RNA–Protein interactions for RNA: ENST00000262215.7

ARFGEF1-201, Transcript of ADP ribosylation factor guanine nucleotide exchange factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ARFGEF1, Length 7,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1-201ENST00000262215 SPTBN5Q9NRC6 3674 aaKnown RBP6.62□□□□□ -1.35
ARFGEF1-201ENST00000262215 USP34Q70CQ2 3546 aa6.62□□□□□ -1.35
ARFGEF1-201ENST00000262215 H0YAA0 97 aa6.62□□□□□ -1.35
ARFGEF1-201ENST00000262215 VPS13AQ96RL7 3174 aa6.6□□□□□ -1.35
ARFGEF1-201ENST00000262215 KALRNO60229 2985 aa6.58□□□□□ -1.36
ARFGEF1-201ENST00000262215 APCP25054 2843 aa6.57□□□□□ -1.36
ARFGEF1-201ENST00000262215 XP32Q5T750 250 aa6.57□□□□□ -1.36
ARFGEF1-201ENST00000262215 SZT2Q5T011 3432 aa6.56□□□□□ -1.36
ARFGEF1-201ENST00000262215 NBEAQ8NFP9 2946 aa6.56□□□□□ -1.36
ARFGEF1-201ENST00000262215 ITPR1Q14643 2758 aa6.55□□□□□ -1.36
ARFGEF1-201ENST00000262215 HIVEP1P15822 2718 aa6.52□□□□□ -1.37
ARFGEF1-201ENST00000262215 TACC2O95359 2948 aa6.51□□□□□ -1.37
ARFGEF1-201ENST00000262215 DSPP15924 2871 aaKnown RBP6.5□□□□□ -1.37
ARFGEF1-201ENST00000262215 CFAP47Q6ZTR5 3102 aa6.5□□□□□ -1.37
ARFGEF1-201ENST00000262215 ITPR2Q14571 2701 aa6.49□□□□□ -1.37
ARFGEF1-201ENST00000262215 UTP20O75691 2785 aaKnown RBP6.49□□□□□ -1.37
ARFGEF1-201ENST00000262215 PRO2289Q9P1D8 64 aa6.47□□□□□ -1.37
ARFGEF1-201ENST00000262215 MYO15AQ9UKN7 3530 aa6.47□□□□□ -1.37
ARFGEF1-201ENST00000262215 EYSQ5T1H1 3165 aa6.43□□□□□ -1.38
ARFGEF1-201ENST00000262215 VCANP13611 3396 aa6.4□□□□□ -1.39
ARFGEF1-201ENST00000262215 COL12A1Q99715 3063 aa6.4□□□□□ -1.39
ARFGEF1-201ENST00000262215 KRTAP1-4P0C5Y4 121 aa6.39□□□□□ -1.39
ARFGEF1-201ENST00000262215 LRBAP50851 2863 aa6.39□□□□□ -1.39
ARFGEF1-201ENST00000262215 LAMA1P25391 3075 aa6.38□□□□□ -1.39
ARFGEF1-201ENST00000262215 KRTAP12-2P59991 146 aa6.31□□□□□ -1.4
ARFGEF1-201ENST00000262215 COL6A3P12111 3177 aa6.3□□□□□ -1.4
ARFGEF1-201ENST00000262215 SPEGQ15772 3267 aa6.29□□□□□ -1.4
ARFGEF1-201ENST00000262215 ATMQ13315 3056 aa6.28□□□□□ -1.4
ARFGEF1-201ENST00000262215 TPRXLQ17RH7 258 aa6.28□□□□□ -1.4
ARFGEF1-201ENST00000262215 TENM4Q6N022 2769 aa6.28□□□□□ -1.4
ARFGEF1-201ENST00000262215 BOD1L1Q8NFC6 3051 aa6.28□□□□□ -1.4
ARFGEF1-201ENST00000262215 WDFY3Q8IZQ1 3526 aa6.27□□□□□ -1.41
ARFGEF1-201ENST00000262215 CELSR2Q9HCU4 2923 aa6.26□□□□□ -1.41
ARFGEF1-201ENST00000262215 ADGRG4Q8IZF6 3080 aa6.26□□□□□ -1.41
ARFGEF1-201ENST00000262215 FLNCQ14315 2725 aa6.24□□□□□ -1.41
ARFGEF1-201ENST00000262215 FRYLO94915 3013 aa6.23□□□□□ -1.41
ARFGEF1-201ENST00000262215 KRTAP13-3Q3SY46 172 aa6.21□□□□□ -1.42
ARFGEF1-201ENST00000262215 DMDP11532 3685 aa6.2□□□□□ -1.42
ARFGEF1-201ENST00000262215 ZZEF1O43149 2961 aa6.15□□□□□ -1.42
ARFGEF1-201ENST00000262215 TENM1Q9UKZ4 2725 aa6.14□□□□□ -1.43
ARFGEF1-201ENST00000262215 TENM3Q9P273 2699 aa6.14□□□□□ -1.43
ARFGEF1-201ENST00000262215 KRTAP15-1Q3LI76 137 aa6.13□□□□□ -1.43
ARFGEF1-201ENST00000262215 DCHS2Q6V1P9 2916 aa6.13□□□□□ -1.43
ARFGEF1-201ENST00000262215 CRCT1Q9UGL9 99 aa6.12□□□□□ -1.43
ARFGEF1-201ENST00000262215 TGP01266 2768 aa6.11□□□□□ -1.43
ARFGEF1-201ENST00000262215 NF1P21359 2839 aa6.09□□□□□ -1.43
ARFGEF1-201ENST00000262215 KRTAP13-4Q3LI77 160 aa6.09□□□□□ -1.43
ARFGEF1-201ENST00000262215 KRTAP12-1P59990 96 aa6.04□□□□□ -1.44
ARFGEF1-201ENST00000262215 NIPBLQ6KC79 2804 aaeCLIP6.04□□□□□ -1.44
ARFGEF1-201ENST00000262215 TENM2Q9NT68 2774 aa6.03□□□□□ -1.44
ARFGEF1-201ENST00000262215 TNRC18O15417 2968 aaPredicted RBP6.02□□□□□ -1.45
ARFGEF1-201ENST00000262215 PDZD2O15018 2839 aa6.01□□□□□ -1.45
ARFGEF1-201ENST00000262215 CELSR1Q9NYQ6 3014 aa5.99□□□□□ -1.45
ARFGEF1-201ENST00000262215 ASPMQ8IZT6 3477 aa5.96□□□□□ -1.45
ARFGEF1-201ENST00000262215 KRTAP21-3Q3LHN1 58 aa5.95□□□□□ -1.46
ARFGEF1-201ENST00000262215 ZANQ9Y493 2812 aa5.95□□□□□ -1.46
ARFGEF1-201ENST00000262215 PKD1L1Q8TDX9 2849 aa5.94□□□□□ -1.46
ARFGEF1-201ENST00000262215 VWFP04275 2813 aa5.92□□□□□ -1.46
ARFGEF1-201ENST00000262215 ZFHX4Q86UP3 3567 aa5.92□□□□□ -1.46
ARFGEF1-201ENST00000262215 DMXL1Q9Y485 3027 aa5.91□□□□□ -1.46
ARFGEF1-201ENST00000262215 KRTAP3-1Q9BYR8 98 aa5.9□□□□□ -1.47
ARFGEF1-201ENST00000262215 FBN2P35556 2912 aa5.9□□□□□ -1.47
ARFGEF1-201ENST00000262215 MUC3AQ02505 3323 aa5.85□□□□□ -1.47
ARFGEF1-201ENST00000262215 SPENQ96T58 3664 aaKnown RBP5.85□□□□□ -1.47
ARFGEF1-201ENST00000262215 LAMA5O15230 3695 aa5.84□□□□□ -1.47
ARFGEF1-201ENST00000262215 HRNRQ86YZ3 2850 aaPredicted RBP5.83□□□□□ -1.48
ARFGEF1-201ENST00000262215 LOC400499M0QZD8 3231 aa5.82□□□□□ -1.48
ARFGEF1-201ENST00000262215 SMG1Q96Q15 3661 aaKnown RBP5.77□□□□□ -1.49
ARFGEF1-201ENST00000262215 KRTAP10-6P60371 365 aaPredicted RBP5.76□□□□□ -1.49
ARFGEF1-201ENST00000262215 BSNQ9UPA5 3926 aa5.75□□□□□ -1.49
ARFGEF1-201ENST00000262215 DCHS1Q96JQ0 3298 aa5.73□□□□□ -1.49
ARFGEF1-201ENST00000262215 SRRM2Q9UQ35 2752 aaKnown RBP5.71□□□□□ -1.5
ARFGEF1-201ENST00000262215 INE1O15225 51 aa5.67□□□□□ -1.5
ARFGEF1-201ENST00000262215 KRTAP10-12P60413 245 aa5.65□□□□□ -1.5
ARFGEF1-201ENST00000262215 CSMD1Q96PZ7 3565 aa5.65□□□□□ -1.51
ARFGEF1-201ENST00000262215 ZFHX3Q15911 3703 aa5.64□□□□□ -1.51
ARFGEF1-201ENST00000262215 MXRA5Q9NR99 2828 aa5.62□□□□□ -1.51
ARFGEF1-201ENST00000262215 RELNP78509 3460 aa5.59□□□□□ -1.51
ARFGEF1-201ENST00000262215 SVEP1Q4LDE5 3571 aa5.56□□□□□ -1.52
ARFGEF1-201ENST00000262215 KRTAP10-5P60370 271 aa5.55□□□□□ -1.52
ARFGEF1-201ENST00000262215 NBPF19A0A087WUL8 3843 aa5.54□□□□□ -1.52
ARFGEF1-201ENST00000262215 KRTAP3-2Q9BYR7 98 aa5.53□□□□□ -1.52
ARFGEF1-201ENST00000262215 VPS13CQ709C8 3753 aa5.52□□□□□ -1.53
ARFGEF1-201ENST00000262215 KRTAP12-3P60328 96 aa5.5□□□□□ -1.53
ARFGEF1-201ENST00000262215 LCE3AQ5TA76 89 aa5.47□□□□□ -1.53
ARFGEF1-201ENST00000262215 KRTAP3-3Q9BYR6 98 aa5.47□□□□□ -1.53
ARFGEF1-201ENST00000262215 MEGF8Q7Z7M0 2845 aa5.44□□□□□ -1.54
ARFGEF1-201ENST00000262215 COL7A1Q02388 2944 aa5.41□□□□□ -1.54
ARFGEF1-201ENST00000262215 CUBNO60494 3623 aa5.4□□□□□ -1.54
ARFGEF1-201ENST00000262215 FBN3Q75N90 2809 aa5.4□□□□□ -1.55
ARFGEF1-201ENST00000262215 FBN1P35555 2871 aaKnown RBP5.32□□□□□ -1.56
ARFGEF1-201ENST00000262215 CSMD2Q7Z408 3487 aa5.31□□□□□ -1.56
ARFGEF1-201ENST00000262215 LORP23490 312 aaPredicted RBP5.3□□□□□ -1.56
ARFGEF1-201ENST00000262215 KRTAP4-5Q9BYR2 181 aa5.3□□□□□ -1.56
ARFGEF1-201ENST00000262215 MT1HL1P0DM35 61 aa5.3□□□□□ -1.56
ARFGEF1-201ENST00000262215 KRTAP8-1Q8IUC2 63 aa5.26□□□□□ -1.57
ARFGEF1-201ENST00000262215 AKAP9Q99996 3911 aa5.25□□□□□ -1.57
ARFGEF1-201ENST00000262215 ZNF469Q96JG9 3925 aaPredicted RBP5.15□□□□□ -1.59
ARFGEF1-201ENST00000262215 OTOGQ6ZRI0 2925 aa5.13□□□□□ -1.59
ARFGEF1-201ENST00000262215 ANK3Q12955 4377 aaKnown RBP5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms