RNA–Protein interactions for RNA: ENST00000487932.5

PKD1-220, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 6,464 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-220ENST00000487932 VPS13AQ96RL7 3174 aa8.08□□□□□ -1.12
PKD1-220ENST00000487932 MAP1AP78559 2803 aaPredicted RBP8.07□□□□□ -1.12
PKD1-220ENST00000487932 NSD1Q96L73 2696 aaPredicted RBP8.06□□□□□ -1.12
PKD1-220ENST00000487932 COL6A3P12111 3177 aa8.04□□□□□ -1.12
PKD1-220ENST00000487932 TNRC18O15417 2968 aaPredicted RBP8.03□□□□□ -1.12
PKD1-220ENST00000487932 SPTBN5Q9NRC6 3674 aaKnown RBP8.02□□□□□ -1.13
PKD1-220ENST00000487932 LAMA1P25391 3075 aa8.01□□□□□ -1.13
PKD1-220ENST00000487932 FREM2Q5SZK8 3169 aa7.99□□□□□ -1.13
PKD1-220ENST00000487932 VCANP13611 3396 aa7.99□□□□□ -1.13
PKD1-220ENST00000487932 KRTAP1-4P0C5Y4 121 aa7.99□□□□□ -1.13
PKD1-220ENST00000487932 CRYBG3Q68DQ2 2970 aa7.98□□□□□ -1.13
PKD1-220ENST00000487932 TPRXLQ17RH7 258 aa7.98□□□□□ -1.13
PKD1-220ENST00000487932 REV3LO60673 3130 aa7.97□□□□□ -1.13
PKD1-220ENST00000487932 H0YAA0 97 aa7.95□□□□□ -1.14
PKD1-220ENST00000487932 FRYLO94915 3013 aa7.84□□□□□ -1.16
PKD1-220ENST00000487932 TENM4Q6N022 2769 aa7.82□□□□□ -1.16
PKD1-220ENST00000487932 KRTAP13-3Q3SY46 172 aa7.82□□□□□ -1.16
PKD1-220ENST00000487932 EYSQ5T1H1 3165 aa7.81□□□□□ -1.16
PKD1-220ENST00000487932 APCP25054 2843 aa7.81□□□□□ -1.16
PKD1-220ENST00000487932 ITPR1Q14643 2758 aa7.81□□□□□ -1.16
PKD1-220ENST00000487932 DMXL2Q8TDJ6 3036 aa7.81□□□□□ -1.16
PKD1-220ENST00000487932 BOD1L1Q8NFC6 3051 aa7.8□□□□□ -1.16
PKD1-220ENST00000487932 ATMQ13315 3056 aa7.79□□□□□ -1.16
PKD1-220ENST00000487932 USP34Q70CQ2 3546 aa7.79□□□□□ -1.16
PKD1-220ENST00000487932 LRBAP50851 2863 aa7.76□□□□□ -1.17
PKD1-220ENST00000487932 UTP20O75691 2785 aaKnown RBP7.76□□□□□ -1.17
PKD1-220ENST00000487932 HIVEP1P15822 2718 aa7.75□□□□□ -1.17
PKD1-220ENST00000487932 TACC2O95359 2948 aa7.75□□□□□ -1.17
PKD1-220ENST00000487932 COL12A1Q99715 3063 aa7.75□□□□□ -1.17
PKD1-220ENST00000487932 FLNCQ14315 2725 aa7.7□□□□□ -1.18
PKD1-220ENST00000487932 KALRNO60229 2985 aa7.68□□□□□ -1.18
PKD1-220ENST00000487932 DMXL1Q9Y485 3027 aa7.67□□□□□ -1.18
PKD1-220ENST00000487932 CFAP47Q6ZTR5 3102 aa7.65□□□□□ -1.18
PKD1-220ENST00000487932 SPEGQ15772 3267 aa7.65□□□□□ -1.19
PKD1-220ENST00000487932 KRTAP12-2P59991 146 aa7.65□□□□□ -1.19
PKD1-220ENST00000487932 ASH1LQ9NR48 2969 aaKnown RBP7.65□□□□□ -1.19
PKD1-220ENST00000487932 ADGRG4Q8IZF6 3080 aa7.65□□□□□ -1.19
PKD1-220ENST00000487932 NBEAQ8NFP9 2946 aa7.57□□□□□ -1.2
PKD1-220ENST00000487932 KRTAP15-1Q3LI76 137 aa7.51□□□□□ -1.21
PKD1-220ENST00000487932 MYO15AQ9UKN7 3530 aa7.5□□□□□ -1.21
PKD1-220ENST00000487932 TENM1Q9UKZ4 2725 aa7.5□□□□□ -1.21
PKD1-220ENST00000487932 CRCT1Q9UGL9 99 aa7.48□□□□□ -1.21
PKD1-220ENST00000487932 ZZEF1O43149 2961 aa7.47□□□□□ -1.21
PKD1-220ENST00000487932 CELSR2Q9HCU4 2923 aa7.46□□□□□ -1.22
PKD1-220ENST00000487932 KRTAP13-4Q3LI77 160 aa7.45□□□□□ -1.22
PKD1-220ENST00000487932 LOC400499M0QZD8 3231 aa7.44□□□□□ -1.22
PKD1-220ENST00000487932 TENM2Q9NT68 2774 aa7.42□□□□□ -1.22
PKD1-220ENST00000487932 TENM3Q9P273 2699 aa7.42□□□□□ -1.22
PKD1-220ENST00000487932 DCHS2Q6V1P9 2916 aa7.35□□□□□ -1.23
PKD1-220ENST00000487932 NIPBLQ6KC79 2804 aaeCLIP7.35□□□□□ -1.23
PKD1-220ENST00000487932 HRNRQ86YZ3 2850 aaPredicted RBP7.34□□□□□ -1.23
PKD1-220ENST00000487932 ASPMQ8IZT6 3477 aa7.33□□□□□ -1.24
PKD1-220ENST00000487932 KRTAP12-1P59990 96 aa7.33□□□□□ -1.24
PKD1-220ENST00000487932 NF1P21359 2839 aa7.29□□□□□ -1.24
PKD1-220ENST00000487932 ZANQ9Y493 2812 aa7.26□□□□□ -1.25
PKD1-220ENST00000487932 RELNP78509 3460 aa7.25□□□□□ -1.25
PKD1-220ENST00000487932 NBPF19A0A087WUL8 3843 aa7.24□□□□□ -1.25
PKD1-220ENST00000487932 WDFY3Q8IZQ1 3526 aa7.23□□□□□ -1.25
PKD1-220ENST00000487932 TGP01266 2768 aa7.18□□□□□ -1.26
PKD1-220ENST00000487932 LAMA5O15230 3695 aa7.16□□□□□ -1.26
PKD1-220ENST00000487932 PKD1L1Q8TDX9 2849 aa7.15□□□□□ -1.27
PKD1-220ENST00000487932 DMDP11532 3685 aa7.13□□□□□ -1.27
PKD1-220ENST00000487932 FBN2P35556 2912 aa7.12□□□□□ -1.27
PKD1-220ENST00000487932 PDZD2O15018 2839 aa7.11□□□□□ -1.27
PKD1-220ENST00000487932 KRTAP3-1Q9BYR8 98 aa7.1□□□□□ -1.27
PKD1-220ENST00000487932 ZFHX4Q86UP3 3567 aa7.07□□□□□ -1.28
PKD1-220ENST00000487932 VWFP04275 2813 aa7.06□□□□□ -1.28
PKD1-220ENST00000487932 CELSR1Q9NYQ6 3014 aa7.05□□□□□ -1.28
PKD1-220ENST00000487932 DCHS1Q96JQ0 3298 aa7.02□□□□□ -1.29
PKD1-220ENST00000487932 KRTAP10-12P60413 245 aa7.01□□□□□ -1.29
PKD1-220ENST00000487932 MXRA5Q9NR99 2828 aa6.93□□□□□ -1.3
PKD1-220ENST00000487932 MUC3AQ02505 3323 aa6.92□□□□□ -1.3
PKD1-220ENST00000487932 KRTAP10-6P60371 365 aaPredicted RBP6.88□□□□□ -1.31
PKD1-220ENST00000487932 ANK3Q12955 4377 aaKnown RBP6.87□□□□□ -1.31
PKD1-220ENST00000487932 CSMD1Q96PZ7 3565 aa6.86□□□□□ -1.31
PKD1-220ENST00000487932 ZFHX3Q15911 3703 aa6.85□□□□□ -1.31
PKD1-220ENST00000487932 SMG1Q96Q15 3661 aaKnown RBP6.81□□□□□ -1.32
PKD1-220ENST00000487932 INE1O15225 51 aa6.79□□□□□ -1.32
PKD1-220ENST00000487932 KRTAP4-5Q9BYR2 181 aa6.78□□□□□ -1.32
PKD1-220ENST00000487932 OTOGQ6ZRI0 2925 aa6.77□□□□□ -1.33
PKD1-220ENST00000487932 MT1HL1P0DM35 61 aa6.75□□□□□ -1.33
PKD1-220ENST00000487932 KRTAP12-3P60328 96 aa6.75□□□□□ -1.33
PKD1-220ENST00000487932 SRRM2Q9UQ35 2752 aaKnown RBP6.74□□□□□ -1.33
PKD1-220ENST00000487932 SPENQ96T58 3664 aaKnown RBP6.72□□□□□ -1.33
PKD1-220ENST00000487932 KRTAP10-5P60370 271 aa6.72□□□□□ -1.33
PKD1-220ENST00000487932 LORP23490 312 aaPredicted RBP6.7□□□□□ -1.34
PKD1-220ENST00000487932 FBN3Q75N90 2809 aa6.7□□□□□ -1.34
PKD1-220ENST00000487932 CSMD2Q7Z408 3487 aa6.7□□□□□ -1.34
PKD1-220ENST00000487932 LCE3AQ5TA76 89 aa6.69□□□□□ -1.34
PKD1-220ENST00000487932 BSNQ9UPA5 3926 aa6.69□□□□□ -1.34
PKD1-220ENST00000487932 FBN1P35555 2871 aaKnown RBP6.68□□□□□ -1.34
PKD1-220ENST00000487932 SVEP1Q4LDE5 3571 aa6.65□□□□□ -1.35
PKD1-220ENST00000487932 KRTAP8-1Q8IUC2 63 aa6.64□□□□□ -1.35
PKD1-220ENST00000487932 KRTAP3-3Q9BYR6 98 aa6.58□□□□□ -1.36
PKD1-220ENST00000487932 KRTAP3-2Q9BYR7 98 aa6.57□□□□□ -1.36
PKD1-220ENST00000487932 TRRAPQ9Y4A5 3859 aa6.54□□□□□ -1.36
PKD1-220ENST00000487932 CUBNO60494 3623 aa6.5□□□□□ -1.37
PKD1-220ENST00000487932 HUWE1Q7Z6Z7 4374 aaKnown RBP6.47□□□□□ -1.37
PKD1-220ENST00000487932 MEGF8Q7Z7M0 2845 aa6.45□□□□□ -1.38
PKD1-220ENST00000487932 COL7A1Q02388 2944 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms