RNA–Protein interactions for RNA: ENST00000465301.2

RTL9-201, Transcript of retrotransposon Gag like 9, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RTL9, Length 5,426 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9-201ENST00000465301 MGAQ8IWI9 3026 aa4.27□□□□□ -1.73
RTL9-201ENST00000465301 UNC80Q8N2C7 3258 aa4.26□□□□□ -1.73
RTL9-201ENST00000465301 FRYQ5TBA9 3013 aa4.26□□□□□ -1.73
RTL9-201ENST00000465301 EYSQ5T1H1 3165 aa4.25□□□□□ -1.73
RTL9-201ENST00000465301 KRTAP13-3Q3SY46 172 aa4.24□□□□□ -1.73
RTL9-201ENST00000465301 H0YAA0 97 aa4.22□□□□□ -1.73
RTL9-201ENST00000465301 CRYBG3Q68DQ2 2970 aa4.22□□□□□ -1.73
RTL9-201ENST00000465301 PRUNE2Q8WUY3 3088 aa4.22□□□□□ -1.73
RTL9-201ENST00000465301 USP34Q70CQ2 3546 aa4.2□□□□□ -1.74
RTL9-201ENST00000465301 COL6A3P12111 3177 aa4.19□□□□□ -1.74
RTL9-201ENST00000465301 ITPR1Q14643 2758 aa4.18□□□□□ -1.74
RTL9-201ENST00000465301 DNAH14Q0VDD8 3507 aa4.18□□□□□ -1.74
RTL9-201ENST00000465301 TRIOO75962 3097 aa4.12□□□□□ -1.75
RTL9-201ENST00000465301 WDFY4Q6ZS81 3184 aa4.11□□□□□ -1.75
RTL9-201ENST00000465301 DMDP11532 3685 aa4.11□□□□□ -1.75
RTL9-201ENST00000465301 TACC2O95359 2948 aa4.11□□□□□ -1.75
RTL9-201ENST00000465301 MYO15AQ9UKN7 3530 aa4.1□□□□□ -1.75
RTL9-201ENST00000465301 TENM2Q9NT68 2774 aa4.1□□□□□ -1.75
RTL9-201ENST00000465301 KRTAP13-4Q3LI77 160 aa4.1□□□□□ -1.75
RTL9-201ENST00000465301 LAMA1P25391 3075 aa4.09□□□□□ -1.76
RTL9-201ENST00000465301 TENM3Q9P273 2699 aa4.08□□□□□ -1.76
RTL9-201ENST00000465301 VCANP13611 3396 aa4.06□□□□□ -1.76
RTL9-201ENST00000465301 KRTAP12-2P59991 146 aa4.06□□□□□ -1.76
RTL9-201ENST00000465301 NBEAL2Q6ZNJ1 2754 aa4.05□□□□□ -1.76
RTL9-201ENST00000465301 WDFY3Q8IZQ1 3526 aa4.04□□□□□ -1.76
RTL9-201ENST00000465301 TENM1Q9UKZ4 2725 aa4.03□□□□□ -1.76
RTL9-201ENST00000465301 CFAP54Q96N23 3096 aa4.01□□□□□ -1.77
RTL9-201ENST00000465301 VPS13AQ96RL7 3174 aa4.01□□□□□ -1.77
RTL9-201ENST00000465301 KRTAP15-1Q3LI76 137 aa4.01□□□□□ -1.77
RTL9-201ENST00000465301 COL12A1Q99715 3063 aa4□□□□□ -1.77
RTL9-201ENST00000465301 APCP25054 2843 aa3.99□□□□□ -1.77
RTL9-201ENST00000465301 FRYLO94915 3013 aa3.99□□□□□ -1.77
RTL9-201ENST00000465301 MUC3AQ02505 3323 aa3.98□□□□□ -1.77
RTL9-201ENST00000465301 ASH1LQ9NR48 2969 aaKnown RBP3.98□□□□□ -1.77
RTL9-201ENST00000465301 NBEAQ8NFP9 2946 aa3.97□□□□□ -1.77
RTL9-201ENST00000465301 NIPBLQ6KC79 2804 aaeCLIP3.96□□□□□ -1.77
RTL9-201ENST00000465301 DMXL1Q9Y485 3027 aa3.96□□□□□ -1.78
RTL9-201ENST00000465301 FREM2Q5SZK8 3169 aa3.95□□□□□ -1.78
RTL9-201ENST00000465301 SPEGQ15772 3267 aa3.95□□□□□ -1.78
RTL9-201ENST00000465301 BSNQ9UPA5 3926 aa3.94□□□□□ -1.78
RTL9-201ENST00000465301 PKD1L1Q8TDX9 2849 aa3.93□□□□□ -1.78
RTL9-201ENST00000465301 KRTAP12-1P59990 96 aa3.93□□□□□ -1.78
RTL9-201ENST00000465301 ATMQ13315 3056 aa3.92□□□□□ -1.78
RTL9-201ENST00000465301 ZFHX4Q86UP3 3567 aa3.91□□□□□ -1.78
RTL9-201ENST00000465301 DMXL2Q8TDJ6 3036 aa3.89□□□□□ -1.79
RTL9-201ENST00000465301 INE1O15225 51 aa3.88□□□□□ -1.79
RTL9-201ENST00000465301 LRBAP50851 2863 aa3.88□□□□□ -1.79
RTL9-201ENST00000465301 NF1P21359 2839 aa3.88□□□□□ -1.79
RTL9-201ENST00000465301 ASPMQ8IZT6 3477 aa3.87□□□□□ -1.79
RTL9-201ENST00000465301 CELSR2Q9HCU4 2923 aa3.86□□□□□ -1.79
RTL9-201ENST00000465301 KALRNO60229 2985 aa3.86□□□□□ -1.79
RTL9-201ENST00000465301 SPENQ96T58 3664 aaKnown RBP3.86□□□□□ -1.79
RTL9-201ENST00000465301 CELSR3Q9NYQ7 3312 aa3.85□□□□□ -1.79
RTL9-201ENST00000465301 LAMA5O15230 3695 aa3.84□□□□□ -1.79
RTL9-201ENST00000465301 FBN3Q75N90 2809 aa3.84□□□□□ -1.8
RTL9-201ENST00000465301 DCHS2Q6V1P9 2916 aa3.84□□□□□ -1.8
RTL9-201ENST00000465301 DCHS1Q96JQ0 3298 aa3.82□□□□□ -1.8
RTL9-201ENST00000465301 ZZEF1O43149 2961 aa3.81□□□□□ -1.8
RTL9-201ENST00000465301 LOC400499M0QZD8 3231 aa3.81□□□□□ -1.8
RTL9-201ENST00000465301 BOD1L1Q8NFC6 3051 aa3.8□□□□□ -1.8
RTL9-201ENST00000465301 KRTAP10-12P60413 245 aa3.78□□□□□ -1.8
RTL9-201ENST00000465301 MXRA5Q9NR99 2828 aa3.78□□□□□ -1.8
RTL9-201ENST00000465301 VWFP04275 2813 aa3.78□□□□□ -1.81
RTL9-201ENST00000465301 CFAP47Q6ZTR5 3102 aa3.77□□□□□ -1.81
RTL9-201ENST00000465301 SRRM2Q9UQ35 2752 aaKnown RBP3.75□□□□□ -1.81
RTL9-201ENST00000465301 KRTAP3-1Q9BYR8 98 aa3.75□□□□□ -1.81
RTL9-201ENST00000465301 CRCT1Q9UGL9 99 aa3.72□□□□□ -1.81
RTL9-201ENST00000465301 FBN2P35556 2912 aa3.71□□□□□ -1.82
RTL9-201ENST00000465301 ADGRG4Q8IZF6 3080 aa3.7□□□□□ -1.82
RTL9-201ENST00000465301 HRNRQ86YZ3 2850 aaPredicted RBP3.7□□□□□ -1.82
RTL9-201ENST00000465301 PDZD2O15018 2839 aa3.7□□□□□ -1.82
RTL9-201ENST00000465301 ANK3Q12955 4377 aaKnown RBP3.7□□□□□ -1.82
RTL9-201ENST00000465301 RELNP78509 3460 aa3.69□□□□□ -1.82
RTL9-201ENST00000465301 KRTAP10-6P60371 365 aaPredicted RBP3.69□□□□□ -1.82
RTL9-201ENST00000465301 KRTAP23-1A1A580 65 aa3.69□□□□□ -1.82
RTL9-201ENST00000465301 ZANQ9Y493 2812 aa3.68□□□□□ -1.82
RTL9-201ENST00000465301 SMG1Q96Q15 3661 aaKnown RBP3.68□□□□□ -1.82
RTL9-201ENST00000465301 CELSR1Q9NYQ6 3014 aa3.67□□□□□ -1.82
RTL9-201ENST00000465301 AKAP9Q99996 3911 aa3.66□□□□□ -1.82
RTL9-201ENST00000465301 NBPF19A0A087WUL8 3843 aa3.66□□□□□ -1.82
RTL9-201ENST00000465301 TGP01266 2768 aa3.66□□□□□ -1.82
RTL9-201ENST00000465301 KRTAP12-3P60328 96 aa3.64□□□□□ -1.83
RTL9-201ENST00000465301 MT1HL1P0DM35 61 aa3.6□□□□□ -1.83
RTL9-201ENST00000465301 VPS13CQ709C8 3753 aa3.58□□□□□ -1.84
RTL9-201ENST00000465301 KRTAP4-5Q9BYR2 181 aa3.55□□□□□ -1.84
RTL9-201ENST00000465301 KRTAP8-1Q8IUC2 63 aa3.54□□□□□ -1.84
RTL9-201ENST00000465301 CSMD2Q7Z408 3487 aa3.53□□□□□ -1.84
RTL9-201ENST00000465301 CSMD1Q96PZ7 3565 aa3.52□□□□□ -1.85
RTL9-201ENST00000465301 ZFHX3Q15911 3703 aa3.52□□□□□ -1.85
RTL9-201ENST00000465301 KRTAP3-2Q9BYR7 98 aa3.52□□□□□ -1.85
RTL9-201ENST00000465301 FBN1P35555 2871 aaKnown RBP3.52□□□□□ -1.85
RTL9-201ENST00000465301 LCE3AQ5TA76 89 aa3.51□□□□□ -1.85
RTL9-201ENST00000465301 OTOGQ6ZRI0 2925 aa3.5□□□□□ -1.85
RTL9-201ENST00000465301 ZNF469Q96JG9 3925 aaPredicted RBP3.5□□□□□ -1.85
RTL9-201ENST00000465301 KRTAP3-3Q9BYR6 98 aa3.49□□□□□ -1.85
RTL9-201ENST00000465301 KRTAP10-5P60370 271 aa3.49□□□□□ -1.85
RTL9-201ENST00000465301 SVEP1Q4LDE5 3571 aa3.49□□□□□ -1.85
RTL9-201ENST00000465301 CMYA5Q8N3K9 4069 aa3.44□□□□□ -1.86
RTL9-201ENST00000465301 CUBNO60494 3623 aa3.44□□□□□ -1.86
RTL9-201ENST00000465301 LORP23490 312 aaPredicted RBP3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 145.1 ms