RNA–Protein interactions for RNA: ENST00000389757.7

PKP4-201, Transcript of plakophilin 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PKP4, Length 5,777 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-201ENST00000389757 Q5XG85 94 aa5.85□□□□□ -1.47
PKP4-201ENST00000389757 KTN1-AS1Q86SY8 53 aa5.84□□□□□ -1.48
PKP4-201ENST00000389757 DCHS2Q6V1P9 2916 aa5.83□□□□□ -1.48
PKP4-201ENST00000389757 ASH1LQ9NR48 2969 aaKnown RBP5.83□□□□□ -1.48
PKP4-201ENST00000389757 CYSTM1Q9H1C7 97 aa5.83□□□□□ -1.48
PKP4-201ENST00000389757 M0QZ58 72 aa5.82□□□□□ -1.48
PKP4-201ENST00000389757 USP34Q70CQ2 3546 aa5.82□□□□□ -1.48
PKP4-201ENST00000389757 CFAP47Q6ZTR5 3102 aa5.79□□□□□ -1.48
PKP4-201ENST00000389757 HRNRQ86YZ3 2850 aaPredicted RBP5.79□□□□□ -1.48
PKP4-201ENST00000389757 LCA10Q71F78 164 aa5.79□□□□□ -1.48
PKP4-201ENST00000389757 H1FX-AS1Q4G0G2 97 aa5.79□□□□□ -1.48
PKP4-201ENST00000389757 RPL37P61927 97 aaKnown RBP5.78□□□□□ -1.48
PKP4-201ENST00000389757 ADM2Q7Z4H4 148 aa5.77□□□□□ -1.49
PKP4-201ENST00000389757 PLAC4Q8WY50 150 aa5.74□□□□□ -1.49
PKP4-201ENST00000389757 NF1P21359 2839 aa5.74□□□□□ -1.49
PKP4-201ENST00000389757 Q5VV11 94 aa5.74□□□□□ -1.49
PKP4-201ENST00000389757 LUZP6Q538Z0 58 aa5.72□□□□□ -1.49
PKP4-201ENST00000389757 SPEGQ15772 3267 aa5.7□□□□□ -1.5
PKP4-201ENST00000389757 C20orf166-AS1Q96NR2 134 aa5.67□□□□□ -1.5
PKP4-201ENST00000389757 LOC400499M0QZD8 3231 aa5.67□□□□□ -1.5
PKP4-201ENST00000389757 KRTAP1-4P0C5Y4 121 aa5.67□□□□□ -1.5
PKP4-201ENST00000389757 FBN2P35556 2912 aa5.67□□□□□ -1.5
PKP4-201ENST00000389757 MXRA5Q9NR99 2828 aa5.66□□□□□ -1.5
PKP4-201ENST00000389757 SPATA8Q6RVD6 105 aa5.65□□□□□ -1.5
PKP4-201ENST00000389757 A8MUU9 505 aa5.65□□□□□ -1.51
PKP4-201ENST00000389757 TENM2Q9NT68 2774 aa5.63□□□□□ -1.51
PKP4-201ENST00000389757 TENM1Q9UKZ4 2725 aa5.63□□□□□ -1.51
PKP4-201ENST00000389757 ROMO1P60602 79 aa5.62□□□□□ -1.51
PKP4-201ENST00000389757 TENM3Q9P273 2699 aa5.61□□□□□ -1.51
PKP4-201ENST00000389757 XP32Q5T750 250 aa5.58□□□□□ -1.52
PKP4-201ENST00000389757 PRAC1Q96KF2 57 aa5.57□□□□□ -1.52
PKP4-201ENST00000389757 TPRXLQ17RH7 258 aa5.54□□□□□ -1.52
PKP4-201ENST00000389757 PDZD2O15018 2839 aa5.54□□□□□ -1.52
PKP4-201ENST00000389757 A0A1B0GVY2 172 aa5.53□□□□□ -1.52
PKP4-201ENST00000389757 CELSR1Q9NYQ6 3014 aa5.52□□□□□ -1.53
PKP4-201ENST00000389757 DCHS1Q96JQ0 3298 aa5.49□□□□□ -1.53
PKP4-201ENST00000389757 MYO15AQ9UKN7 3530 aa5.48□□□□□ -1.53
PKP4-201ENST00000389757 A8MU10 97 aa5.48□□□□□ -1.53
PKP4-201ENST00000389757 PKD1L1Q8TDX9 2849 aa5.48□□□□□ -1.53
PKP4-201ENST00000389757 RELNP78509 3460 aa5.46□□□□□ -1.54
PKP4-201ENST00000389757 KRTAP13-3Q3SY46 172 aa5.44□□□□□ -1.54
PKP4-201ENST00000389757 OTOGQ6ZRI0 2925 aa5.43□□□□□ -1.54
PKP4-201ENST00000389757 KRTAP10-8P60410 259 aa5.42□□□□□ -1.54
PKP4-201ENST00000389757 KRTAP16-1A8MUX0 517 aa5.39□□□□□ -1.55
PKP4-201ENST00000389757 TNP1P09430 55 aa5.36□□□□□ -1.55
PKP4-201ENST00000389757 TGP01266 2768 aa5.35□□□□□ -1.55
PKP4-201ENST00000389757 H3BS24 57 aa5.35□□□□□ -1.55
PKP4-201ENST00000389757 VWFP04275 2813 aa5.34□□□□□ -1.55
PKP4-201ENST00000389757 WDFY3Q8IZQ1 3526 aa5.34□□□□□ -1.55
PKP4-201ENST00000389757 KRTAP10-10P60014 251 aa5.32□□□□□ -1.56
PKP4-201ENST00000389757 NBPF19A0A087WUL8 3843 aa5.31□□□□□ -1.56
PKP4-201ENST00000389757 FBN1P35555 2871 aaKnown RBP5.3□□□□□ -1.56
PKP4-201ENST00000389757 LAMA5O15230 3695 aa5.3□□□□□ -1.56
PKP4-201ENST00000389757 A0A0A0MQY5 61 aa5.3□□□□□ -1.56
PKP4-201ENST00000389757 KRTAP25-1Q3LHN0 102 aa5.26□□□□□ -1.57
PKP4-201ENST00000389757 A6NN06 94 aa5.25□□□□□ -1.57
PKP4-201ENST00000389757 ASPMQ8IZT6 3477 aa5.24□□□□□ -1.57
PKP4-201ENST00000389757 ZFHX3Q15911 3703 aa5.23□□□□□ -1.57
PKP4-201ENST00000389757 MUC3AQ02505 3323 aa5.22□□□□□ -1.57
PKP4-201ENST00000389757 PRO2289Q9P1D8 64 aa5.19□□□□□ -1.58
PKP4-201ENST00000389757 ANK3Q12955 4377 aaKnown RBP5.17□□□□□ -1.58
PKP4-201ENST00000389757 DMDP11532 3685 aa5.16□□□□□ -1.58
PKP4-201ENST00000389757 P0C880 135 aa5.15□□□□□ -1.58
PKP4-201ENST00000389757 ZFHX4Q86UP3 3567 aa5.15□□□□□ -1.59
PKP4-201ENST00000389757 PP632Q6XCG6 107 aa5.15□□□□□ -1.59
PKP4-201ENST00000389757 H0YAA0 97 aa5.13□□□□□ -1.59
PKP4-201ENST00000389757 SRRM2Q9UQ35 2752 aaKnown RBP5.1□□□□□ -1.59
PKP4-201ENST00000389757 C10orf95Q9H7T3 257 aa5.08□□□□□ -1.6
PKP4-201ENST00000389757 SMG1Q96Q15 3661 aaKnown RBP5.06□□□□□ -1.6
PKP4-201ENST00000389757 FBN3Q75N90 2809 aa5.05□□□□□ -1.6
PKP4-201ENST00000389757 CSMD1Q96PZ7 3565 aa5.02□□□□□ -1.61
PKP4-201ENST00000389757 CSMD2Q7Z408 3487 aa5.02□□□□□ -1.61
PKP4-201ENST00000389757 MT1HL1P0DM35 61 aa5.02□□□□□ -1.61
PKP4-201ENST00000389757 MEGF8Q7Z7M0 2845 aa4.97□□□□□ -1.61
PKP4-201ENST00000389757 TRRAPQ9Y4A5 3859 aa4.95□□□□□ -1.62
PKP4-201ENST00000389757 NDUFAF8A1L188 74 aa4.94□□□□□ -1.62
PKP4-201ENST00000389757 KRTAP3-1Q9BYR8 98 aa4.93□□□□□ -1.62
PKP4-201ENST00000389757 KRTAP4-5Q9BYR2 181 aa4.93□□□□□ -1.62
PKP4-201ENST00000389757 KRTAP10-4P60372 401 aaPredicted RBP4.9□□□□□ -1.62
PKP4-201ENST00000389757 SPENQ96T58 3664 aaKnown RBP4.9□□□□□ -1.62
PKP4-201ENST00000389757 COL7A1Q02388 2944 aa4.89□□□□□ -1.63
PKP4-201ENST00000389757 KRTAP12-2P59991 146 aa4.88□□□□□ -1.63
PKP4-201ENST00000389757 SVEP1Q4LDE5 3571 aa4.86□□□□□ -1.63
PKP4-201ENST00000389757 BSNQ9UPA5 3926 aa4.83□□□□□ -1.64
PKP4-201ENST00000389757 HUWE1Q7Z6Z7 4374 aaKnown RBP4.83□□□□□ -1.64
PKP4-201ENST00000389757 KRTAP12-1P59990 96 aa4.82□□□□□ -1.64
PKP4-201ENST00000389757 KRTAP13-4Q3LI77 160 aa4.82□□□□□ -1.64
PKP4-201ENST00000389757 ALMS1Q8TCU4 4167 aa4.75□□□□□ -1.65
PKP4-201ENST00000389757 KRTAP10-6P60371 365 aaPredicted RBP4.74□□□□□ -1.65
PKP4-201ENST00000389757 CUBNO60494 3623 aa4.73□□□□□ -1.65
PKP4-201ENST00000389757 DNAH9Q9NYC9 4486 aa4.64□□□□□ -1.67
PKP4-201ENST00000389757 KRTAP3-3Q9BYR6 98 aa4.63□□□□□ -1.67
PKP4-201ENST00000389757 KRTAP15-1Q3LI76 137 aa4.6□□□□□ -1.67
PKP4-201ENST00000389757 KRTAP3-2Q9BYR7 98 aa4.59□□□□□ -1.67
PKP4-201ENST00000389757 DNAH5Q8TE73 4624 aa4.58□□□□□ -1.68
PKP4-201ENST00000389757 DNHD1Q96M86 4753 aa4.58□□□□□ -1.68
PKP4-201ENST00000389757 VPS13CQ709C8 3753 aa4.58□□□□□ -1.68
PKP4-201ENST00000389757 AKAP9Q99996 3911 aa4.56□□□□□ -1.68
PKP4-201ENST00000389757 KRTAP10-12P60413 245 aa4.53□□□□□ -1.68
PKP4-201ENST00000389757 ZNF469Q96JG9 3925 aaPredicted RBP4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms