-216ENST00000620033 RELNP78509 3460 aa1.9□□□□□ -2.11
CHL1-216ENST00000620033 LCE2CQ5TA81 110 aa1.9□□□□□ -2.11
CHL1-216ENST00000620033 LCE3AQ5TA76 89 aa1.9□□□□□ -2.11
CHL1-216ENST00000620033 AKAP9Q99996 3911 aa1.89□□□□□ -2.11
CHL1-216ENST00000620033 MUC3AQ02505 3323 aa1.89□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms