RNA–Protein interactions for RNA: ENST00000531513.5

USP47-211, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 936 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-211ENST00000531513 GVINP1Q7Z2Y8 2422 aa0.48□□□□□ -2.33
USP47-211ENST00000531513 DSTQ03001 7570 aaKnown RBP0.48□□□□□ -2.33
USP47-211ENST00000531513 IGIPA6NJ69 53 aa0.48□□□□□ -2.33
USP47-211ENST00000531513 VWFP04275 2813 aa0.48□□□□□ -2.33
USP47-211ENST00000531513 SYCP2Q9BX26 1530 aa0.48□□□□□ -2.33
USP47-211ENST00000531513 C6orf48Q9UBA6 75 aa0.47□□□□□ -2.33
USP47-211ENST00000531513 UGGT1Q9NYU2 1555 aa0.47□□□□□ -2.33
USP47-211ENST00000531513 MDN1Q9NU22 5596 aa0.47□□□□□ -2.33
USP47-211ENST00000531513 WNK2Q9Y3S1 2297 aa0.47□□□□□ -2.33
USP47-211ENST00000531513 PHGR1C9JFL3 82 aa0.46□□□□□ -2.34
USP47-211ENST00000531513 PRM1P04553 51 aa0.46□□□□□ -2.34
USP47-211ENST00000531513 TMEM167BQ9NRX6 74 aa0.46□□□□□ -2.34
USP47-211ENST00000531513 CACNA1AO00555 2505 aa0.46□□□□□ -2.34
USP47-211ENST00000531513 OTOGQ6ZRI0 2925 aa0.45□□□□□ -2.34
USP47-211ENST00000531513 CLASP1Q7Z460 1538 aa0.45□□□□□ -2.34
USP47-211ENST00000531513 H0YGX0 51 aa0.45□□□□□ -2.34
USP47-211ENST00000531513 ADCY10Q96PN6 1610 aa0.45□□□□□ -2.34
USP47-211ENST00000531513 WT1-ASQ06250 92 aa0.44□□□□□ -2.34
USP47-211ENST00000531513 IGF2RP11717 2491 aa0.44□□□□□ -2.34
USP47-211ENST00000531513 LRP1Q07954 4544 aaKnown RBP0.43□□□□□ -2.34
USP47-211ENST00000531513 CROCC2H7BZ55 1655 aa0.43□□□□□ -2.34
USP47-211ENST00000531513 CHD6Q8TD26 2715 aa0.42□□□□□ -2.34
USP47-211ENST00000531513 H3BUA1 57 aa0.42□□□□□ -2.34
USP47-211ENST00000531513 SPRR2DP22532 72 aa0.42□□□□□ -2.34
USP47-211ENST00000531513 PLNP26678 52 aa0.42□□□□□ -2.34
USP47-211ENST00000531513 RPS27P42677 84 aaKnown RBP0.42□□□□□ -2.34
USP47-211ENST00000531513 PRLHP81277 87 aa0.42□□□□□ -2.34
USP47-211ENST00000531513 RPS27LQ71UM5 84 aaKnown RBP0.42□□□□□ -2.34
USP47-211ENST00000531513 UBR4Q5T4S7 5183 aa0.42□□□□□ -2.34
USP47-211ENST00000531513 FANCD2Q9BXW9 1451 aa0.41□□□□□ -2.34
USP47-211ENST00000531513 HUWE1Q7Z6Z7 4374 aaKnown RBP0.41□□□□□ -2.34
USP47-211ENST00000531513 PTPN13Q12923 2485 aa0.41□□□□□ -2.34
USP47-211ENST00000531513 CMC2Q9NRP2 79 aa0.41□□□□□ -2.34
USP47-211ENST00000531513 ITSN2Q9NZM3 1697 aa0.4□□□□□ -2.34
USP47-211ENST00000531513 SNRPGP15A8MWD9 76 aa0.4□□□□□ -2.35
USP47-211ENST00000531513 REV3LO60673 3130 aa0.4□□□□□ -2.35
USP47-211ENST00000531513 TNXBP22105 4242 aa0.4□□□□□ -2.35
USP47-211ENST00000531513 PCLOQ9Y6V0 5065 aa0.39□□□□□ -2.35
USP47-211ENST00000531513 ATRQ13535 2644 aa0.39□□□□□ -2.35
USP47-211ENST00000531513 S4R3F8 94 aa0.39□□□□□ -2.35
USP47-211ENST00000531513 CSPG4Q6UVK1 2322 aa0.39□□□□□ -2.35
USP47-211ENST00000531513 NEBP20929 6669 aa0.39□□□□□ -2.35
USP47-211ENST00000531513 SYNE2Q8WXH0 6885 aaKnown RBP0.38□□□□□ -2.35
USP47-211ENST00000531513 BPTFQ12830 3046 aa0.38□□□□□ -2.35
USP47-211ENST00000531513 MYCBP2O75592 4640 aa0.38□□□□□ -2.35
USP47-211ENST00000531513 FAT4Q6V0I7 4981 aa0.38□□□□□ -2.35
USP47-211ENST00000531513 DEFB106AQ8N104 65 aa0.38□□□□□ -2.35
USP47-211ENST00000531513 LINC00308Q8TCZ7 52 aa0.38□□□□□ -2.35
USP47-211ENST00000531513 TIMM8BQ9Y5J9 83 aaPredicted RBP0.38□□□□□ -2.35
USP47-211ENST00000531513 ABCA2Q9BZC7 2435 aa0.38□□□□□ -2.35
USP47-211ENST00000531513 PKD1L2Q7Z442 2459 aa0.38□□□□□ -2.35
USP47-211ENST00000531513 SPTA1P02549 2419 aa0.37□□□□□ -2.35
USP47-211ENST00000531513 MROH2AA6NES4 1674 aa0.37□□□□□ -2.35
USP47-211ENST00000531513 KMT2DO14686 5537 aa0.37□□□□□ -2.35
USP47-211ENST00000531513 FAT2Q9NYQ8 4349 aa0.37□□□□□ -2.35
USP47-211ENST00000531513 NCOR2Q9Y618 2525 aa0.37□□□□□ -2.35
USP47-211ENST00000531513 EP300Q09472 2414 aaPredicted RBP0.37□□□□□ -2.35
USP47-211ENST00000531513 KNL1Q8NG31 2342 aa0.37□□□□□ -2.35
USP47-211ENST00000531513 FSIP2Q5CZC0 6907 aa0.36□□□□□ -2.35
USP47-211ENST00000531513 SPRR2BP35325 72 aa0.36□□□□□ -2.35
USP47-211ENST00000531513 AGLP35573 1532 aa0.36□□□□□ -2.35
USP47-211ENST00000531513 ABCC8Q09428 1581 aa0.36□□□□□ -2.35
USP47-211ENST00000531513 MUC2Q02817 5179 aa0.35□□□□□ -2.35
USP47-211ENST00000531513 TRANK1O15050 2925 aa0.35□□□□□ -2.35
USP47-211ENST00000531513 HIVEP3Q5T1R4 2406 aa0.35□□□□□ -2.35
USP47-211ENST00000531513 PKD1L1Q8TDX9 2849 aa0.35□□□□□ -2.35
USP47-211ENST00000531513 MAST4O15021 2626 aa0.35□□□□□ -2.35
USP47-211ENST00000531513 PRKDCP78527 4128 aaKnown RBP0.35□□□□□ -2.35
USP47-211ENST00000531513 CDC42BPAQ5VT25 1732 aa0.35□□□□□ -2.35
USP47-211ENST00000531513 ABCA5Q8WWZ7 1642 aa0.35□□□□□ -2.35
USP47-211ENST00000531513 LPAP08519 4548 aa0.34□□□□□ -2.35
USP47-211ENST00000531513 NCOR1O75376 2440 aa0.34□□□□□ -2.35
USP47-211ENST00000531513 CHD8Q9HCK8 2581 aa0.34□□□□□ -2.35
USP47-211ENST00000531513 C9orf92A6NGG3 77 aa0.34□□□□□ -2.36
USP47-211ENST00000531513 PDE4DIPQ5VU43 2346 aa0.33□□□□□ -2.36
USP47-211ENST00000531513 EFCAB6Q5THR3 1501 aa0.33□□□□□ -2.36
USP47-211ENST00000531513 ABRACLQ9P1F3 81 aa0.33□□□□□ -2.36
USP47-211ENST00000531513 BSNQ9UPA5 3926 aa0.33□□□□□ -2.36
USP47-211ENST00000531513 STAB1Q9NY15 2570 aa0.33□□□□□ -2.36
USP47-211ENST00000531513 KIAA1109Q2LD37 5005 aa0.32□□□□□ -2.36
USP47-211ENST00000531513 NOP10Q9NPE3 64 aaKnown RBP0.32□□□□□ -2.36
USP47-211ENST00000531513 ALMS1Q8TCU4 4167 aa0.31□□□□□ -2.36
USP47-211ENST00000531513 ANKHD1Q8IWZ3 2542 aaKnown RBP0.31□□□□□ -2.36
USP47-211ENST00000531513 IGSF10Q6WRI0 2623 aa0.31□□□□□ -2.36
USP47-211ENST00000531513 HRNRQ86YZ3 2850 aaPredicted RBP0.31□□□□□ -2.36
USP47-211ENST00000531513 TOGARAM1Q9Y4F4 1720 aa0.3□□□□□ -2.36
USP47-211ENST00000531513 SMIM27A0A1W2PRY6 76 aa0.3□□□□□ -2.36
USP47-211ENST00000531513 UBR5O95071 2799 aaPredicted RBP0.28□□□□□ -2.36
USP47-211ENST00000531513 DSPP15924 2871 aaKnown RBP0.28□□□□□ -2.36
USP47-211ENST00000531513 KMT2AQ03164 3969 aa0.28□□□□□ -2.36
USP47-211ENST00000531513 ANKRD36CQ5JPF3 1778 aa0.28□□□□□ -2.36
USP47-211ENST00000531513 IGLV5-48A0A075B6I7 105 aa0.28□□□□□ -2.36
USP47-211ENST00000531513 LINC01546A6NGU7 62 aa0.28□□□□□ -2.36
USP47-211ENST00000531513 SPTBN4Q9H254 2564 aa0.28□□□□□ -2.37
USP47-211ENST00000531513 AKAP13Q12802 2813 aa0.28□□□□□ -2.37
USP47-211ENST00000531513 NRXN3Q9Y4C0 1643 aa0.27□□□□□ -2.37
USP47-211ENST00000531513 KMT2CQ8NEZ4 4911 aaKnown RBP0.26□□□□□ -2.37
USP47-211ENST00000531513 SSPOA2VEC9 5147 aa0.26□□□□□ -2.37
USP47-211ENST00000531513 PCNX1Q96RV3 2341 aa0.26□□□□□ -2.37
USP47-211ENST00000531513 H3BNG1 76 aa0.26□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms