RNA–Protein interactions for RNA: ENST00000367142.4

NUCKS1-201, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUCKS1, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-201ENST00000367142 FRYQ5TBA9 3013 aa7.68□□□□□ -1.18
NUCKS1-201ENST00000367142 ITPR1Q14643 2758 aa7.64□□□□□ -1.19
NUCKS1-201ENST00000367142 SPEGQ15772 3267 aa7.63□□□□□ -1.19
NUCKS1-201ENST00000367142 SZT2Q5T011 3432 aa7.62□□□□□ -1.19
NUCKS1-201ENST00000367142 DSPP15924 2871 aaKnown RBP7.61□□□□□ -1.19
NUCKS1-201ENST00000367142 CFAP54Q96N23 3096 aa7.6□□□□□ -1.19
NUCKS1-201ENST00000367142 MYO15AQ9UKN7 3530 aa7.6□□□□□ -1.19
NUCKS1-201ENST00000367142 TENM4Q6N022 2769 aa7.59□□□□□ -1.19
NUCKS1-201ENST00000367142 APCP25054 2843 aa7.58□□□□□ -1.2
NUCKS1-201ENST00000367142 KRTAP15-1Q3LI76 137 aa7.57□□□□□ -1.2
NUCKS1-201ENST00000367142 HIVEP1P15822 2718 aa7.56□□□□□ -1.2
NUCKS1-201ENST00000367142 TRANK1O15050 2925 aa7.56□□□□□ -1.2
NUCKS1-201ENST00000367142 UTP20O75691 2785 aaKnown RBP7.53□□□□□ -1.2
NUCKS1-201ENST00000367142 KRTAP12-1P59990 96 aa7.51□□□□□ -1.21
NUCKS1-201ENST00000367142 LAMA1P25391 3075 aa7.49□□□□□ -1.21
NUCKS1-201ENST00000367142 REV3LO60673 3130 aa7.48□□□□□ -1.21
NUCKS1-201ENST00000367142 WDFY3Q8IZQ1 3526 aa7.43□□□□□ -1.22
NUCKS1-201ENST00000367142 SPTBN5Q9NRC6 3674 aaKnown RBP7.42□□□□□ -1.22
NUCKS1-201ENST00000367142 EYSQ5T1H1 3165 aa7.42□□□□□ -1.22
NUCKS1-201ENST00000367142 WDFY4Q6ZS81 3184 aa7.42□□□□□ -1.22
NUCKS1-201ENST00000367142 CRYBG3Q68DQ2 2970 aa7.41□□□□□ -1.22
NUCKS1-201ENST00000367142 PRUNE2Q8WUY3 3088 aa7.38□□□□□ -1.23
NUCKS1-201ENST00000367142 TRIOO75962 3097 aa7.38□□□□□ -1.23
NUCKS1-201ENST00000367142 NIPBLQ6KC79 2804 aaeCLIP7.31□□□□□ -1.24
NUCKS1-201ENST00000367142 LRBAP50851 2863 aa7.31□□□□□ -1.24
NUCKS1-201ENST00000367142 TACC2O95359 2948 aa7.3□□□□□ -1.24
NUCKS1-201ENST00000367142 KRTAP3-1Q9BYR8 98 aa7.3□□□□□ -1.24
NUCKS1-201ENST00000367142 CELSR3Q9NYQ7 3312 aa7.28□□□□□ -1.24
NUCKS1-201ENST00000367142 TENM2Q9NT68 2774 aa7.27□□□□□ -1.25
NUCKS1-201ENST00000367142 FRYLO94915 3013 aa7.24□□□□□ -1.25
NUCKS1-201ENST00000367142 FREM2Q5SZK8 3169 aa7.24□□□□□ -1.25
NUCKS1-201ENST00000367142 VPS13AQ96RL7 3174 aa7.23□□□□□ -1.25
NUCKS1-201ENST00000367142 FLNCQ14315 2725 aa7.22□□□□□ -1.25
NUCKS1-201ENST00000367142 COL6A3P12111 3177 aa7.21□□□□□ -1.25
NUCKS1-201ENST00000367142 CRCT1Q9UGL9 99 aa7.21□□□□□ -1.26
NUCKS1-201ENST00000367142 KALRNO60229 2985 aa7.21□□□□□ -1.26
NUCKS1-201ENST00000367142 ATMQ13315 3056 aa7.18□□□□□ -1.26
NUCKS1-201ENST00000367142 TENM1Q9UKZ4 2725 aa7.17□□□□□ -1.26
NUCKS1-201ENST00000367142 KRTAP10-12P60413 245 aa7.16□□□□□ -1.26
NUCKS1-201ENST00000367142 COL12A1Q99715 3063 aa7.14□□□□□ -1.27
NUCKS1-201ENST00000367142 ASH1LQ9NR48 2969 aaKnown RBP7.14□□□□□ -1.27
NUCKS1-201ENST00000367142 NBEAQ8NFP9 2946 aa7.14□□□□□ -1.27
NUCKS1-201ENST00000367142 KRTAP10-6P60371 365 aaPredicted RBP7.12□□□□□ -1.27
NUCKS1-201ENST00000367142 TGP01266 2768 aa7.12□□□□□ -1.27
NUCKS1-201ENST00000367142 DMXL2Q8TDJ6 3036 aa7.12□□□□□ -1.27
NUCKS1-201ENST00000367142 TENM3Q9P273 2699 aa7.1□□□□□ -1.27
NUCKS1-201ENST00000367142 INE1O15225 51 aa7.08□□□□□ -1.28
NUCKS1-201ENST00000367142 CELSR2Q9HCU4 2923 aa7.08□□□□□ -1.28
NUCKS1-201ENST00000367142 DMDP11532 3685 aa7.06□□□□□ -1.28
NUCKS1-201ENST00000367142 DCHS2Q6V1P9 2916 aa7.04□□□□□ -1.28
NUCKS1-201ENST00000367142 MT1HL1P0DM35 61 aa7.03□□□□□ -1.28
NUCKS1-201ENST00000367142 ASPMQ8IZT6 3477 aa6.97□□□□□ -1.29
NUCKS1-201ENST00000367142 ZFHX4Q86UP3 3567 aa6.97□□□□□ -1.29
NUCKS1-201ENST00000367142 DCHS1Q96JQ0 3298 aa6.95□□□□□ -1.3
NUCKS1-201ENST00000367142 CFAP47Q6ZTR5 3102 aa6.9□□□□□ -1.3
NUCKS1-201ENST00000367142 KRTAP12-3P60328 96 aa6.9□□□□□ -1.31
NUCKS1-201ENST00000367142 LOC400499M0QZD8 3231 aa6.89□□□□□ -1.31
NUCKS1-201ENST00000367142 NF1P21359 2839 aa6.89□□□□□ -1.31
NUCKS1-201ENST00000367142 MUC3AQ02505 3323 aa6.87□□□□□ -1.31
NUCKS1-201ENST00000367142 SMG1Q96Q15 3661 aaKnown RBP6.87□□□□□ -1.31
NUCKS1-201ENST00000367142 ZZEF1O43149 2961 aa6.86□□□□□ -1.31
NUCKS1-201ENST00000367142 ADGRG4Q8IZF6 3080 aa6.86□□□□□ -1.31
NUCKS1-201ENST00000367142 SPENQ96T58 3664 aaKnown RBP6.83□□□□□ -1.32
NUCKS1-201ENST00000367142 KRTAP3-2Q9BYR7 98 aa6.82□□□□□ -1.32
NUCKS1-201ENST00000367142 BOD1L1Q8NFC6 3051 aa6.81□□□□□ -1.32
NUCKS1-201ENST00000367142 KRTAP3-3Q9BYR6 98 aa6.8□□□□□ -1.32
NUCKS1-201ENST00000367142 KRTAP4-5Q9BYR2 181 aa6.78□□□□□ -1.32
NUCKS1-201ENST00000367142 CSMD1Q96PZ7 3565 aa6.77□□□□□ -1.33
NUCKS1-201ENST00000367142 KRTAP23-1A1A580 65 aa6.76□□□□□ -1.33
NUCKS1-201ENST00000367142 LCE3AQ5TA76 89 aa6.75□□□□□ -1.33
NUCKS1-201ENST00000367142 HRNRQ86YZ3 2850 aaPredicted RBP6.75□□□□□ -1.33
NUCKS1-201ENST00000367142 CELSR1Q9NYQ6 3014 aa6.74□□□□□ -1.33
NUCKS1-201ENST00000367142 PDZD2O15018 2839 aa6.73□□□□□ -1.33
NUCKS1-201ENST00000367142 ZANQ9Y493 2812 aa6.72□□□□□ -1.33
NUCKS1-201ENST00000367142 KRTAP8-1Q8IUC2 63 aa6.72□□□□□ -1.33
NUCKS1-201ENST00000367142 LAMA5O15230 3695 aa6.71□□□□□ -1.34
NUCKS1-201ENST00000367142 TNRC18O15417 2968 aaPredicted RBP6.67□□□□□ -1.34
NUCKS1-201ENST00000367142 KRTAP10-4P60372 401 aaPredicted RBP6.66□□□□□ -1.34
NUCKS1-201ENST00000367142 DMXL1Q9Y485 3027 aa6.65□□□□□ -1.34
NUCKS1-201ENST00000367142 PKD1L1Q8TDX9 2849 aa6.65□□□□□ -1.34
NUCKS1-201ENST00000367142 MXRA5Q9NR99 2828 aa6.64□□□□□ -1.35
NUCKS1-201ENST00000367142 KRTAP10-5P60370 271 aa6.63□□□□□ -1.35
NUCKS1-201ENST00000367142 SVEP1Q4LDE5 3571 aa6.61□□□□□ -1.35
NUCKS1-201ENST00000367142 VWFP04275 2813 aa6.6□□□□□ -1.35
NUCKS1-201ENST00000367142 FBN2P35556 2912 aa6.59□□□□□ -1.35
NUCKS1-201ENST00000367142 RELNP78509 3460 aa6.56□□□□□ -1.36
NUCKS1-201ENST00000367142 LORP23490 312 aaPredicted RBP6.53□□□□□ -1.36
NUCKS1-201ENST00000367142 ALMS1Q8TCU4 4167 aa6.52□□□□□ -1.37
NUCKS1-201ENST00000367142 FBN3Q75N90 2809 aa6.48□□□□□ -1.37
NUCKS1-201ENST00000367142 ZFHX3Q15911 3703 aa6.47□□□□□ -1.37
NUCKS1-201ENST00000367142 BSNQ9UPA5 3926 aa6.45□□□□□ -1.38
NUCKS1-201ENST00000367142 HUWE1Q7Z6Z7 4374 aaKnown RBP6.44□□□□□ -1.38
NUCKS1-201ENST00000367142 ANK3Q12955 4377 aaKnown RBP6.42□□□□□ -1.38
NUCKS1-201ENST00000367142 VPS13CQ709C8 3753 aa6.29□□□□□ -1.4
NUCKS1-201ENST00000367142 NBPF19A0A087WUL8 3843 aa6.28□□□□□ -1.4
NUCKS1-201ENST00000367142 CUBNO60494 3623 aa6.28□□□□□ -1.4
NUCKS1-201ENST00000367142 MT1HP80294 61 aa6.27□□□□□ -1.41
NUCKS1-201ENST00000367142 KRTAP10-7P60409 375 aaPredicted RBP6.26□□□□□ -1.41
NUCKS1-201ENST00000367142 MEGF8Q7Z7M0 2845 aa6.25□□□□□ -1.41
NUCKS1-201ENST00000367142 CSMD2Q7Z408 3487 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms