RNA–Protein interactions for RNA: ENST00000399788.6

KDM5A-201, Transcript of lysine demethylase 5A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KDM5A, Length 10,763 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5A-201ENST00000399788 TPRXLQ17RH7 258 aa4.43□□□□□ -1.7
KDM5A-201ENST00000399788 TENM1Q9UKZ4 2725 aa4.43□□□□□ -1.7
KDM5A-201ENST00000399788 TACC2O95359 2948 aa4.41□□□□□ -1.7
KDM5A-201ENST00000399788 ASH1LQ9NR48 2969 aaKnown RBP4.41□□□□□ -1.7
KDM5A-201ENST00000399788 XIRP2A4UGR9 3374 aa4.41□□□□□ -1.7
KDM5A-201ENST00000399788 RANBP2P49792 3224 aaKnown RBP4.41□□□□□ -1.7
KDM5A-201ENST00000399788 VPS13AQ96RL7 3174 aa4.4□□□□□ -1.71
KDM5A-201ENST00000399788 LAMA3Q16787 3333 aa4.38□□□□□ -1.71
KDM5A-201ENST00000399788 CELSR3Q9NYQ7 3312 aa4.38□□□□□ -1.71
KDM5A-201ENST00000399788 A6NN06 94 aa4.38□□□□□ -1.71
KDM5A-201ENST00000399788 KALRNO60229 2985 aa4.37□□□□□ -1.71
KDM5A-201ENST00000399788 UNC80Q8N2C7 3258 aa4.37□□□□□ -1.71
KDM5A-201ENST00000399788 LAMA1P25391 3075 aa4.35□□□□□ -1.71
KDM5A-201ENST00000399788 TENM3Q9P273 2699 aa4.35□□□□□ -1.71
KDM5A-201ENST00000399788 FRYLO94915 3013 aa4.34□□□□□ -1.72
KDM5A-201ENST00000399788 LRBAP50851 2863 aa4.33□□□□□ -1.72
KDM5A-201ENST00000399788 CELSR2Q9HCU4 2923 aa4.32□□□□□ -1.72
KDM5A-201ENST00000399788 NF1P21359 2839 aa4.31□□□□□ -1.72
KDM5A-201ENST00000399788 COL12A1Q99715 3063 aa4.31□□□□□ -1.72
KDM5A-201ENST00000399788 KRTAP1-4P0C5Y4 121 aa4.3□□□□□ -1.72
KDM5A-201ENST00000399788 VCANP13611 3396 aa4.28□□□□□ -1.72
KDM5A-201ENST00000399788 KRTAP13-3Q3SY46 172 aa4.26□□□□□ -1.73
KDM5A-201ENST00000399788 HTTP42858 3142 aa4.26□□□□□ -1.73
KDM5A-201ENST00000399788 CFAP47Q6ZTR5 3102 aa4.25□□□□□ -1.73
KDM5A-201ENST00000399788 BRCA2P51587 3418 aa4.24□□□□□ -1.73
KDM5A-201ENST00000399788 ATMQ13315 3056 aa4.24□□□□□ -1.73
KDM5A-201ENST00000399788 BOD1L1Q8NFC6 3051 aa4.23□□□□□ -1.73
KDM5A-201ENST00000399788 PDZD2O15018 2839 aa4.23□□□□□ -1.73
KDM5A-201ENST00000399788 DCHS2Q6V1P9 2916 aa4.23□□□□□ -1.73
KDM5A-201ENST00000399788 NIPBLQ6KC79 2804 aaeCLIP4.22□□□□□ -1.73
KDM5A-201ENST00000399788 H0YAA0 97 aa4.2□□□□□ -1.74
KDM5A-201ENST00000399788 TENM2Q9NT68 2774 aa4.19□□□□□ -1.74
KDM5A-201ENST00000399788 TNRC18O15417 2968 aaPredicted RBP4.19□□□□□ -1.74
KDM5A-201ENST00000399788 PKD1L1Q8TDX9 2849 aa4.18□□□□□ -1.74
KDM5A-201ENST00000399788 ZZEF1O43149 2961 aa4.18□□□□□ -1.74
KDM5A-201ENST00000399788 SPEGQ15772 3267 aa4.17□□□□□ -1.74
KDM5A-201ENST00000399788 COL6A3P12111 3177 aa4.17□□□□□ -1.74
KDM5A-201ENST00000399788 ADGRG4Q8IZF6 3080 aa4.13□□□□□ -1.75
KDM5A-201ENST00000399788 NBEAQ8NFP9 2946 aa4.12□□□□□ -1.75
KDM5A-201ENST00000399788 TGP01266 2768 aa4.11□□□□□ -1.75
KDM5A-201ENST00000399788 CELSR1Q9NYQ6 3014 aa4.11□□□□□ -1.75
KDM5A-201ENST00000399788 VWFP04275 2813 aa4.11□□□□□ -1.75
KDM5A-201ENST00000399788 KRTAP12-2P59991 146 aa4.09□□□□□ -1.75
KDM5A-201ENST00000399788 CDH23Q9H251 3354 aa4.08□□□□□ -1.76
KDM5A-201ENST00000399788 KRTAP15-1Q3LI76 137 aa4.05□□□□□ -1.76
KDM5A-201ENST00000399788 DNAH14Q0VDD8 3507 aa4.05□□□□□ -1.76
KDM5A-201ENST00000399788 KRTAP13-4Q3LI77 160 aa4.03□□□□□ -1.76
KDM5A-201ENST00000399788 USP34Q70CQ2 3546 aa4.02□□□□□ -1.77
KDM5A-201ENST00000399788 DMXL1Q9Y485 3027 aa4.02□□□□□ -1.77
KDM5A-201ENST00000399788 SZT2Q5T011 3432 aa4.01□□□□□ -1.77
KDM5A-201ENST00000399788 ZANQ9Y493 2812 aa4.01□□□□□ -1.77
KDM5A-201ENST00000399788 EYSQ5T1H1 3165 aa4□□□□□ -1.77
KDM5A-201ENST00000399788 SRRM2Q9UQ35 2752 aaKnown RBP3.97□□□□□ -1.77
KDM5A-201ENST00000399788 FBN2P35556 2912 aa3.97□□□□□ -1.77
KDM5A-201ENST00000399788 CRCT1Q9UGL9 99 aa3.97□□□□□ -1.77
KDM5A-201ENST00000399788 ZFHX4Q86UP3 3567 aa3.93□□□□□ -1.78
KDM5A-201ENST00000399788 KRTAP12-1P59990 96 aa3.92□□□□□ -1.78
KDM5A-201ENST00000399788 FBN3Q75N90 2809 aa3.91□□□□□ -1.78
KDM5A-201ENST00000399788 MXRA5Q9NR99 2828 aa3.86□□□□□ -1.79
KDM5A-201ENST00000399788 NBPF19A0A087WUL8 3843 aa3.85□□□□□ -1.79
KDM5A-201ENST00000399788 COL7A1Q02388 2944 aa3.83□□□□□ -1.8
KDM5A-201ENST00000399788 KRTAP10-12P60413 245 aa3.81□□□□□ -1.8
KDM5A-201ENST00000399788 MYO15AQ9UKN7 3530 aa3.8□□□□□ -1.8
KDM5A-201ENST00000399788 LOC400499M0QZD8 3231 aa3.79□□□□□ -1.8
KDM5A-201ENST00000399788 HRNRQ86YZ3 2850 aaPredicted RBP3.77□□□□□ -1.81
KDM5A-201ENST00000399788 DCHS1Q96JQ0 3298 aa3.75□□□□□ -1.81
KDM5A-201ENST00000399788 ZFHX3Q15911 3703 aa3.75□□□□□ -1.81
KDM5A-201ENST00000399788 MEGF8Q7Z7M0 2845 aa3.74□□□□□ -1.81
KDM5A-201ENST00000399788 KRTAP3-1Q9BYR8 98 aa3.74□□□□□ -1.81
KDM5A-201ENST00000399788 WDFY3Q8IZQ1 3526 aa3.73□□□□□ -1.81
KDM5A-201ENST00000399788 ASPMQ8IZT6 3477 aa3.73□□□□□ -1.81
KDM5A-201ENST00000399788 INE1O15225 51 aa3.69□□□□□ -1.82
KDM5A-201ENST00000399788 SPTBN5Q9NRC6 3674 aaKnown RBP3.68□□□□□ -1.82
KDM5A-201ENST00000399788 MT1HL1P0DM35 61 aa3.67□□□□□ -1.82
KDM5A-201ENST00000399788 KRTAP12-3P60328 96 aa3.66□□□□□ -1.82
KDM5A-201ENST00000399788 KRTAP10-6P60371 365 aaPredicted RBP3.66□□□□□ -1.82
KDM5A-201ENST00000399788 LORP23490 312 aaPredicted RBP3.65□□□□□ -1.82
KDM5A-201ENST00000399788 KRTAP8-1Q8IUC2 63 aa3.65□□□□□ -1.83
KDM5A-201ENST00000399788 FBN1P35555 2871 aaKnown RBP3.65□□□□□ -1.83
KDM5A-201ENST00000399788 KRTAP4-5Q9BYR2 181 aa3.61□□□□□ -1.83
KDM5A-201ENST00000399788 KRTAP10-5P60370 271 aa3.6□□□□□ -1.83
KDM5A-201ENST00000399788 RELNP78509 3460 aa3.59□□□□□ -1.83
KDM5A-201ENST00000399788 LCE3AQ5TA76 89 aa3.55□□□□□ -1.84
KDM5A-201ENST00000399788 KRTAP3-3Q9BYR6 98 aa3.48□□□□□ -1.85
KDM5A-201ENST00000399788 KRTAP3-2Q9BYR7 98 aa3.47□□□□□ -1.85
KDM5A-201ENST00000399788 KRTAP23-1A1A580 65 aa3.46□□□□□ -1.86
KDM5A-201ENST00000399788 SPENQ96T58 3664 aaKnown RBP3.45□□□□□ -1.86
KDM5A-201ENST00000399788 LAMA5O15230 3695 aa3.45□□□□□ -1.86
KDM5A-201ENST00000399788 MUC3AQ02505 3323 aa3.43□□□□□ -1.86
KDM5A-201ENST00000399788 OTOGQ6ZRI0 2925 aa3.42□□□□□ -1.86
KDM5A-201ENST00000399788 KRTAP10-7P60409 375 aaPredicted RBP3.42□□□□□ -1.86
KDM5A-201ENST00000399788 CSMD1Q96PZ7 3565 aa3.41□□□□□ -1.86
KDM5A-201ENST00000399788 TRRAPQ9Y4A5 3859 aa3.4□□□□□ -1.87
KDM5A-201ENST00000399788 DMDP11532 3685 aa3.39□□□□□ -1.87
KDM5A-201ENST00000399788 SPRR2FQ96RM1 72 aa3.39□□□□□ -1.87
KDM5A-201ENST00000399788 KRTAP10-4P60372 401 aaPredicted RBP3.39□□□□□ -1.87
KDM5A-201ENST00000399788 CSMD2Q7Z408 3487 aa3.34□□□□□ -1.88
KDM5A-201ENST00000399788 CUBNO60494 3623 aa3.33□□□□□ -1.88
KDM5A-201ENST00000399788 SMG1Q96Q15 3661 aaKnown RBP3.32□□□□□ -1.88
KDM5A-201ENST00000399788 ANK3Q12955 4377 aaKnown RBP3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms