RNA–Protein interactions for RNA: ENST00000545377.5

ARHGEF28-214, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ARHGEF28, Length 6,351 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-214ENST00000545377 CELSR3Q9NYQ7 3312 aa9.03□□□□□ -0.96
ARHGEF28-214ENST00000545377 ITPR1Q14643 2758 aa9□□□□□ -0.97
ARHGEF28-214ENST00000545377 TENM4Q6N022 2769 aa8.98□□□□□ -0.97
ARHGEF28-214ENST00000545377 TACC2O95359 2948 aa8.97□□□□□ -0.97
ARHGEF28-214ENST00000545377 TRANK1O15050 2925 aa8.96□□□□□ -0.98
ARHGEF28-214ENST00000545377 APCP25054 2843 aa8.95□□□□□ -0.98
ARHGEF28-214ENST00000545377 KRTAP13-3Q3SY46 172 aa8.94□□□□□ -0.98
ARHGEF28-214ENST00000545377 UTP20O75691 2785 aaKnown RBP8.94□□□□□ -0.98
ARHGEF28-214ENST00000545377 HIVEP1P15822 2718 aa8.93□□□□□ -0.98
ARHGEF28-214ENST00000545377 P0C880 135 aa8.92□□□□□ -0.98
ARHGEF28-214ENST00000545377 DMXL2Q8TDJ6 3036 aa8.91□□□□□ -0.98
ARHGEF28-214ENST00000545377 VPS13AQ96RL7 3174 aa8.89□□□□□ -0.99
ARHGEF28-214ENST00000545377 KALRNO60229 2985 aa8.85□□□□□ -0.99
ARHGEF28-214ENST00000545377 H0YAA0 97 aa8.84□□□□□ -0.99
ARHGEF28-214ENST00000545377 CDH23Q9H251 3354 aa8.83□□□□□ -1
ARHGEF28-214ENST00000545377 ASH1LQ9NR48 2969 aaKnown RBP8.79□□□□□ -1
ARHGEF28-214ENST00000545377 COL12A1Q99715 3063 aa8.78□□□□□ -1
ARHGEF28-214ENST00000545377 ATMQ13315 3056 aa8.77□□□□□ -1.01
ARHGEF28-214ENST00000545377 LAMA1P25391 3075 aa8.76□□□□□ -1.01
ARHGEF28-214ENST00000545377 LRBAP50851 2863 aa8.76□□□□□ -1.01
ARHGEF28-214ENST00000545377 CFAP47Q6ZTR5 3102 aa8.76□□□□□ -1.01
ARHGEF28-214ENST00000545377 COL6A3P12111 3177 aa8.76□□□□□ -1.01
ARHGEF28-214ENST00000545377 FLNCQ14315 2725 aa8.75□□□□□ -1.01
ARHGEF28-214ENST00000545377 VCANP13611 3396 aa8.73□□□□□ -1.01
ARHGEF28-214ENST00000545377 FRYLO94915 3013 aa8.64□□□□□ -1.03
ARHGEF28-214ENST00000545377 TENM2Q9NT68 2774 aa8.6□□□□□ -1.03
ARHGEF28-214ENST00000545377 CELSR2Q9HCU4 2923 aa8.58□□□□□ -1.04
ARHGEF28-214ENST00000545377 SZT2Q5T011 3432 aa8.57□□□□□ -1.04
ARHGEF28-214ENST00000545377 TENM1Q9UKZ4 2725 aa8.56□□□□□ -1.04
ARHGEF28-214ENST00000545377 BOD1L1Q8NFC6 3051 aa8.56□□□□□ -1.04
ARHGEF28-214ENST00000545377 DNAH14Q0VDD8 3507 aa8.55□□□□□ -1.04
ARHGEF28-214ENST00000545377 EYSQ5T1H1 3165 aa8.54□□□□□ -1.04
ARHGEF28-214ENST00000545377 SPEGQ15772 3267 aa8.54□□□□□ -1.04
ARHGEF28-214ENST00000545377 ADGRG4Q8IZF6 3080 aa8.48□□□□□ -1.05
ARHGEF28-214ENST00000545377 DCHS2Q6V1P9 2916 aa8.48□□□□□ -1.05
ARHGEF28-214ENST00000545377 KRTAP12-2P59991 146 aa8.48□□□□□ -1.05
ARHGEF28-214ENST00000545377 ZZEF1O43149 2961 aa8.43□□□□□ -1.06
ARHGEF28-214ENST00000545377 NIPBLQ6KC79 2804 aaeCLIP8.42□□□□□ -1.06
ARHGEF28-214ENST00000545377 TENM3Q9P273 2699 aa8.39□□□□□ -1.07
ARHGEF28-214ENST00000545377 NBEAQ8NFP9 2946 aa8.39□□□□□ -1.07
ARHGEF28-214ENST00000545377 USP34Q70CQ2 3546 aa8.37□□□□□ -1.07
ARHGEF28-214ENST00000545377 KRTAP15-1Q3LI76 137 aa8.36□□□□□ -1.07
ARHGEF28-214ENST00000545377 KRTAP13-4Q3LI77 160 aa8.35□□□□□ -1.07
ARHGEF28-214ENST00000545377 NF1P21359 2839 aa8.3□□□□□ -1.08
ARHGEF28-214ENST00000545377 CRCT1Q9UGL9 99 aa8.3□□□□□ -1.08
ARHGEF28-214ENST00000545377 KRTAP12-1P59990 96 aa8.21□□□□□ -1.1
ARHGEF28-214ENST00000545377 TGP01266 2768 aa8.2□□□□□ -1.1
ARHGEF28-214ENST00000545377 CELSR1Q9NYQ6 3014 aa8.19□□□□□ -1.1
ARHGEF28-214ENST00000545377 PKD1L1Q8TDX9 2849 aa8.19□□□□□ -1.1
ARHGEF28-214ENST00000545377 TNRC18O15417 2968 aaPredicted RBP8.16□□□□□ -1.1
ARHGEF28-214ENST00000545377 SPTBN5Q9NRC6 3674 aaKnown RBP8.14□□□□□ -1.11
ARHGEF28-214ENST00000545377 ZANQ9Y493 2812 aa8.1□□□□□ -1.11
ARHGEF28-214ENST00000545377 VWFP04275 2813 aa8.09□□□□□ -1.11
ARHGEF28-214ENST00000545377 DMXL1Q9Y485 3027 aa8.07□□□□□ -1.12
ARHGEF28-214ENST00000545377 PDZD2O15018 2839 aa8.05□□□□□ -1.12
ARHGEF28-214ENST00000545377 FBN2P35556 2912 aa8.03□□□□□ -1.12
ARHGEF28-214ENST00000545377 KRTAP3-1Q9BYR8 98 aa8.03□□□□□ -1.12
ARHGEF28-214ENST00000545377 NBPF19A0A087WUL8 3843 aa7.99□□□□□ -1.13
ARHGEF28-214ENST00000545377 HRNRQ86YZ3 2850 aaPredicted RBP7.95□□□□□ -1.14
ARHGEF28-214ENST00000545377 KRTAP10-12P60413 245 aa7.9□□□□□ -1.14
ARHGEF28-214ENST00000545377 WDFY3Q8IZQ1 3526 aa7.89□□□□□ -1.15
ARHGEF28-214ENST00000545377 KRTAP4-5Q9BYR2 181 aa7.86□□□□□ -1.15
ARHGEF28-214ENST00000545377 ZFHX4Q86UP3 3567 aa7.86□□□□□ -1.15
ARHGEF28-214ENST00000545377 MYO15AQ9UKN7 3530 aa7.85□□□□□ -1.15
ARHGEF28-214ENST00000545377 MT1HL1P0DM35 61 aa7.85□□□□□ -1.15
ARHGEF28-214ENST00000545377 MXRA5Q9NR99 2828 aa7.82□□□□□ -1.16
ARHGEF28-214ENST00000545377 LOC400499M0QZD8 3231 aa7.81□□□□□ -1.16
ARHGEF28-214ENST00000545377 ASPMQ8IZT6 3477 aa7.79□□□□□ -1.16
ARHGEF28-214ENST00000545377 KRTAP10-6P60371 365 aaPredicted RBP7.77□□□□□ -1.17
ARHGEF28-214ENST00000545377 DCHS1Q96JQ0 3298 aa7.74□□□□□ -1.17
ARHGEF28-214ENST00000545377 RELNP78509 3460 aa7.73□□□□□ -1.17
ARHGEF28-214ENST00000545377 FBN3Q75N90 2809 aa7.64□□□□□ -1.19
ARHGEF28-214ENST00000545377 ZFHX3Q15911 3703 aa7.63□□□□□ -1.19
ARHGEF28-214ENST00000545377 SRRM2Q9UQ35 2752 aaKnown RBP7.63□□□□□ -1.19
ARHGEF28-214ENST00000545377 LORP23490 312 aaPredicted RBP7.61□□□□□ -1.19
ARHGEF28-214ENST00000545377 KRTAP12-3P60328 96 aa7.58□□□□□ -1.2
ARHGEF28-214ENST00000545377 KRTAP8-1Q8IUC2 63 aa7.54□□□□□ -1.2
ARHGEF28-214ENST00000545377 LCE3AQ5TA76 89 aa7.5□□□□□ -1.21
ARHGEF28-214ENST00000545377 ANK3Q12955 4377 aaKnown RBP7.47□□□□□ -1.21
ARHGEF28-214ENST00000545377 KRTAP3-3Q9BYR6 98 aa7.46□□□□□ -1.22
ARHGEF28-214ENST00000545377 INE1O15225 51 aa7.44□□□□□ -1.22
ARHGEF28-214ENST00000545377 KRTAP10-5P60370 271 aa7.43□□□□□ -1.22
ARHGEF28-214ENST00000545377 KRTAP3-2Q9BYR7 98 aa7.43□□□□□ -1.22
ARHGEF28-214ENST00000545377 MEGF8Q7Z7M0 2845 aa7.4□□□□□ -1.22
ARHGEF28-214ENST00000545377 FBN1P35555 2871 aaKnown RBP7.4□□□□□ -1.22
ARHGEF28-214ENST00000545377 KRTAP10-4P60372 401 aaPredicted RBP7.36□□□□□ -1.23
ARHGEF28-214ENST00000545377 CSMD1Q96PZ7 3565 aa7.36□□□□□ -1.23
ARHGEF28-214ENST00000545377 COL7A1Q02388 2944 aa7.35□□□□□ -1.23
ARHGEF28-214ENST00000545377 LAMA5O15230 3695 aa7.33□□□□□ -1.24
ARHGEF28-214ENST00000545377 OTOGQ6ZRI0 2925 aa7.32□□□□□ -1.24
ARHGEF28-214ENST00000545377 ALMS1Q8TCU4 4167 aa7.23□□□□□ -1.25
ARHGEF28-214ENST00000545377 HUWE1Q7Z6Z7 4374 aaKnown RBP7.23□□□□□ -1.25
ARHGEF28-214ENST00000545377 CSMD2Q7Z408 3487 aa7.2□□□□□ -1.26
ARHGEF28-214ENST00000545377 DMDP11532 3685 aa7.18□□□□□ -1.26
ARHGEF28-214ENST00000545377 SPENQ96T58 3664 aaKnown RBP7.15□□□□□ -1.27
ARHGEF28-214ENST00000545377 TRRAPQ9Y4A5 3859 aa7.14□□□□□ -1.27
ARHGEF28-214ENST00000545377 KRTAP23-1A1A580 65 aa7.06□□□□□ -1.28
ARHGEF28-214ENST00000545377 SPRR2FQ96RM1 72 aa7.06□□□□□ -1.28
ARHGEF28-214ENST00000545377 SMG1Q96Q15 3661 aaKnown RBP7.05□□□□□ -1.28
ARHGEF28-214ENST00000545377 MUC3AQ02505 3323 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 137 ms