RNA–Protein interactions for RNA: ENST00000530275.3

MACF1-230, Transcript of microtubule-actin crosslinking factor 1, humanhuman

Gene MACF1, Length 5,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-230ENST00000530275 DCAF8L2P0C7V8 631 aa22.15■■□□□ 1.14
MACF1-230ENST00000530275 SUPT5HO00267 1087 aaKnown RBP20.99■□□□□ 0.95
MACF1-230ENST00000530275 PELP1Q8IZL8 1130 aaKnown RBP20.74■□□□□ 0.91
MACF1-230ENST00000530275 EHMT2Q96KQ7 1210 aa20.55■□□□□ 0.88
MACF1-230ENST00000530275 SHROOM4Q9ULL8 1493 aa20.52■□□□□ 0.88
MACF1-230ENST00000530275 NISCHQ9Y2I1 1504 aa20.37■□□□□ 0.85
MACF1-230ENST00000530275 APLP2Q06481 763 aa20.35■□□□□ 0.85
MACF1-230ENST00000530275 FAM9AQ8IZU1 332 aaPredicted RBP20.1■□□□□ 0.81
MACF1-230ENST00000530275 ERICH6Q7L0X2 663 aa19.92■□□□□ 0.78
MACF1-230ENST00000530275 TTBK1Q5TCY1 1321 aaPredicted RBP19.9■□□□□ 0.78
MACF1-230ENST00000530275 CCER1Q8TC90 406 aaPredicted RBP19.81■□□□□ 0.76
MACF1-230ENST00000530275 CENPBP07199 599 aaPredicted RBP19.74■□□□□ 0.75
MACF1-230ENST00000530275 PCGF6Q9BYE7 350 aa19.73■□□□□ 0.75
MACF1-230ENST00000530275 RANGAP1P46060 587 aaPredicted RBP19.66■□□□□ 0.74
MACF1-230ENST00000530275 ZEB1P37275 1124 aaPredicted RBP19.62■□□□□ 0.73
MACF1-230ENST00000530275 ATP1B4Q9UN42 357 aaPredicted RBP19.58■□□□□ 0.73
MACF1-230ENST00000530275 TRIM41Q8WV44 630 aa19.46■□□□□ 0.71
MACF1-230ENST00000530275 NEFLP07196 543 aa19.44■□□□□ 0.7
MACF1-230ENST00000530275 UBTFP17480 764 aaKnown RBP19.34■□□□□ 0.69
MACF1-230ENST00000530275 YTHDC1Q96MU7 727 aaKnown RBP19.28■□□□□ 0.68
MACF1-230ENST00000530275 MYT1Q01538 1121 aa19.17■□□□□ 0.66
MACF1-230ENST00000530275 DAXXQ9UER7 740 aaPredicted RBP19.02■□□□□ 0.64
MACF1-230ENST00000530275 PPARGC1BQ86YN6 1023 aaKnown RBP18.95■□□□□ 0.62
MACF1-230ENST00000530275 MYT1LQ9UL68 1186 aa18.94■□□□□ 0.62
MACF1-230ENST00000530275 POLR3GLQ9BT43 218 aa18.9■□□□□ 0.62
MACF1-230ENST00000530275 TRIM26Q12899 539 aaPredicted RBP18.85■□□□□ 0.61
MACF1-230ENST00000530275 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.84■□□□□ 0.61
MACF1-230ENST00000530275 HNRNPUL2Q1KMD3 747 aaKnown RBP18.84■□□□□ 0.61
MACF1-230ENST00000530275 ITGAEP38570 1179 aa18.81■□□□□ 0.6
MACF1-230ENST00000530275 HRCP23327 699 aa18.64■□□□□ 0.57
MACF1-230ENST00000530275 CNGB1Q14028 1251 aaPredicted RBP18.64■□□□□ 0.57
MACF1-230ENST00000530275 SLC4A1APQ9BWU0 796 aaKnown RBP18.62■□□□□ 0.57
MACF1-230ENST00000530275 CHIC1Q5VXU3 224 aa18.59■□□□□ 0.57
MACF1-230ENST00000530275 ZNF316A6NFI3 1004 aaPredicted RBP18.58■□□□□ 0.57
MACF1-230ENST00000530275 CLSPNQ9HAW4 1339 aa18.51■□□□□ 0.55
MACF1-230ENST00000530275 RTL5Q5HYW3 569 aaPredicted RBP18.51■□□□□ 0.55
MACF1-230ENST00000530275 LOC105371045A0A1W2PR82 267 aa18.4■□□□□ 0.54
MACF1-230ENST00000530275 FAM50AQ14320 339 aaKnown RBP18.33■□□□□ 0.52
MACF1-230ENST00000530275 DIEXFQ68CQ4 756 aaKnown RBP18.31■□□□□ 0.52
MACF1-230ENST00000530275 TRIM52Q96A61 297 aa18.3■□□□□ 0.52
MACF1-230ENST00000530275 ZBTB47Q9UFB7 747 aaPredicted RBP18.2■□□□□ 0.5
MACF1-230ENST00000530275 NEUROD1Q13562 356 aa18.19■□□□□ 0.5
MACF1-230ENST00000530275 ANP32CO43423 234 aa18.11■□□□□ 0.49
MACF1-230ENST00000530275 BCANQ96GW7 911 aa18.11■□□□□ 0.49
MACF1-230ENST00000530275 ZNF326Q5BKZ1 582 aaKnown RBP18.1■□□□□ 0.49
MACF1-230ENST00000530275 CDK11AQ9UQ88 783 aaPredicted RBP18.09■□□□□ 0.49
MACF1-230ENST00000530275 CANXP27824 592 aaKnown RBP18.06■□□□□ 0.48
MACF1-230ENST00000530275 SLC24A1O60721 1099 aa18.02■□□□□ 0.48
MACF1-230ENST00000530275 NEFMP07197 916 aa17.97■□□□□ 0.47
MACF1-230ENST00000530275 BCL11AQ9H165 835 aa17.94■□□□□ 0.46
MACF1-230ENST00000530275 GTF3C3Q9Y5Q9 886 aa17.94■□□□□ 0.46
MACF1-230ENST00000530275 FBLN2P98095 1184 aa17.89■□□□□ 0.45
MACF1-230ENST00000530275 PABPN1Q86U42 306 aaKnown RBP eCLIP17.88■□□□□ 0.45
MACF1-230ENST00000530275 ANP32AP39687 249 aaKnown RBP17.83■□□□□ 0.44
MACF1-230ENST00000530275 ABCC9O60706 1549 aa17.77■□□□□ 0.43
MACF1-230ENST00000530275 NPM2Q86SE8 214 aaKnown RBP17.73■□□□□ 0.43
MACF1-230ENST00000530275 ARID3CA6NKF2 412 aa17.72■□□□□ 0.43
MACF1-230ENST00000530275 ZNF777Q9ULD5 760 aaPredicted RBP17.7■□□□□ 0.42
MACF1-230ENST00000530275 P3H3Q8IVL6 736 aa17.69■□□□□ 0.42
MACF1-230ENST00000530275 ANP32BQ92688 251 aaKnown RBP17.69■□□□□ 0.42
MACF1-230ENST00000530275 ESF1Q9H501 851 aaKnown RBP17.62■□□□□ 0.41
MACF1-230ENST00000530275 HSP90AA1P07900 732 aaKnown RBP17.62■□□□□ 0.41
MACF1-230ENST00000530275 ACIN1Q9UKV3 1341 aaKnown RBP17.61■□□□□ 0.41
MACF1-230ENST00000530275 UPF2Q9HAU5 1272 aaKnown RBP17.58■□□□□ 0.41
MACF1-230ENST00000530275 STAG3Q9UJ98 1225 aa17.56■□□□□ 0.4
MACF1-230ENST00000530275 CHGAP10645 457 aaKnown RBP17.54■□□□□ 0.4
MACF1-230ENST00000530275 TONSLQ96HA7 1378 aa17.54■□□□□ 0.4
MACF1-230ENST00000530275 FKBP8Q14318 412 aa17.52■□□□□ 0.4
MACF1-230ENST00000530275 CSRNP3Q8WYN3 585 aa17.52■□□□□ 0.39
MACF1-230ENST00000530275 EIF5BO60841 1220 aaKnown RBP17.47■□□□□ 0.39
MACF1-230ENST00000530275 HNRNPUQ00839 825 aaKnown RBP eCLIP17.45■□□□□ 0.38
MACF1-230ENST00000530275 FAM9BQ8IZU0 186 aa17.44■□□□□ 0.38
MACF1-230ENST00000530275 PLPPR3Q6T4P5 718 aa17.43■□□□□ 0.38
MACF1-230ENST00000530275 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.42■□□□□ 0.38
MACF1-230ENST00000530275 SALL2Q9Y467 1007 aaPredicted RBP17.37■□□□□ 0.37
MACF1-230ENST00000530275 WDR43Q15061 677 aaKnown RBP eCLIP17.37■□□□□ 0.376e-7■□□□□ 9.1
MACF1-230ENST00000530275 NPM1P06748 294 aaKnown RBP eCLIP17.36■□□□□ 0.37
MACF1-230ENST00000530275 GLIPR1L2Q4G1C9 344 aa17.36■□□□□ 0.37
MACF1-230ENST00000530275 DDX10Q13206 875 aaKnown RBP17.34■□□□□ 0.37
MACF1-230ENST00000530275 CCDC136Q96JN2 1154 aa17.34■□□□□ 0.37
MACF1-230ENST00000530275 TMC1Q8TDI8 760 aa17.34■□□□□ 0.37
MACF1-230ENST00000530275 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.32■□□□□ 0.361e-6■■□□□ 11.6
MACF1-230ENST00000530275 MYH16Q9H6N6 1097 aa17.28■□□□□ 0.36
MACF1-230ENST00000530275 NBR1Q14596 966 aa17.28■□□□□ 0.36
MACF1-230ENST00000530275 CHIC2Q9UKJ5 165 aa17.27■□□□□ 0.35
MACF1-230ENST00000530275 ARXQ96QS3 562 aa17.26■□□□□ 0.35
MACF1-230ENST00000530275 CDK11BP21127 795 aaKnown RBP17.25■□□□□ 0.35
MACF1-230ENST00000530275 SCAF1Q9H7N4 1312 aaKnown RBP17.25■□□□□ 0.35
MACF1-230ENST00000530275 MRS2Q9HD23 443 aa17.22■□□□□ 0.35
MACF1-230ENST00000530275 KDM2AQ9Y2K7 1162 aa17.21■□□□□ 0.35
MACF1-230ENST00000530275 SCRIBQ14160 1630 aa17.19■□□□□ 0.34
MACF1-230ENST00000530275 TSPY4P0CV99 314 aa17.17■□□□□ 0.34
MACF1-230ENST00000530275 TSPY10P0CW01 314 aa17.17■□□□□ 0.34
MACF1-230ENST00000530275 A0A0G2JS52 829 aa17.16■□□□□ 0.34
MACF1-230ENST00000530275 DCAF1Q9Y4B6 1507 aa17.16■□□□□ 0.34
MACF1-230ENST00000530275 ZBTB7CA1YPR0 619 aa17.15■□□□□ 0.34
MACF1-230ENST00000530275 NCLP19338 710 aaKnown RBP17.13■□□□□ 0.33
MACF1-230ENST00000530275 DDRGK1Q96HY6 314 aa17.13■□□□□ 0.33
MACF1-230ENST00000530275 BECN1Q14457 450 aa17.12■□□□□ 0.33
MACF1-230ENST00000530275 MTUS2Q5JR59 1369 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms