RNA–Protein interactions for RNA: ENST00000379053.4

LINC00654-201, long intergenic non-protein coding RNA 654, humanhuman

TSL 1 (best) BASIC

Gene LINC00654, Length 6,113 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00654-201ENST00000379053 COL12A1Q99715 3063 aa5.93□□□□□ -1.46
LINC00654-201ENST00000379053 ATMQ13315 3056 aa5.93□□□□□ -1.46
LINC00654-201ENST00000379053 KRTAP10-8P60410 259 aa5.92□□□□□ -1.46
LINC00654-201ENST00000379053 XP32Q5T750 250 aa5.92□□□□□ -1.46
LINC00654-201ENST00000379053 TPRXLQ17RH7 258 aa5.92□□□□□ -1.46
LINC00654-201ENST00000379053 KRTAP10-10P60014 251 aa5.91□□□□□ -1.46
LINC00654-201ENST00000379053 NIPBLQ6KC79 2804 aaeCLIP5.91□□□□□ -1.46
LINC00654-201ENST00000379053 APCP25054 2843 aa5.9□□□□□ -1.46
LINC00654-201ENST00000379053 VPS13AQ96RL7 3174 aa5.89□□□□□ -1.47
LINC00654-201ENST00000379053 CDH23Q9H251 3354 aa5.88□□□□□ -1.47
LINC00654-201ENST00000379053 KRTAP1-4P0C5Y4 121 aa5.86□□□□□ -1.47
LINC00654-201ENST00000379053 LAMA1P25391 3075 aa5.86□□□□□ -1.47
LINC00654-201ENST00000379053 TENM3Q9P273 2699 aa5.86□□□□□ -1.47
LINC00654-201ENST00000379053 FRYLO94915 3013 aa5.85□□□□□ -1.47
LINC00654-201ENST00000379053 ASH1LQ9NR48 2969 aaKnown RBP5.85□□□□□ -1.47
LINC00654-201ENST00000379053 LRBAP50851 2863 aa5.84□□□□□ -1.47
LINC00654-201ENST00000379053 SPTBN5Q9NRC6 3674 aaKnown RBP5.84□□□□□ -1.48
LINC00654-201ENST00000379053 UNC80Q8N2C7 3258 aa5.83□□□□□ -1.48
LINC00654-201ENST00000379053 CELSR2Q9HCU4 2923 aa5.82□□□□□ -1.48
LINC00654-201ENST00000379053 C10orf95Q9H7T3 257 aa5.81□□□□□ -1.48
LINC00654-201ENST00000379053 KALRNO60229 2985 aa5.8□□□□□ -1.48
LINC00654-201ENST00000379053 SZT2Q5T011 3432 aa5.78□□□□□ -1.48
LINC00654-201ENST00000379053 TENM1Q9UKZ4 2725 aa5.77□□□□□ -1.49
LINC00654-201ENST00000379053 DCHS2Q6V1P9 2916 aa5.76□□□□□ -1.49
LINC00654-201ENST00000379053 BOD1L1Q8NFC6 3051 aa5.73□□□□□ -1.49
LINC00654-201ENST00000379053 DNAH14Q0VDD8 3507 aa5.73□□□□□ -1.49
LINC00654-201ENST00000379053 TENM2Q9NT68 2774 aa5.73□□□□□ -1.49
LINC00654-201ENST00000379053 ZZEF1O43149 2961 aa5.72□□□□□ -1.49
LINC00654-201ENST00000379053 CELSR3Q9NYQ7 3312 aa5.7□□□□□ -1.5
LINC00654-201ENST00000379053 KRTAP13-3Q3SY46 172 aa5.7□□□□□ -1.5
LINC00654-201ENST00000379053 PP632Q6XCG6 107 aa5.7□□□□□ -1.5
LINC00654-201ENST00000379053 EYSQ5T1H1 3165 aa5.7□□□□□ -1.5
LINC00654-201ENST00000379053 NBEAQ8NFP9 2946 aa5.68□□□□□ -1.5
LINC00654-201ENST00000379053 NF1P21359 2839 aa5.68□□□□□ -1.5
LINC00654-201ENST00000379053 ADGRG4Q8IZF6 3080 aa5.67□□□□□ -1.5
LINC00654-201ENST00000379053 TNRC18O15417 2968 aaPredicted RBP5.66□□□□□ -1.5
LINC00654-201ENST00000379053 VCANP13611 3396 aa5.66□□□□□ -1.5
LINC00654-201ENST00000379053 USP34Q70CQ2 3546 aa5.63□□□□□ -1.51
LINC00654-201ENST00000379053 P0C880 135 aa5.61□□□□□ -1.51
LINC00654-201ENST00000379053 H0YAA0 97 aa5.61□□□□□ -1.51
LINC00654-201ENST00000379053 ZANQ9Y493 2812 aa5.6□□□□□ -1.51
LINC00654-201ENST00000379053 CFAP47Q6ZTR5 3102 aa5.6□□□□□ -1.51
LINC00654-201ENST00000379053 PKD1L1Q8TDX9 2849 aa5.58□□□□□ -1.52
LINC00654-201ENST00000379053 MYO15AQ9UKN7 3530 aa5.54□□□□□ -1.52
LINC00654-201ENST00000379053 COL6A3P12111 3177 aa5.53□□□□□ -1.52
LINC00654-201ENST00000379053 WDFY3Q8IZQ1 3526 aa5.5□□□□□ -1.53
LINC00654-201ENST00000379053 SPEGQ15772 3267 aa5.47□□□□□ -1.53
LINC00654-201ENST00000379053 VWFP04275 2813 aa5.46□□□□□ -1.54
LINC00654-201ENST00000379053 DMDP11532 3685 aa5.46□□□□□ -1.54
LINC00654-201ENST00000379053 MXRA5Q9NR99 2828 aa5.45□□□□□ -1.54
LINC00654-201ENST00000379053 FBN2P35556 2912 aa5.43□□□□□ -1.54
LINC00654-201ENST00000379053 PDZD2O15018 2839 aa5.42□□□□□ -1.54
LINC00654-201ENST00000379053 TGP01266 2768 aa5.4□□□□□ -1.54
LINC00654-201ENST00000379053 CELSR1Q9NYQ6 3014 aa5.39□□□□□ -1.55
LINC00654-201ENST00000379053 DMXL1Q9Y485 3027 aa5.38□□□□□ -1.55
LINC00654-201ENST00000379053 HRNRQ86YZ3 2850 aaPredicted RBP5.36□□□□□ -1.55
LINC00654-201ENST00000379053 MUC3AQ02505 3323 aa5.33□□□□□ -1.56
LINC00654-201ENST00000379053 SRRM2Q9UQ35 2752 aaKnown RBP5.32□□□□□ -1.56
LINC00654-201ENST00000379053 SPENQ96T58 3664 aaKnown RBP5.27□□□□□ -1.57
LINC00654-201ENST00000379053 KRTAP12-2P59991 146 aa5.26□□□□□ -1.57
LINC00654-201ENST00000379053 ZFHX4Q86UP3 3567 aa5.25□□□□□ -1.57
LINC00654-201ENST00000379053 KRTAP13-4Q3LI77 160 aa5.23□□□□□ -1.57
LINC00654-201ENST00000379053 FBN3Q75N90 2809 aa5.22□□□□□ -1.57
LINC00654-201ENST00000379053 BSNQ9UPA5 3926 aa5.21□□□□□ -1.58
LINC00654-201ENST00000379053 DCHS1Q96JQ0 3298 aa5.19□□□□□ -1.58
LINC00654-201ENST00000379053 LOC400499M0QZD8 3231 aa5.19□□□□□ -1.58
LINC00654-201ENST00000379053 ASPMQ8IZT6 3477 aa5.18□□□□□ -1.58
LINC00654-201ENST00000379053 KRTAP12-1P59990 96 aa5.15□□□□□ -1.58
LINC00654-201ENST00000379053 KRTAP15-1Q3LI76 137 aa5.15□□□□□ -1.59
LINC00654-201ENST00000379053 FBN1P35555 2871 aaKnown RBP5.12□□□□□ -1.59
LINC00654-201ENST00000379053 KRTAP3-1Q9BYR8 98 aa5.1□□□□□ -1.59
LINC00654-201ENST00000379053 LAMA5O15230 3695 aa5.1□□□□□ -1.59
LINC00654-201ENST00000379053 MT1HL1P0DM35 61 aa5.09□□□□□ -1.6
LINC00654-201ENST00000379053 SMG1Q96Q15 3661 aaKnown RBP5.06□□□□□ -1.6
LINC00654-201ENST00000379053 OTOGQ6ZRI0 2925 aa5.05□□□□□ -1.6
LINC00654-201ENST00000379053 ZFHX3Q15911 3703 aa5.02□□□□□ -1.61
LINC00654-201ENST00000379053 NBPF19A0A087WUL8 3843 aa5.02□□□□□ -1.61
LINC00654-201ENST00000379053 KRTAP4-5Q9BYR2 181 aa5.02□□□□□ -1.61
LINC00654-201ENST00000379053 RELNP78509 3460 aa5□□□□□ -1.61
LINC00654-201ENST00000379053 CRCT1Q9UGL9 99 aa5□□□□□ -1.61
LINC00654-201ENST00000379053 KRTAP23-1A1A580 65 aa4.96□□□□□ -1.62
LINC00654-201ENST00000379053 KRTAP10-6P60371 365 aaPredicted RBP4.94□□□□□ -1.62
LINC00654-201ENST00000379053 COL7A1Q02388 2944 aa4.94□□□□□ -1.62
LINC00654-201ENST00000379053 KRTAP10-12P60413 245 aa4.94□□□□□ -1.62
LINC00654-201ENST00000379053 MEGF8Q7Z7M0 2845 aa4.91□□□□□ -1.62
LINC00654-201ENST00000379053 LORP23490 312 aaPredicted RBP4.88□□□□□ -1.63
LINC00654-201ENST00000379053 INE1O15225 51 aa4.87□□□□□ -1.63
LINC00654-201ENST00000379053 KRTAP10-4P60372 401 aaPredicted RBP4.83□□□□□ -1.64
LINC00654-201ENST00000379053 CSMD1Q96PZ7 3565 aa4.82□□□□□ -1.64
LINC00654-201ENST00000379053 KRTAP8-1Q8IUC2 63 aa4.81□□□□□ -1.64
LINC00654-201ENST00000379053 VPS13CQ709C8 3753 aa4.81□□□□□ -1.64
LINC00654-201ENST00000379053 ANK3Q12955 4377 aaKnown RBP4.81□□□□□ -1.64
LINC00654-201ENST00000379053 SVEP1Q4LDE5 3571 aa4.78□□□□□ -1.64
LINC00654-201ENST00000379053 KRTAP3-3Q9BYR6 98 aa4.75□□□□□ -1.65
LINC00654-201ENST00000379053 KRTAP12-3P60328 96 aa4.75□□□□□ -1.65
LINC00654-201ENST00000379053 KRTAP3-2Q9BYR7 98 aa4.74□□□□□ -1.65
LINC00654-201ENST00000379053 AKAP9Q99996 3911 aa4.71□□□□□ -1.66
LINC00654-201ENST00000379053 CSMD2Q7Z408 3487 aa4.68□□□□□ -1.66
LINC00654-201ENST00000379053 LCE3AQ5TA76 89 aa4.65□□□□□ -1.66
LINC00654-201ENST00000379053 TRRAPQ9Y4A5 3859 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms