RNA–Protein interactions for RNA: ENST00000530275.3

MACF1-230, Transcript of microtubule-actin crosslinking factor 1, humanhuman

Gene MACF1, Length 5,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-230ENST00000530275 APCP25054 2843 aa6.25□□□□□ -1.41
MACF1-230ENST00000530275 LAMA3Q16787 3333 aa6.24□□□□□ -1.41
MACF1-230ENST00000530275 WDFY4Q6ZS81 3184 aa6.23□□□□□ -1.41
MACF1-230ENST00000530275 DSPP15924 2871 aaKnown RBP6.22□□□□□ -1.41
MACF1-230ENST00000530275 ITPR1Q14643 2758 aa6.2□□□□□ -1.42
MACF1-230ENST00000530275 KRTAP15-1Q3LI76 137 aa6.2□□□□□ -1.42
MACF1-230ENST00000530275 LAMA1P25391 3075 aa6.19□□□□□ -1.42
MACF1-230ENST00000530275 PRUNE2Q8WUY3 3088 aa6.19□□□□□ -1.42
MACF1-230ENST00000530275 UTP20O75691 2785 aaKnown RBP6.16□□□□□ -1.42
MACF1-230ENST00000530275 KRTAP3-1Q9BYR8 98 aa6.13□□□□□ -1.43
MACF1-230ENST00000530275 KALRNO60229 2985 aa6.12□□□□□ -1.43
MACF1-230ENST00000530275 HIVEP1P15822 2718 aa6.11□□□□□ -1.43
MACF1-230ENST00000530275 CDH23Q9H251 3354 aa6.08□□□□□ -1.44
MACF1-230ENST00000530275 REV3LO60673 3130 aa6.07□□□□□ -1.44
MACF1-230ENST00000530275 LRBAP50851 2863 aa6.07□□□□□ -1.44
MACF1-230ENST00000530275 XIRP2A4UGR9 3374 aa6.04□□□□□ -1.44
MACF1-230ENST00000530275 CELSR3Q9NYQ7 3312 aa6.03□□□□□ -1.44
MACF1-230ENST00000530275 CRYBG3Q68DQ2 2970 aa6.03□□□□□ -1.44
MACF1-230ENST00000530275 SZT2Q5T011 3432 aa6.02□□□□□ -1.45
MACF1-230ENST00000530275 VPS13AQ96RL7 3174 aa6□□□□□ -1.45
MACF1-230ENST00000530275 COL6A3P12111 3177 aa6□□□□□ -1.45
MACF1-230ENST00000530275 ATMQ13315 3056 aa5.99□□□□□ -1.45
MACF1-230ENST00000530275 FREM2Q5SZK8 3169 aa5.98□□□□□ -1.45
MACF1-230ENST00000530275 KRTAP10-6P60371 365 aaPredicted RBP5.97□□□□□ -1.45
MACF1-230ENST00000530275 EYSQ5T1H1 3165 aa5.96□□□□□ -1.45
MACF1-230ENST00000530275 TACC2O95359 2948 aa5.96□□□□□ -1.46
MACF1-230ENST00000530275 TENM4Q6N022 2769 aa5.95□□□□□ -1.46
MACF1-230ENST00000530275 TNRC18O15417 2968 aaPredicted RBP5.95□□□□□ -1.46
MACF1-230ENST00000530275 COL12A1Q99715 3063 aa5.93□□□□□ -1.46
MACF1-230ENST00000530275 DNAH14Q0VDD8 3507 aa5.92□□□□□ -1.46
MACF1-230ENST00000530275 ASH1LQ9NR48 2969 aaKnown RBP5.91□□□□□ -1.46
MACF1-230ENST00000530275 NIPBLQ6KC79 2804 aaeCLIP5.9□□□□□ -1.462e-6■□□□□ 9.7
MACF1-230ENST00000530275 INE1O15225 51 aa5.9□□□□□ -1.47
MACF1-230ENST00000530275 MUC3AQ02505 3323 aa5.88□□□□□ -1.47
MACF1-230ENST00000530275 VCANP13611 3396 aa5.87□□□□□ -1.47
MACF1-230ENST00000530275 TGP01266 2768 aa5.87□□□□□ -1.47
MACF1-230ENST00000530275 DMXL2Q8TDJ6 3036 aa5.87□□□□□ -1.47
MACF1-230ENST00000530275 KRTAP10-12P60413 245 aa5.86□□□□□ -1.47
MACF1-230ENST00000530275 FLNCQ14315 2725 aa5.86□□□□□ -1.47
MACF1-230ENST00000530275 CRCT1Q9UGL9 99 aa5.85□□□□□ -1.47
MACF1-230ENST00000530275 ZZEF1O43149 2961 aa5.84□□□□□ -1.48
MACF1-230ENST00000530275 ADGRG4Q8IZF6 3080 aa5.84□□□□□ -1.48
MACF1-230ENST00000530275 TENM2Q9NT68 2774 aa5.84□□□□□ -1.48
MACF1-230ENST00000530275 FRYLO94915 3013 aa5.83□□□□□ -1.48
MACF1-230ENST00000530275 SPTBN5Q9NRC6 3674 aaKnown RBP5.81□□□□□ -1.48
MACF1-230ENST00000530275 CFAP47Q6ZTR5 3102 aa5.8□□□□□ -1.48
MACF1-230ENST00000530275 CELSR2Q9HCU4 2923 aa5.78□□□□□ -1.48
MACF1-230ENST00000530275 BOD1L1Q8NFC6 3051 aa5.78□□□□□ -1.48
MACF1-230ENST00000530275 USP34Q70CQ2 3546 aa5.78□□□□□ -1.48
MACF1-230ENST00000530275 HRNRQ86YZ3 2850 aaPredicted RBP5.76□□□□□ -1.49
MACF1-230ENST00000530275 DCHS2Q6V1P9 2916 aa5.76□□□□□ -1.49
MACF1-230ENST00000530275 MT1HL1P0DM35 61 aa5.76□□□□□ -1.49
MACF1-230ENST00000530275 KRTAP3-2Q9BYR7 98 aa5.73□□□□□ -1.49
MACF1-230ENST00000530275 KRTAP3-3Q9BYR6 98 aa5.72□□□□□ -1.49
MACF1-230ENST00000530275 TENM1Q9UKZ4 2725 aa5.71□□□□□ -1.49
MACF1-230ENST00000530275 SPEGQ15772 3267 aa5.71□□□□□ -1.5
MACF1-230ENST00000530275 NBEAQ8NFP9 2946 aa5.7□□□□□ -1.5
MACF1-230ENST00000530275 KRTAP12-3P60328 96 aa5.66□□□□□ -1.5
MACF1-230ENST00000530275 CELSR1Q9NYQ6 3014 aa5.62□□□□□ -1.51
MACF1-230ENST00000530275 MYO15AQ9UKN7 3530 aa5.62□□□□□ -1.51
MACF1-230ENST00000530275 LCE3AQ5TA76 89 aa5.61□□□□□ -1.51
MACF1-230ENST00000530275 NF1P21359 2839 aa5.6□□□□□ -1.51
MACF1-230ENST00000530275 KRTAP23-1A1A580 65 aa5.6□□□□□ -1.51
MACF1-230ENST00000530275 ANK3Q12955 4377 aaKnown RBP5.6□□□□□ -1.51
MACF1-230ENST00000530275 TENM3Q9P273 2699 aa5.59□□□□□ -1.51
MACF1-230ENST00000530275 ALMS1Q8TCU4 4167 aa5.58□□□□□ -1.52
MACF1-230ENST00000530275 ZANQ9Y493 2812 aa5.57□□□□□ -1.52
MACF1-230ENST00000530275 DMDP11532 3685 aa5.57□□□□□ -1.52
MACF1-230ENST00000530275 DMXL1Q9Y485 3027 aa5.53□□□□□ -1.52
MACF1-230ENST00000530275 KRTAP4-5Q9BYR2 181 aa5.53□□□□□ -1.52
MACF1-230ENST00000530275 KRTAP10-4P60372 401 aaPredicted RBP5.52□□□□□ -1.53
MACF1-230ENST00000530275 FBN2P35556 2912 aa5.51□□□□□ -1.53
MACF1-230ENST00000530275 LOC400499M0QZD8 3231 aa5.47□□□□□ -1.53
MACF1-230ENST00000530275 NBPF19A0A087WUL8 3843 aa5.44□□□□□ -1.54
MACF1-230ENST00000530275 HUWE1Q7Z6Z7 4374 aaKnown RBP5.44□□□□□ -1.54
MACF1-230ENST00000530275 DCHS1Q96JQ0 3298 aa5.43□□□□□ -1.54
MACF1-230ENST00000530275 WDFY3Q8IZQ1 3526 aa5.42□□□□□ -1.54
MACF1-230ENST00000530275 LORP23490 312 aaPredicted RBP5.41□□□□□ -1.54
MACF1-230ENST00000530275 KRTAP10-5P60370 271 aa5.41□□□□□ -1.54
MACF1-230ENST00000530275 KRTAP8-1Q8IUC2 63 aa5.41□□□□□ -1.54
MACF1-230ENST00000530275 MXRA5Q9NR99 2828 aa5.39□□□□□ -1.55
MACF1-230ENST00000530275 PDZD2O15018 2839 aa5.39□□□□□ -1.55
MACF1-230ENST00000530275 ASPMQ8IZT6 3477 aa5.36□□□□□ -1.55
MACF1-230ENST00000530275 LAMA5O15230 3695 aa5.31□□□□□ -1.56
MACF1-230ENST00000530275 ZFHX4Q86UP3 3567 aa5.31□□□□□ -1.56
MACF1-230ENST00000530275 VWFP04275 2813 aa5.29□□□□□ -1.56
MACF1-230ENST00000530275 PKD1L1Q8TDX9 2849 aa5.28□□□□□ -1.56
MACF1-230ENST00000530275 RELNP78509 3460 aa5.25□□□□□ -1.57
MACF1-230ENST00000530275 CSMD1Q96PZ7 3565 aa5.17□□□□□ -1.58
MACF1-230ENST00000530275 MEGF8Q7Z7M0 2845 aa5.15□□□□□ -1.58
MACF1-230ENST00000530275 DNAH2Q9P225 4427 aa5.15□□□□□ -1.59
MACF1-230ENST00000530275 MT1HP80294 61 aa5.14□□□□□ -1.59
MACF1-230ENST00000530275 OTOGQ6ZRI0 2925 aa5.13□□□□□ -1.59
MACF1-230ENST00000530275 FBN3Q75N90 2809 aa5.12□□□□□ -1.59
MACF1-230ENST00000530275 FBN1P35555 2871 aaKnown RBP5.12□□□□□ -1.59
MACF1-230ENST00000530275 SPENQ96T58 3664 aaKnown RBP5.12□□□□□ -1.59
MACF1-230ENST00000530275 SMG1Q96Q15 3661 aaKnown RBP5.09□□□□□ -1.59
MACF1-230ENST00000530275 KRTAP4-1Q9BYQ7 146 aa5.07□□□□□ -1.6
MACF1-230ENST00000530275 BSNQ9UPA5 3926 aa5.04□□□□□ -1.6
MACF1-230ENST00000530275 MT2AP02795 61 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms