RNA–Protein interactions for RNA: ENST00000200181.7

ITGB4-201, Transcript of integrin subunit beta 4, humanhuman

TSL 1 (best) BASIC

Gene ITGB4, Length 5,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-201ENST00000200181 CELSR3Q9NYQ7 3312 aa8.61□□□□□ -1.03
ITGB4-201ENST00000200181 PRUNE2Q8WUY3 3088 aa8.6□□□□□ -1.03
ITGB4-201ENST00000200181 FREM2Q5SZK8 3169 aa8.59□□□□□ -1.03
ITGB4-201ENST00000200181 TRIOO75962 3097 aa8.58□□□□□ -1.04
ITGB4-201ENST00000200181 APCP25054 2843 aa8.57□□□□□ -1.04
ITGB4-201ENST00000200181 VPS13AQ96RL7 3174 aa8.56□□□□□ -1.04
ITGB4-201ENST00000200181 LAMA1P25391 3075 aa8.56□□□□□ -1.04
ITGB4-201ENST00000200181 FRYQ5TBA9 3013 aa8.54□□□□□ -1.04
ITGB4-201ENST00000200181 KMT2BQ9UMN6 2715 aaPredicted RBP8.54□□□□□ -1.04
ITGB4-201ENST00000200181 USP34Q70CQ2 3546 aa8.53□□□□□ -1.04
ITGB4-201ENST00000200181 KRTAP13-4Q3LI77 160 aa8.53□□□□□ -1.04
ITGB4-201ENST00000200181 TRANK1O15050 2925 aa8.51□□□□□ -1.05
ITGB4-201ENST00000200181 MYO15AQ9UKN7 3530 aa8.5□□□□□ -1.05
ITGB4-201ENST00000200181 NBEAQ8NFP9 2946 aa8.42□□□□□ -1.06
ITGB4-201ENST00000200181 ITPR1Q14643 2758 aa8.41□□□□□ -1.06
ITGB4-201ENST00000200181 KRTAP12-1P59990 96 aa8.4□□□□□ -1.07
ITGB4-201ENST00000200181 WDFY4Q6ZS81 3184 aa8.38□□□□□ -1.07
ITGB4-201ENST00000200181 KALRNO60229 2985 aa8.38□□□□□ -1.07
ITGB4-201ENST00000200181 FRYLO94915 3013 aa8.37□□□□□ -1.07
ITGB4-201ENST00000200181 HIVEP1P15822 2718 aa8.34□□□□□ -1.07
ITGB4-201ENST00000200181 UTP20O75691 2785 aaKnown RBP8.34□□□□□ -1.07
ITGB4-201ENST00000200181 SPTBN5Q9NRC6 3674 aaKnown RBP8.33□□□□□ -1.08
ITGB4-201ENST00000200181 KRTAP15-1Q3LI76 137 aa8.32□□□□□ -1.08
ITGB4-201ENST00000200181 DSPP15924 2871 aaKnown RBP8.3□□□□□ -1.08
ITGB4-201ENST00000200181 ASH1LQ9NR48 2969 aaKnown RBP8.3□□□□□ -1.08
ITGB4-201ENST00000200181 EYSQ5T1H1 3165 aa8.28□□□□□ -1.08
ITGB4-201ENST00000200181 REV3LO60673 3130 aa8.23□□□□□ -1.09
ITGB4-201ENST00000200181 DMXL2Q8TDJ6 3036 aa8.19□□□□□ -1.1
ITGB4-201ENST00000200181 COL6A3P12111 3177 aa8.18□□□□□ -1.1
ITGB4-201ENST00000200181 WDFY3Q8IZQ1 3526 aa8.16□□□□□ -1.1
ITGB4-201ENST00000200181 TACC2O95359 2948 aa8.14□□□□□ -1.11
