RNA–Protein interactions for RNA: ENSMUST00000022220.12

Msh3-201, Transcript of DNA mismatch repair protein Msh3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Msh3, Length 3,937 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-201ENSMUST00000022220 Gm2174F6ZVF2 133 aa8.7□□□□□ -1.02
Msh3-201ENSMUST00000022220 Gsx1P31315 261 aa8.7□□□□□ -1.02
Msh3-201ENSMUST00000022220 Reg1P43137 165 aa8.7□□□□□ -1.02
Msh3-201ENSMUST00000022220 RhogP84096 191 aa8.7□□□□□ -1.02
Msh3-201ENSMUST00000022220 Errfi1Q99JZ7 461 aa8.7□□□□□ -1.02
Msh3-201ENSMUST00000022220 Tmem160Q9D938 188 aa8.7□□□□□ -1.02
Msh3-201ENSMUST00000022220 Trav6n-6A0A075B6B2 114 aa8.7□□□□□ -1.02
Msh3-201ENSMUST00000022220 Sap30O88574 220 aa8.7□□□□□ -1.02
Msh3-201ENSMUST00000022220 Bhlha15Q9QYC3 197 aa8.7□□□□□ -1.02
Msh3-201ENSMUST00000022220 PolqQ8CGS6 2544 aa8.7□□□□□ -1.02
Msh3-201ENSMUST00000022220 FryE9Q8I9 3020 aa8.69□□□□□ -1.02
Msh3-201ENSMUST00000022220 Gm6525A0A0A6YW33 106 aa8.69□□□□□ -1.02
Msh3-201ENSMUST00000022220 Gm36368A0A1D5RLK8 91 aa8.69□□□□□ -1.02
Msh3-201ENSMUST00000022220 P01896 185 aa8.69□□□□□ -1.02
Msh3-201ENSMUST00000022220 P03980 138 aa8.69□□□□□ -1.02
Msh3-201ENSMUST00000022220 Q08AU9 97 aa8.69□□□□□ -1.02
Msh3-201ENSMUST00000022220 Spata46Q4FZF2 204 aa8.69□□□□□ -1.02
Msh3-201ENSMUST00000022220 Slamf6Q9ET39 351 aa8.69□□□□□ -1.02
Msh3-201ENSMUST00000022220 Osr1Q9WVG7 266 aa8.69□□□□□ -1.02
Msh3-201ENSMUST00000022220 Ighv1-20A0A0A6YX66 117 aa8.69□□□□□ -1.02
Msh3-201ENSMUST00000022220 Gm6899Q3USS0 134 aa8.69□□□□□ -1.02
Msh3-201ENSMUST00000022220 Tpsg1Q9QUL7 311 aa8.69□□□□□ -1.02
Msh3-201ENSMUST00000022220 Trav6-6A0A075B603 114 aa8.69□□□□□ -1.02
Msh3-201ENSMUST00000022220 Tmem95P0DJF3 176 aa8.69□□□□□ -1.02
Msh3-201ENSMUST00000022220 Rps20P60867 119 aaKnown RBP8.69□□□□□ -1.02
Msh3-201ENSMUST00000022220 Cks1brtQ3UNC9 96 aa8.69□□□□□ -1.02
Msh3-201ENSMUST00000022220 Ndufs8Q8K3J1 212 aa8.69□□□□□ -1.02
Msh3-201ENSMUST00000022220 Ormdl3Q9CPZ6 153 aa8.69□□□□□ -1.02
Msh3-201ENSMUST00000022220 Klf13Q9JJZ6 289 aa8.69□□□□□ -1.02
Msh3-201ENSMUST00000022220 Prrc2cQ3TLH4 2846 aaKnown RBP8.69□□□□□ -1.02
Msh3-201ENSMUST00000022220 Ighv6-7A0A0A6YWU3 119 aa8.68□□□□□ -1.02
Msh3-201ENSMUST00000022220 Ly6lH3BJG9 140 aa8.68□□□□□ -1.02
Msh3-201ENSMUST00000022220 Tac3P55099 116 aa8.68□□□□□ -1.02
Msh3-201ENSMUST00000022220 Gm11733Q8BQP1 125 aa8.68□□□□□ -1.02
Msh3-201ENSMUST00000022220 Vmn1r63Q9EPT1 300 aa8.68□□□□□ -1.02
Msh3-201ENSMUST00000022220 Trbv14A0A140T8L9 115 aa8.68□□□□□ -1.02
Msh3-201ENSMUST00000022220 Loxl2P58022 776 aa8.68□□□□□ -1.02
Msh3-201ENSMUST00000022220 Gm7489Q3UT34 171 aa8.68□□□□□ -1.02
Msh3-201ENSMUST00000022220 Tmem52Q9D702 196 aa8.68□□□□□ -1.02
Msh3-201ENSMUST00000022220 Taf15Q8BQ46 557 aaKnown RBP8.68□□□□□ -1.02
Msh3-201ENSMUST00000022220 Wisp2Q9Z0G4 251 aa8.68□□□□□ -1.02
Msh3-201ENSMUST00000022220 Trav21-dv12A0A075B6C4 109 aa8.67□□□□□ -1.02
Msh3-201ENSMUST00000022220 Olfr873Q8VFJ0 319 aa8.67□□□□□ -1.02
Msh3-201ENSMUST00000022220 Rabac1Q9Z0S9 185 aa8.67□□□□□ -1.02
Msh3-201ENSMUST00000022220 Gm9970F6ZED4 185 aa8.67□□□□□ -1.02
Msh3-201ENSMUST00000022220 F930015N05RikQ8C3A3 210 aa8.67□□□□□ -1.02
Msh3-201ENSMUST00000022220 Parm1Q923D3 296 aa8.67□□□□□ -1.02
Msh3-201ENSMUST00000022220 Card19Q9D1I2 183 aa8.67□□□□□ -1.02
Msh3-201ENSMUST00000022220 Gm28269A0A087WSG3 125 aa8.67□□□□□ -1.02
Msh3-201ENSMUST00000022220 Cela2aP05208 271 aa8.67□□□□□ -1.02
Msh3-201ENSMUST00000022220 Cks1bP61025 79 aa8.67□□□□□ -1.02
Msh3-201ENSMUST00000022220 Defb30Q30KN4 75 aa8.67□□□□□ -1.02
Msh3-201ENSMUST00000022220 Ccl12Q62401 104 aa8.67□□□□□ -1.02
Msh3-201ENSMUST00000022220 Olfr365Q8VFT2 312 aa8.67□□□□□ -1.02
Msh3-201ENSMUST00000022220 GrhprQ91Z53 328 aa8.67□□□□□ -1.02
Msh3-201ENSMUST00000022220 Hectd1Q69ZR2 2618 aaKnown RBP8.66□□□□□ -1.02
Msh3-201ENSMUST00000022220 P01792 123 aa8.66□□□□□ -1.02
Msh3-201ENSMUST00000022220 Sox21Q811W0 276 aa8.66□□□□□ -1.02
Msh3-201ENSMUST00000022220 Pf4Q9Z126 105 aa8.66□□□□□ -1.02
Msh3-201ENSMUST00000022220 Tcrg-V6A0A075B5Y8 134 aa8.66□□□□□ -1.02
Msh3-201ENSMUST00000022220 SbpP15501 199 aa8.66□□□□□ -1.02
Msh3-201ENSMUST00000022220 Hint1P70349 126 aaKnown RBP8.66□□□□□ -1.02
Msh3-201ENSMUST00000022220 Tmem88bQ3TYP4 173 aa8.66□□□□□ -1.02
Msh3-201ENSMUST00000022220 PgpQ8CHP8 321 aa8.66□□□□□ -1.02
Msh3-201ENSMUST00000022220 Ly6g5bQ8K1T4 194 aa8.66□□□□□ -1.02
Msh3-201ENSMUST00000022220 Dynlrb2Q9DAJ5 96 aa8.66□□□□□ -1.02
Msh3-201ENSMUST00000022220 Gm5150Q1AN92 299 aa8.66□□□□□ -1.02
Msh3-201ENSMUST00000022220 9130213A22RikQ3V3T2 120 aa8.66□□□□□ -1.02
Msh3-201ENSMUST00000022220 Gm17334Q8C6U3 126 aa8.66□□□□□ -1.02
Msh3-201ENSMUST00000022220 Dkk2Q9QYZ8 259 aa8.66□□□□□ -1.02
Msh3-201ENSMUST00000022220 Ighv3-4A0A0A6YXF1 117 aa8.65□□□□□ -1.02
Msh3-201ENSMUST00000022220 Gm45753A0A1C7CYU8 86 aa8.65□□□□□ -1.02
Msh3-201ENSMUST00000022220 S100a4P07091 101 aa8.65□□□□□ -1.02
Msh3-201ENSMUST00000022220 Gm10188Q3V432 135 aa8.65□□□□□ -1.02
Msh3-201ENSMUST00000022220 Anapc13Q8R034 74 aa8.65□□□□□ -1.02
Msh3-201ENSMUST00000022220 Hrct1Q9D6B9 109 aa8.65□□□□□ -1.02
Msh3-201ENSMUST00000022220 Slc25a39Q9D8K8 359 aa8.65□□□□□ -1.02
Msh3-201ENSMUST00000022220 Cep192E9Q4Y4 2514 aaKnown RBP8.65□□□□□ -1.02
Msh3-201ENSMUST00000022220 Trav8-1A0A075B641 109 aa8.65□□□□□ -1.02
Msh3-201ENSMUST00000022220 Gm20379A0A087WR34 119 aa8.65□□□□□ -1.02
Msh3-201ENSMUST00000022220 Thy1P01831 162 aa8.65□□□□□ -1.02
Msh3-201ENSMUST00000022220 Il22ra1Q80XZ4 581 aa8.65□□□□□ -1.02
Msh3-201ENSMUST00000022220 Gm9944Q8C559 102 aa8.65□□□□□ -1.02
Msh3-201ENSMUST00000022220 Ighv1-69A0A0G2JFS5 117 aa8.65□□□□□ -1.03
Msh3-201ENSMUST00000022220 Tmem40Q4FJU9 225 aa8.65□□□□□ -1.03
Msh3-201ENSMUST00000022220 Crybb3Q9JJU9 211 aa8.65□□□□□ -1.03
Msh3-201ENSMUST00000022220 Ramp1Q9WTJ5 148 aa8.65□□□□□ -1.03
Msh3-201ENSMUST00000022220 Wdfy4E9Q2M9 3149 aa8.65□□□□□ -1.03
Msh3-201ENSMUST00000022220 Ighv1-19A0A0A6YWX0 117 aa8.64□□□□□ -1.03
Msh3-201ENSMUST00000022220 Gm21983D6RFS9 131 aa8.64□□□□□ -1.03
Msh3-201ENSMUST00000022220 Gm6871L7N248 545 aa8.64□□□□□ -1.03
Msh3-201ENSMUST00000022220 Sigmar1O55242 223 aa8.64□□□□□ -1.03
Msh3-201ENSMUST00000022220 Cd69P37217 199 aa8.64□□□□□ -1.03
Msh3-201ENSMUST00000022220 Gng4P50153 75 aa8.64□□□□□ -1.03
Msh3-201ENSMUST00000022220 NpyP57774 97 aa8.64□□□□□ -1.03
Msh3-201ENSMUST00000022220 Dlx6P70397 175 aa8.64□□□□□ -1.03
Msh3-201ENSMUST00000022220 Rbmxl2Q9DAE2 385 aaKnown RBP8.64□□□□□ -1.03
Msh3-201ENSMUST00000022220 4933414I15RikQ9D4D5 133 aa8.64□□□□□ -1.03
Msh3-201ENSMUST00000022220 Lyrm7Q9DA03 104 aa8.64□□□□□ -1.03
Msh3-201ENSMUST00000022220 Dmxl2Q8BPN8 3032 aa8.64□□□□□ -1.03
Retrieved 100 of 22,080 RNA–protein pairs in 34.5 ms