RNA–Protein interactions for RNA: ENST00000559858.5

ZEB1-217, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 2,745 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-217ENST00000559858 LINC01556Q5JQF7 62 aa4.15□□□□□ -1.74
ZEB1-217ENST00000559858 CHD8Q9HCK8 2581 aa4.15□□□□□ -1.74
ZEB1-217ENST00000559858 MMP24-AS1A0A0U1RRL7 71 aa4.15□□□□□ -1.75
ZEB1-217ENST00000559858 HRES1P13985 223 aa4.15□□□□□ -1.75
ZEB1-217ENST00000559858 H0Y9J4 135 aa4.14□□□□□ -1.75
ZEB1-217ENST00000559858 FLNCQ14315 2725 aa4.14□□□□□ -1.75
ZEB1-217ENST00000559858 ACACBO00763 2458 aa4.14□□□□□ -1.75
ZEB1-217ENST00000559858 PLA2G1BP04054 148 aaKnown RBP4.14□□□□□ -1.75
ZEB1-217ENST00000559858 PRAC1Q96KF2 57 aa4.14□□□□□ -1.75
ZEB1-217ENST00000559858 ASB16-AS1Q495Z4 193 aa4.13□□□□□ -1.75
ZEB1-217ENST00000559858 LINC01554Q52M75 96 aa4.13□□□□□ -1.75
ZEB1-217ENST00000559858 KRTAP1-3Q8IUG1 177 aa4.13□□□□□ -1.75
ZEB1-217ENST00000559858 Q6ZR54 194 aa4.13□□□□□ -1.75
ZEB1-217ENST00000559858 PKD1L2Q7Z442 2459 aa4.12□□□□□ -1.75
ZEB1-217ENST00000559858 DEFB131BA0A096LNP1 70 aa4.12□□□□□ -1.75
ZEB1-217ENST00000559858 H3BS24 57 aa4.12□□□□□ -1.75
ZEB1-217ENST00000559858 KRTAP10-3P60369 221 aa4.12□□□□□ -1.75
ZEB1-217ENST00000559858 IGKV2-24A0A0C4DH68 120 aa4.11□□□□□ -1.75
ZEB1-217ENST00000559858 PRLHP81277 87 aa4.11□□□□□ -1.75
ZEB1-217ENST00000559858 FAM208BQ5VWN6 2430 aa4.11□□□□□ -1.75
ZEB1-217ENST00000559858 A0A087X002 238 aa4.11□□□□□ -1.75
ZEB1-217ENST00000559858 F8P00451 2351 aa4.11□□□□□ -1.75
ZEB1-217ENST00000559858 CENPEQ02224 2701 aa4.1□□□□□ -1.75
ZEB1-217ENST00000559858 SPRR1BP22528 89 aa4.1□□□□□ -1.75
ZEB1-217ENST00000559858 DNAH10OSP0CZ25 163 aa4.09□□□□□ -1.75
ZEB1-217ENST00000559858 ABCA12Q86UK0 2595 aa4.09□□□□□ -1.75
ZEB1-217ENST00000559858 CCDC168Q8NDH2 2452 aa4.09□□□□□ -1.76
ZEB1-217ENST00000559858 MYO18BQ8IUG5 2567 aa4.09□□□□□ -1.76
ZEB1-217ENST00000559858 ADM2Q7Z4H4 148 aa4.08□□□□□ -1.76
ZEB1-217ENST00000559858 UNC79Q9P2D8 2635 aa4.08□□□□□ -1.76
ZEB1-217ENST00000559858 PRR26Q8N8Z3 221 aa4.08□□□□□ -1.76
ZEB1-217ENST00000559858 C8orf17Q9NRJ1 99 aa4.08□□□□□ -1.76
ZEB1-217ENST00000559858 SPTBN4Q9H254 2564 aa4.08□□□□□ -1.76
ZEB1-217ENST00000559858 ITPR3Q14573 2671 aa4.07□□□□□ -1.76
ZEB1-217ENST00000559858 CASC10Q5T4H9 136 aa4.07□□□□□ -1.76
ZEB1-217ENST00000559858 MTORP42345 2549 aa4.07□□□□□ -1.76
ZEB1-217ENST00000559858 RTL8CO15255 209 aa4.06□□□□□ -1.76
ZEB1-217ENST00000559858 KRTAP1-1Q07627 177 aa4.06□□□□□ -1.76
ZEB1-217ENST00000559858 MDFIQ99750 246 aa4.06□□□□□ -1.76
ZEB1-217ENST00000559858 ACYP2P14621 99 aa4.05□□□□□ -1.76
ZEB1-217ENST00000559858 SPATA8Q6RVD6 105 aa4.05□□□□□ -1.76
ZEB1-217ENST00000559858 Q96NJ1 140 aa4.05□□□□□ -1.76
ZEB1-217ENST00000559858 A0A096LNI7 61 aa4.04□□□□□ -1.76
ZEB1-217ENST00000559858 MRPL34Q9BQ48 92 aaKnown RBP4.04□□□□□ -1.76
ZEB1-217ENST00000559858 OTOGQ6ZRI0 2925 aa4.04□□□□□ -1.76
ZEB1-217ENST00000559858 FLNAP21333 2647 aaKnown RBP4.04□□□□□ -1.76
ZEB1-217ENST00000559858 A0A1B0GVX0 72 aa4.03□□□□□ -1.76
ZEB1-217ENST00000559858 CACNA1AO00555 2505 aa4.03□□□□□ -1.76
ZEB1-217ENST00000559858 IGHV6-1A0A0B4J1U7 121 aa4.03□□□□□ -1.76
ZEB1-217ENST00000559858 ANK3Q12955 4377 aaKnown RBP4.02□□□□□ -1.77
ZEB1-217ENST00000559858 A0A1B0GU69 56 aa4.02□□□□□ -1.77
ZEB1-217ENST00000559858 CDK2AP2O75956 126 aa4.02□□□□□ -1.77
ZEB1-217ENST00000559858 HIVEP1P15822 2718 aa4.02□□□□□ -1.77
ZEB1-217ENST00000559858 RETNLBQ9BQ08 111 aa4.01□□□□□ -1.77
ZEB1-217ENST00000559858 PIEZO1Q92508 2521 aa4.01□□□□□ -1.77
ZEB1-217ENST00000559858 ZNF469Q96JG9 3925 aaPredicted RBP4.01□□□□□ -1.77
ZEB1-217ENST00000559858 MIR22HGQ0VDD5 57 aa4.01□□□□□ -1.77
ZEB1-217ENST00000559858 TENM2Q9NT68 2774 aa4.01□□□□□ -1.77
ZEB1-217ENST00000559858 ACANP16112 2415 aa4□□□□□ -1.77
ZEB1-217ENST00000559858 VWFP04275 2813 aa4□□□□□ -1.77
ZEB1-217ENST00000559858 IGSF10Q6WRI0 2623 aa4□□□□□ -1.77
ZEB1-217ENST00000559858 LCE2BO14633 110 aa4□□□□□ -1.77
ZEB1-217ENST00000559858 UQCR11O14957 56 aa4□□□□□ -1.77
ZEB1-217ENST00000559858 CSAG1Q6PB30 78 aa4□□□□□ -1.77
ZEB1-217ENST00000559858 KRTAP11-1Q8IUC1 163 aa4□□□□□ -1.77
ZEB1-217ENST00000559858 DMAC1Q96GE9 116 aa3.99□□□□□ -1.77
ZEB1-217ENST00000559858 ALMS1Q8TCU4 4167 aa3.98□□□□□ -1.77
ZEB1-217ENST00000559858 K7EIL1 84 aa3.98□□□□□ -1.77
ZEB1-217ENST00000559858 IGLV9-49A0A0B4J1Y8 123 aa3.97□□□□□ -1.77
ZEB1-217ENST00000559858 KRTAP13-3Q3SY46 172 aa3.97□□□□□ -1.77
ZEB1-217ENST00000559858 Q5W150 140 aa3.97□□□□□ -1.77
ZEB1-217ENST00000559858 PKD1L1Q8TDX9 2849 aa3.97□□□□□ -1.77
ZEB1-217ENST00000559858 ZNF462Q96JM2 2506 aa3.96□□□□□ -1.77
ZEB1-217ENST00000559858 NOTCH2NLQ7Z3S9 236 aa3.96□□□□□ -1.78
ZEB1-217ENST00000559858 BAHCC1Q9P281 2608 aa3.96□□□□□ -1.78
ZEB1-217ENST00000559858 CHTF8P0CG12 524 aa3.95□□□□□ -1.78
ZEB1-217ENST00000559858 KRTAP13-1Q8IUC0 172 aa3.95□□□□□ -1.78
ZEB1-217ENST00000559858 SRRM2Q9UQ35 2752 aaKnown RBP3.95□□□□□ -1.78
ZEB1-217ENST00000559858 NOTCH2Q04721 2471 aa3.94□□□□□ -1.78
ZEB1-217ENST00000559858 ZNF861PO60384 105 aa3.93□□□□□ -1.78
ZEB1-217ENST00000559858 UBR5O95071 2799 aaPredicted RBP3.93□□□□□ -1.78
ZEB1-217ENST00000559858 C14orf177Q52M58 125 aa3.93□□□□□ -1.78
ZEB1-217ENST00000559858 LINC00483Q53H64 154 aa3.93□□□□□ -1.78
ZEB1-217ENST00000559858 KRTAP10-11P60412 298 aa3.92□□□□□ -1.78
ZEB1-217ENST00000559858 SMR3AQ99954 134 aa3.92□□□□□ -1.78
ZEB1-217ENST00000559858 C1orf134Q5TEV5 83 aa3.91□□□□□ -1.78
ZEB1-217ENST00000559858 ZNF706Q9Y5V0 76 aaPredicted RBP3.91□□□□□ -1.78
ZEB1-217ENST00000559858 TEP1Q99973 2627 aaKnown RBP3.9□□□□□ -1.79
ZEB1-217ENST00000559858 FAM229AH3BQW9 127 aa3.9□□□□□ -1.79
ZEB1-217ENST00000559858 WWC2-AS2Q96NR7 200 aa3.9□□□□□ -1.79
ZEB1-217ENST00000559858 DNAH1Q9P2D7 4330 aa3.89□□□□□ -1.79
ZEB1-217ENST00000559858 TENM3Q9P273 2699 aa3.89□□□□□ -1.79
ZEB1-217ENST00000559858 SPINK6Q6UWN8 80 aa3.89□□□□□ -1.79
ZEB1-217ENST00000559858 IGLV7-43P04211 117 aa3.88□□□□□ -1.79
ZEB1-217ENST00000559858 IGKV2-30P06310 120 aa3.88□□□□□ -1.79
ZEB1-217ENST00000559858 LCE2CQ5TA81 110 aa3.88□□□□□ -1.79
ZEB1-217ENST00000559858 TENM1Q9UKZ4 2725 aa3.87□□□□□ -1.79
ZEB1-217ENST00000559858 KRTAP1-5Q9BYS1 174 aa3.87□□□□□ -1.79
ZEB1-217ENST00000559858 PDZD2O15018 2839 aa3.87□□□□□ -1.79
ZEB1-217ENST00000559858 KRTAP25-1Q3LHN0 102 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 100.9 ms