RNA–Protein interactions for RNA: ENST00000426501.5

HERC2P3-204, Transcript of hect domain and RLD 2 pseudogene 3, humanhuman

TSL 1 (best) BASIC

Gene HERC2P3, Length 5,995 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2P3-204ENST00000426501 TRANK1O15050 2925 aa5.75□□□□□ -1.49
HERC2P3-204ENST00000426501 HIVEP1P15822 2718 aa5.74□□□□□ -1.49
HERC2P3-204ENST00000426501 KRTAP15-1Q3LI76 137 aa5.7□□□□□ -1.5
HERC2P3-204ENST00000426501 LAMA1P25391 3075 aa5.69□□□□□ -1.5
HERC2P3-204ENST00000426501 WDFY4Q6ZS81 3184 aa5.68□□□□□ -1.5
HERC2P3-204ENST00000426501 KRTAP12-1P59990 96 aa5.68□□□□□ -1.5
HERC2P3-204ENST00000426501 UNC80Q8N2C7 3258 aa5.67□□□□□ -1.5
HERC2P3-204ENST00000426501 DNAH14Q0VDD8 3507 aa5.67□□□□□ -1.5
HERC2P3-204ENST00000426501 XIRP2A4UGR9 3374 aa5.66□□□□□ -1.5
HERC2P3-204ENST00000426501 CRYBG3Q68DQ2 2970 aa5.65□□□□□ -1.51
HERC2P3-204ENST00000426501 NIPBLQ6KC79 2804 aaeCLIP5.64□□□□□ -1.512e-6■■■□□ 17.1
HERC2P3-204ENST00000426501 PRUNE2Q8WUY3 3088 aa5.64□□□□□ -1.51
HERC2P3-204ENST00000426501 TACC2O95359 2948 aa5.61□□□□□ -1.51
HERC2P3-204ENST00000426501 RANBP2P49792 3224 aaKnown RBP5.6□□□□□ -1.51
HERC2P3-204ENST00000426501 TRIOO75962 3097 aa5.59□□□□□ -1.51
HERC2P3-204ENST00000426501 LRBAP50851 2863 aa5.59□□□□□ -1.51
HERC2P3-204ENST00000426501 REV3LO60673 3130 aa5.59□□□□□ -1.52
HERC2P3-204ENST00000426501 CDH23Q9H251 3354 aa5.57□□□□□ -1.52
HERC2P3-204ENST00000426501 FLNCQ14315 2725 aa5.56□□□□□ -1.52
HERC2P3-204ENST00000426501 KALRNO60229 2985 aa5.56□□□□□ -1.52
HERC2P3-204ENST00000426501 ASH1LQ9NR48 2969 aaKnown RBP5.54□□□□□ -1.52
HERC2P3-204ENST00000426501 TENM1Q9UKZ4 2725 aa5.53□□□□□ -1.52
HERC2P3-204ENST00000426501 TENM3Q9P273 2699 aa5.52□□□□□ -1.53
HERC2P3-204ENST00000426501 DMXL2Q8TDJ6 3036 aa5.51□□□□□ -1.53
HERC2P3-204ENST00000426501 VCANP13611 3396 aa5.51□□□□□ -1.53
HERC2P3-204ENST00000426501 KRTAP3-1Q9BYR8 98 aa5.51□□□□□ -1.53
HERC2P3-204ENST00000426501 NBEAQ8NFP9 2946 aa5.5□□□□□ -1.53
HERC2P3-204ENST00000426501 TENM2Q9NT68 2774 aa5.5□□□□□ -1.53
HERC2P3-204ENST00000426501 TGP01266 2768 aa5.49□□□□□ -1.53
HERC2P3-204ENST00000426501 ATMQ13315 3056 aa5.48□□□□□ -1.53
HERC2P3-204ENST00000426501 CELSR2Q9HCU4 2923 aa5.47□□□□□ -1.53
HERC2P3-204ENST00000426501 COL12A1Q99715 3063 aa5.47□□□□□ -1.53
HERC2P3-204ENST00000426501 VPS13AQ96RL7 3174 aa5.44□□□□□ -1.54
HERC2P3-204ENST00000426501 SPEGQ15772 3267 aa5.44□□□□□ -1.54
HERC2P3-204ENST00000426501 INE1O15225 51 aa5.43□□□□□ -1.54
HERC2P3-204ENST00000426501 DCHS2Q6V1P9 2916 aa5.43□□□□□ -1.54
HERC2P3-204ENST00000426501 FREM2Q5SZK8 3169 aa5.42□□□□□ -1.54
HERC2P3-204ENST00000426501 CELSR3Q9NYQ7 3312 aa5.41□□□□□ -1.54
HERC2P3-204ENST00000426501 SZT2Q5T011 3432 aa5.41□□□□□ -1.54
HERC2P3-204ENST00000426501 KRTAP10-6P60371 365 aaPredicted RBP5.39□□□□□ -1.55
HERC2P3-204ENST00000426501 KRTAP10-12P60413 245 aa5.38□□□□□ -1.55
HERC2P3-204ENST00000426501 FRYLO94915 3013 aa5.38□□□□□ -1.55
HERC2P3-204ENST00000426501 CRCT1Q9UGL9 99 aa5.37□□□□□ -1.55
HERC2P3-204ENST00000426501 USP34Q70CQ2 3546 aa5.35□□□□□ -1.55
HERC2P3-204ENST00000426501 NF1P21359 2839 aa5.34□□□□□ -1.55
HERC2P3-204ENST00000426501 MYO15AQ9UKN7 3530 aa5.32□□□□□ -1.56
HERC2P3-204ENST00000426501 EYSQ5T1H1 3165 aa5.3□□□□□ -1.56
HERC2P3-204ENST00000426501 ZZEF1O43149 2961 aa5.29□□□□□ -1.56
HERC2P3-204ENST00000426501 ADGRG4Q8IZF6 3080 aa5.28□□□□□ -1.56
HERC2P3-204ENST00000426501 SPTBN5Q9NRC6 3674 aaKnown RBP5.26□□□□□ -1.57
HERC2P3-204ENST00000426501 MT1HL1P0DM35 61 aa5.25□□□□□ -1.57
HERC2P3-204ENST00000426501 PDZD2O15018 2839 aa5.25□□□□□ -1.57
HERC2P3-204ENST00000426501 BOD1L1Q8NFC6 3051 aa5.23□□□□□ -1.57
HERC2P3-204ENST00000426501 KRTAP12-3P60328 96 aa5.2□□□□□ -1.58
HERC2P3-204ENST00000426501 CELSR1Q9NYQ6 3014 aa5.19□□□□□ -1.58
HERC2P3-204ENST00000426501 CFAP47Q6ZTR5 3102 aa5.18□□□□□ -1.58
HERC2P3-204ENST00000426501 ZANQ9Y493 2812 aa5.18□□□□□ -1.58
HERC2P3-204ENST00000426501 COL6A3P12111 3177 aa5.17□□□□□ -1.58
HERC2P3-204ENST00000426501 KRTAP23-1A1A580 65 aa5.16□□□□□ -1.58
HERC2P3-204ENST00000426501 KRTAP3-2Q9BYR7 98 aa5.15□□□□□ -1.58
HERC2P3-204ENST00000426501 PKD1L1Q8TDX9 2849 aa5.13□□□□□ -1.59
HERC2P3-204ENST00000426501 KRTAP3-3Q9BYR6 98 aa5.13□□□□□ -1.59
HERC2P3-204ENST00000426501 TNRC18O15417 2968 aaPredicted RBP5.13□□□□□ -1.59
HERC2P3-204ENST00000426501 HRNRQ86YZ3 2850 aaPredicted RBP5.12□□□□□ -1.59
HERC2P3-204ENST00000426501 WDFY3Q8IZQ1 3526 aa5.12□□□□□ -1.59
HERC2P3-204ENST00000426501 FBN2P35556 2912 aa5.08□□□□□ -1.6
HERC2P3-204ENST00000426501 VWFP04275 2813 aa5.08□□□□□ -1.6
HERC2P3-204ENST00000426501 MXRA5Q9NR99 2828 aa5.07□□□□□ -1.6
HERC2P3-204ENST00000426501 LCE3AQ5TA76 89 aa5.07□□□□□ -1.6
HERC2P3-204ENST00000426501 LOC400499M0QZD8 3231 aa5.07□□□□□ -1.6
HERC2P3-204ENST00000426501 DCHS1Q96JQ0 3298 aa5.02□□□□□ -1.61
HERC2P3-204ENST00000426501 KRTAP8-1Q8IUC2 63 aa5.02□□□□□ -1.61
HERC2P3-204ENST00000426501 KRTAP4-5Q9BYR2 181 aa5□□□□□ -1.61
HERC2P3-204ENST00000426501 KRTAP10-5P60370 271 aa4.99□□□□□ -1.61
HERC2P3-204ENST00000426501 ZFHX4Q86UP3 3567 aa4.99□□□□□ -1.61
HERC2P3-204ENST00000426501 KRTAP10-4P60372 401 aaPredicted RBP4.97□□□□□ -1.61
HERC2P3-204ENST00000426501 FBN3Q75N90 2809 aa4.97□□□□□ -1.61
HERC2P3-204ENST00000426501 SMG1Q96Q15 3661 aaKnown RBP4.92□□□□□ -1.62
HERC2P3-204ENST00000426501 ASPMQ8IZT6 3477 aa4.92□□□□□ -1.62
HERC2P3-204ENST00000426501 DMXL1Q9Y485 3027 aa4.91□□□□□ -1.62
HERC2P3-204ENST00000426501 CSMD1Q96PZ7 3565 aa4.9□□□□□ -1.62
HERC2P3-204ENST00000426501 DMDP11532 3685 aa4.9□□□□□ -1.63
HERC2P3-204ENST00000426501 LORP23490 312 aaPredicted RBP4.84□□□□□ -1.64
HERC2P3-204ENST00000426501 MEGF8Q7Z7M0 2845 aa4.83□□□□□ -1.64
HERC2P3-204ENST00000426501 SRRM2Q9UQ35 2752 aaKnown RBP4.8□□□□□ -1.64
HERC2P3-204ENST00000426501 LAMA5O15230 3695 aa4.8□□□□□ -1.64
HERC2P3-204ENST00000426501 SPENQ96T58 3664 aaKnown RBP4.78□□□□□ -1.64
HERC2P3-204ENST00000426501 RELNP78509 3460 aa4.77□□□□□ -1.65
HERC2P3-204ENST00000426501 MUC3AQ02505 3323 aa4.76□□□□□ -1.65
HERC2P3-204ENST00000426501 SVEP1Q4LDE5 3571 aa4.75□□□□□ -1.65
HERC2P3-204ENST00000426501 ALMS1Q8TCU4 4167 aa4.74□□□□□ -1.65
HERC2P3-204ENST00000426501 HUWE1Q7Z6Z7 4374 aaKnown RBP4.73□□□□□ -1.65
HERC2P3-204ENST00000426501 ANK3Q12955 4377 aaKnown RBP4.7□□□□□ -1.66
HERC2P3-204ENST00000426501 KRTAP10-7P60409 375 aaPredicted RBP4.69□□□□□ -1.66
HERC2P3-204ENST00000426501 COL7A1Q02388 2944 aa4.69□□□□□ -1.66
HERC2P3-204ENST00000426501 NBPF19A0A087WUL8 3843 aa4.69□□□□□ -1.66
HERC2P3-204ENST00000426501 MT1HP80294 61 aa4.66□□□□□ -1.66
HERC2P3-204ENST00000426501 OTOGQ6ZRI0 2925 aa4.65□□□□□ -1.66
HERC2P3-204ENST00000426501 FBN1P35555 2871 aaKnown RBP4.63□□□□□ -1.67
HERC2P3-204ENST00000426501 SPRR2FQ96RM1 72 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms