RNA–Protein interactions for RNA: ENSMUST00000160721.7

Pcdh1-203, Transcript of Protocadherin 1 (Fragment), mousemouse

TSL 5 BASIC

Gene Pcdh1, Length 5,416 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-203ENSMUST00000160721 Ighv3-8A0A075B5T0 131 aa12.96□□□□□ -0.33
Pcdh1-203ENSMUST00000160721 Trav9d-1A0A075B699 112 aa12.96□□□□□ -0.33
Pcdh1-203ENSMUST00000160721 Gm94Q3V2D2 93 aa12.96□□□□□ -0.33
Pcdh1-203ENSMUST00000160721 EpopQ7TNS8 369 aa12.96□□□□□ -0.33
Pcdh1-203ENSMUST00000160721 P01790 122 aa12.96□□□□□ -0.33
Pcdh1-203ENSMUST00000160721 Pear1Q8VIK5 1034 aa12.96□□□□□ -0.33
Pcdh1-203ENSMUST00000160721 AtrxQ61687 2476 aaKnown RBP12.96□□□□□ -0.33
Pcdh1-203ENSMUST00000160721 Sfta2E9PXB6 77 aa12.96□□□□□ -0.33
Pcdh1-203ENSMUST00000160721 Gm5105Q8C6Y9 112 aa12.96□□□□□ -0.33
Pcdh1-203ENSMUST00000160721 TdhQ8K3F7 373 aa12.96□□□□□ -0.33
Pcdh1-203ENSMUST00000160721 Trav7-1A0A0G2JEV5 112 aa12.96□□□□□ -0.34
Pcdh1-203ENSMUST00000160721 Hbb-bsA8DUK4 147 aa12.96□□□□□ -0.34
Pcdh1-203ENSMUST00000160721 Hbb-b1P02088 147 aa12.96□□□□□ -0.34
Pcdh1-203ENSMUST00000160721 P18528 98 aa12.96□□□□□ -0.34
Pcdh1-203ENSMUST00000160721 Cysltr1Q99JA4 352 aa12.96□□□□□ -0.34
Pcdh1-203ENSMUST00000160721 Mapk1ip1Q9D7G9 263 aa12.96□□□□□ -0.34
Pcdh1-203ENSMUST00000160721 AvpP35455 168 aa12.95□□□□□ -0.34
Pcdh1-203ENSMUST00000160721 Zcwpw2Q08EN7 125 aa12.95□□□□□ -0.34
Pcdh1-203ENSMUST00000160721 Samd13D3YUG0 102 aa12.95□□□□□ -0.34
Pcdh1-203ENSMUST00000160721 Nr2c2apQ3TV70 140 aa12.95□□□□□ -0.34
Pcdh1-203ENSMUST00000160721 Spsb3Q571F5 354 aa12.95□□□□□ -0.34
Pcdh1-203ENSMUST00000160721 Dock9Q8BIK4 2055 aa12.95□□□□□ -0.34
Pcdh1-203ENSMUST00000160721 Igkv4-63A0A0G2JFU6 117 aa12.95□□□□□ -0.34
Pcdh1-203ENSMUST00000160721 MsmbO08540 113 aa12.95□□□□□ -0.34
Pcdh1-203ENSMUST00000160721 MycbQ6P8Z1 170 aa12.95□□□□□ -0.34
Pcdh1-203ENSMUST00000160721 Cend1Q9JKC6 149 aa12.95□□□□□ -0.34
Pcdh1-203ENSMUST00000160721 Defb30Q30KN4 75 aa12.95□□□□□ -0.34
Pcdh1-203ENSMUST00000160721 Ighv1-49A0A0A6YWX2 117 aa12.95□□□□□ -0.34
Pcdh1-203ENSMUST00000160721 SeboxP70368 190 aa12.95□□□□□ -0.34
Pcdh1-203ENSMUST00000160721 Tmem190Q9D2E9 166 aa12.95□□□□□ -0.34
Pcdh1-203ENSMUST00000160721 Med12lQ8BQM9 2157 aa12.94□□□□□ -0.34
Pcdh1-203ENSMUST00000160721 Igkv6-15A0A140T8M5 115 aa12.94□□□□□ -0.34
Pcdh1-203ENSMUST00000160721 Igkv14-111A0A140T8P9 117 aa12.94□□□□□ -0.34
Pcdh1-203ENSMUST00000160721 Gm10384Q3UQ87 92 aa12.94□□□□□ -0.34
Pcdh1-203ENSMUST00000160721 Gm27027S4R1M6 97 aa12.94□□□□□ -0.34
Pcdh1-203ENSMUST00000160721 Gm6040Q4QY32 63 aa12.94□□□□□ -0.34
Pcdh1-203ENSMUST00000160721 C1qtnf5Q8K479 243 aa12.94□□□□□ -0.34
Pcdh1-203ENSMUST00000160721 1500009C09RikD3YYW9 81 aa12.94□□□□□ -0.34
Pcdh1-203ENSMUST00000160721 MdfiP70331 251 aa12.94□□□□□ -0.34
Pcdh1-203ENSMUST00000160721 Psg25Q497W1 475 aa12.94□□□□□ -0.34
Pcdh1-203ENSMUST00000160721 Znrd1Q791N7 123 aa12.94□□□□□ -0.34
Pcdh1-203ENSMUST00000160721 Timm21Q8CCM6 249 aa12.94□□□□□ -0.34
Pcdh1-203ENSMUST00000160721 Tomm40Q9QYA2 361 aa12.94□□□□□ -0.34
Pcdh1-203ENSMUST00000160721 Clec5aQ9R007 190 aa12.94□□□□□ -0.34
Pcdh1-203ENSMUST00000160721 Ovol1Q9WTJ2 267 aa12.94□□□□□ -0.34
Pcdh1-203ENSMUST00000160721 Chd8Q09XV5 2582 aaKnown RBP12.93□□□□□ -0.34
Pcdh1-203ENSMUST00000160721 Gm10521E9PZK0 135 aa12.93□□□□□ -0.34
Pcdh1-203ENSMUST00000160721 Ca5aP23589 299 aa12.93□□□□□ -0.34
Pcdh1-203ENSMUST00000160721 Trbv3A0A0A6YYE2 117 aa12.93□□□□□ -0.34
Pcdh1-203ENSMUST00000160721 MalO09198 153 aa12.93□□□□□ -0.34
Pcdh1-203ENSMUST00000160721 Ly6c1P0CW02 131 aa12.93□□□□□ -0.34
Pcdh1-203ENSMUST00000160721 Exph5Q0VAV2 1960 aa12.93□□□□□ -0.34
Pcdh1-203ENSMUST00000160721 Trav3-4A0A075B654 114 aa12.93□□□□□ -0.34
Pcdh1-203ENSMUST00000160721 Trbv30A0A0B4J1P1 111 aa12.93□□□□□ -0.34
Pcdh1-203ENSMUST00000160721 Gm7102J3QQ10 178 aa12.93□□□□□ -0.34
Pcdh1-203ENSMUST00000160721 Gm10447Q3UQ92 135 aa12.93□□□□□ -0.34
Pcdh1-203ENSMUST00000160721 Lypd1Q8BLC3 141 aa12.93□□□□□ -0.34
Pcdh1-203ENSMUST00000160721 Gm4763Q8CFJ5 196 aa12.93□□□□□ -0.34
Pcdh1-203ENSMUST00000160721 Lrrk1Q3UHC2 2014 aa12.93□□□□□ -0.34
Pcdh1-203ENSMUST00000160721 Ighv1-18A0A0A6YXN4 117 aa12.92□□□□□ -0.34
Pcdh1-203ENSMUST00000160721 9430097D07RikQ8BS47 195 aa12.92□□□□□ -0.34
Pcdh1-203ENSMUST00000160721 Rpp25lQ99JH1 163 aa12.92□□□□□ -0.34
Pcdh1-203ENSMUST00000160721 Ankrd39Q9D2X0 183 aa12.92□□□□□ -0.34
Pcdh1-203ENSMUST00000160721 Trav6-4A0A075B6B4 115 aa12.92□□□□□ -0.34
Pcdh1-203ENSMUST00000160721 Tcrg-C3L7N479 172 aa12.92□□□□□ -0.34
Pcdh1-203ENSMUST00000160721 P03985 172 aa12.92□□□□□ -0.34
Pcdh1-203ENSMUST00000160721 Usmg5Q78IK2 58 aa12.92□□□□□ -0.34
Pcdh1-203ENSMUST00000160721 Pfn1P62962 140 aa12.92□□□□□ -0.34
Pcdh1-203ENSMUST00000160721 Vdac2Q60930 295 aaKnown RBP12.92□□□□□ -0.34
Pcdh1-203ENSMUST00000160721 Myod1P10085 318 aa12.91□□□□□ -0.34
Pcdh1-203ENSMUST00000160721 Igkv4-80A0A075B5L7 116 aa12.91□□□□□ -0.34
Pcdh1-203ENSMUST00000160721 Brd3osA0A1B0GRB6 84 aa12.91□□□□□ -0.34
Pcdh1-203ENSMUST00000160721 LenepQ9WVB6 61 aa12.91□□□□□ -0.34
Pcdh1-203ENSMUST00000160721 Igkv4-62A0A0G2JDW9 117 aa12.91□□□□□ -0.34
Pcdh1-203ENSMUST00000160721 F930015N05RikQ8C3A3 210 aa12.9□□□□□ -0.34
Pcdh1-203ENSMUST00000160721 Gm6793B2RXM2 351 aa12.9□□□□□ -0.34
Pcdh1-203ENSMUST00000160721 SpinklQ8CEK3 90 aa12.9□□□□□ -0.34
Pcdh1-203ENSMUST00000160721 Dpm2Q9Z324 84 aa12.9□□□□□ -0.34
Pcdh1-203ENSMUST00000160721 Gm10192Q3V0S1 108 aa12.9□□□□□ -0.35
Pcdh1-203ENSMUST00000160721 Card19Q9D1I2 183 aa12.9□□□□□ -0.35
Pcdh1-203ENSMUST00000160721 Nlrc5C3VPR6 1915 aa12.9□□□□□ -0.35
Pcdh1-203ENSMUST00000160721 Plekhb2Q9QZC7 221 aa12.89□□□□□ -0.35
Pcdh1-203ENSMUST00000160721 Gm9513B3GLJ6 99 aa12.89□□□□□ -0.35
Pcdh1-203ENSMUST00000160721 BC035044E0CXF8 138 aa12.89□□□□□ -0.35
Pcdh1-203ENSMUST00000160721 CntfrO88507 372 aa12.89□□□□□ -0.35
Pcdh1-203ENSMUST00000160721 Gm16686Q3UMN9 131 aa12.89□□□□□ -0.35
Pcdh1-203ENSMUST00000160721 Mtatp8P03930 67 aa12.89□□□□□ -0.35
Pcdh1-203ENSMUST00000160721 Sap30O88574 220 aa12.89□□□□□ -0.35
Pcdh1-203ENSMUST00000160721 P01896 185 aa12.89□□□□□ -0.35
Pcdh1-203ENSMUST00000160721 Rpl36aP83882 106 aaKnown RBP12.89□□□□□ -0.35
Pcdh1-203ENSMUST00000160721 Ang6Q5GAN0 147 aa12.89□□□□□ -0.35
Pcdh1-203ENSMUST00000160721 Supt4h1bQ9Z199 117 aa12.89□□□□□ -0.35
Pcdh1-203ENSMUST00000160721 Cspg4Q8VHY0 2327 aa12.89□□□□□ -0.35
Pcdh1-203ENSMUST00000160721 Wnk1P83741 2377 aa12.88□□□□□ -0.35
Pcdh1-203ENSMUST00000160721 P01660 111 aa12.88□□□□□ -0.35
Pcdh1-203ENSMUST00000160721 Trav2Q5R1I9 109 aa12.88□□□□□ -0.35
Pcdh1-203ENSMUST00000160721 Pradc1Q9D9N8 188 aa12.88□□□□□ -0.35
Pcdh1-203ENSMUST00000160721 Mapk1ip1lQ8BH93 242 aa12.88□□□□□ -0.35
Pcdh1-203ENSMUST00000160721 PpbpQ9EQI5 113 aa12.88□□□□□ -0.35
Pcdh1-203ENSMUST00000160721 Sdk2Q6V4S5 2176 aa12.87□□□□□ -0.35
Retrieved 100 of 22,080 RNA–protein pairs in 38.8 ms