ITGB4-201ENST00000200181 LRBAP50851 2863 aa8.13□□□□□ -1.11
ITGB4-201ENST00000200181 KRTAP3-1Q9BYR8 98 aa8.13□□□□□ -1.11
ITGB4-201ENST00000200181 TENM4Q6N022 2769 aa8.12□□□□□ -1.11
ITGB4-201ENST00000200181 CRYBG3Q68DQ2 2970 aa8.11□□□□□ -1.11
ITGB4-201ENST00000200181 TGP01266 2768 aa8.09□□□□□ -1.11
ITGB4-201ENST00000200181 INE1O15225 51 aa8.08□□□□□ -1.12
ITGB4-201ENST00000200181 BOD1L1Q8NFC6 3051 aa8.08□□□□□ -1.12
ITGB4-201ENST00000200181 NIPBLQ6KC79 2804 aaeCLIP8.05□□□□□ -1.12
ITGB4-201ENST00000200181 ADGRG4Q8IZF6 3080 aa7.98□□□□□ -1.13
ITGB4-201ENST00000200181 KRTAP10-6P60371 365 aaPredicted RBP7.97□□□□□ -1.13
ITGB4-201ENST00000200181 ATMQ13315 3056 aa7.96□□□□□ -1.13
ITGB4-201ENST00000200181 CELSR2Q9HCU4 2923 aa7.96□□□□□ -1.14
ITGB4-201ENST00000200181 CFAP47Q6ZTR5 3102 aa7.93□□□□□ -1.14
ITGB4-201ENST00000200181 DCHS1Q96JQ0 3298 aa7.92□□□□□ -1.14
ITGB4-201ENST00000200181 LOC400499M0QZD8 3231 aa7.92□□□□□ -1.14
ITGB4-201ENST00000200181 ZFHX4Q86UP3 3567 aa7.92□□□□□ -1.14
ITGB4-201ENST00000200181 COL12A1Q99715 3063 aa7.91□□□□□ -1.14
ITGB4-201ENST00000200181 ZZEF1O43149 2961 aa7.9□□□□□ -1.15
ITGB4-201ENST00000200181 TENM3Q9P273 2699 aa7.89□□□□□ -1.15
ITGB4-201ENST00000200181 TENM1Q9UKZ4 2725 aa7.88□□□□□ -1.15
ITGB4-201ENST00000200181 ASPMQ8IZT6 3477 aa7.86□□□□□ -1.15
ITGB4-201ENST00000200181 FLNCQ14315 2725 aa7.86□□□□□ -1.15
ITGB4-201ENST00000200181 DCHS2Q6V1P9 2916 aa7.86□□□□□ -1.15
ITGB4-201ENST00000200181 CRCT1Q9UGL9 99 aa7.85□□□□□ -1.15
ITGB4-201ENST00000200181 TENM2Q9NT68 2774 aa7.82□□□□□ -1.16
ITGB4-201ENST00000200181 DMDP11532 3685 aa7.77□□□□□ -1.17
ITGB4-201ENST00000200181 KRTAP10-12P60413 245 aa7.77□□□□□ -1.17
ITGB4-201ENST00000200181 CSMD1Q96PZ7 3565 aa7.75□□□□□ -1.17
ITGB4-201ENST00000200181 SMG1Q96Q15 3661 aaKnown RBP7.72□□□□□ -1.17
ITGB4-201ENST00000200181 TNRC18O15417 2968 aaPredicted RBP7.7□□□□□ -1.18
ITGB4-201ENST00000200181 NF1P21359 2839 aa7.69□□□□□ -1.18
ITGB4-201ENST00000200181 LAMA5O15230 3695 aa7.62□□□□□ -1.19
ITGB4-201ENST00000200181 DMXL1Q9Y485 3027 aa7.62□□□□□ -1.19
ITGB4-201ENST00000200181 KRTAP3-2Q9BYR7 98 aa7.62□□□□□ -1.19
ITGB4-201ENST00000200181 PDZD2O15018 2839 aa7.6□□□□□ -1.19
ITGB4-201ENST00000200181 KRTAP12-3P60328 96 aa7.57□□□□□ -1.2
ITGB4-201ENST00000200181 KRTAP3-3Q9BYR6 98 aa7.56□□□□□ -1.2
ITGB4-201ENST00000200181 RELNP78509 3460 aa7.55□□□□□ -1.2
ITGB4-201ENST00000200181 CELSR1Q9NYQ6 3014 aa7.54□□□□□ -1.2
ITGB4-201ENST00000200181 SVEP1Q4LDE5 3571 aa7.53□□□□□ -1.2
ITGB4-201ENST00000200181 ZANQ9Y493 2812 aa7.52□□□□□ -1.2
ITGB4-201ENST00000200181 SPENQ96T58 3664 aaKnown RBP7.5□□□□□ -1.21
ITGB4-201ENST00000200181 MUC3AQ02505 3323 aa7.5□□□□□ -1.21
ITGB4-201ENST00000200181 HRNRQ86YZ3 2850 aaPredicted RBP7.48□□□□□ -1.21
ITGB4-201ENST00000200181 FBN2P35556 2912 aa7.46□□□□□ -1.22
ITGB4-201ENST00000200181 LCE3AQ5TA76 89 aa7.45□□□□□ -1.22
ITGB4-201ENST00000200181 KRTAP23-1A1A580 65 aa7.45□□□□□ -1.22
ITGB4-201ENST00000200181 MT1HL1P0DM35 61 aa7.41□□□□□ -1.22
ITGB4-201ENST00000200181 PKD1L1Q8TDX9 2849 aa7.34□□□□□ -1.23
ITGB4-201ENST00000200181 KRTAP10-5P60370 271 aa7.32□□□□□ -1.24
ITGB4-201ENST00000200181 VWFP04275 2813 aa7.32□□□□□ -1.24
ITGB4-201ENST00000200181 CUBNO60494 3623 aa7.3□□□□□ -1.24
ITGB4-201ENST00000200181 MXRA5Q9NR99 2828 aa7.22□□□□□ -1.25
ITGB4-201ENST00000200181 LORP23490 312 aaPredicted RBP7.16□□□□□ -1.26
ITGB4-201ENST00000200181 KRTAP8-1Q8IUC2 63 aa7.1□□□□□ -1.27
ITGB4-201ENST00000200181 MEGF8Q7Z7M0 2845 aa7.07□□□□□ -1.28
ITGB4-201ENST00000200181 BSNQ9UPA5 3926 aa7.06□□□□□ -1.28
ITGB4-201ENST00000200181 KRTAP10-4P60372 401 aaPredicted RBP7.06□□□□□ -1.28
ITGB4-201ENST00000200181 KRTAP4-5Q9BYR2 181 aa7.04□□□□□ -1.28
ITGB4-201ENST00000200181 FBN3Q75N90 2809 aa7.02□□□□□ -1.29
ITGB4-201ENST00000200181 ZFHX3Q15911 3703 aa7.01□□□□□ -1.29
ITGB4-201ENST00000200181 CSMD2Q7Z408 3487 aa6.96□□□□□ -1.3
ITGB4-201ENST00000200181 SRRM2Q9UQ35 2752 aaKnown RBP6.93□□□□□ -1.3
ITGB4-201ENST00000200181 NBPF19A0A087WUL8 3843 aa6.9□□□□□ -1.31
ITGB4-201ENST00000200181 VPS13CQ709C8 3753 aa6.9□□□□□ -1.31
ITGB4-201ENST00000200181 ANK3Q12955 4377 aaKnown RBP6.83□□□□□ -1.32
ITGB4-201ENST00000200181 COL7A1Q02388 2944 aa6.81□□□□□ -1.32
ITGB4-201ENST00000200181 HUWE1Q7Z6Z7 4374 aaKnown RBP6.69□□□□□ -1.34
ITGB4-201ENST00000200181 ALMS1Q8TCU4 4167 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms