RNA–Protein interactions for RNA: ENST00000513720.5

AFP-205, Transcript of alpha fetoprotein, humanhuman

TSL 1 (best)

Gene AFP, Length 197 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFP-205ENST00000513720 TENM2Q9NT68 2774 aa1.84□□□□□ -2.12
AFP-205ENST00000513720 CEP250Q9BV73 2442 aa1.83□□□□□ -2.12
AFP-205ENST00000513720 H3BNG1 76 aa1.83□□□□□ -2.12
AFP-205ENST00000513720 LINC01556Q5JQF7 62 aa1.83□□□□□ -2.12
AFP-205ENST00000513720 SPTBN4Q9H254 2564 aa1.83□□□□□ -2.12
AFP-205ENST00000513720 APC2O95996 2303 aa1.83□□□□□ -2.12
AFP-205ENST00000513720 ZNF462Q96JM2 2506 aa1.82□□□□□ -2.12
AFP-205ENST00000513720 KRTAP10-6P60371 365 aaPredicted RBP1.82□□□□□ -2.12
AFP-205ENST00000513720 DEFB103AP81534 67 aa1.82□□□□□ -2.12
AFP-205ENST00000513720 DEFB124Q8NES8 71 aa1.82□□□□□ -2.12
AFP-205ENST00000513720 NCOR1O75376 2440 aa1.81□□□□□ -2.12
AFP-205ENST00000513720 U3KQA8 63 aa1.81□□□□□ -2.12
AFP-205ENST00000513720 MAP1BP46821 2468 aaKnown RBP1.8□□□□□ -2.12
AFP-205ENST00000513720 COL6A3P12111 3177 aa1.8□□□□□ -2.12
AFP-205ENST00000513720 A0A1B0GVY2 172 aa1.79□□□□□ -2.12
AFP-205ENST00000513720 KRTAP13-1Q8IUC0 172 aa1.79□□□□□ -2.12
AFP-205ENST00000513720 JMJD1CQ15652 2540 aa1.79□□□□□ -2.12
AFP-205ENST00000513720 KRTAP10-9P60411 292 aa1.78□□□□□ -2.12
AFP-205ENST00000513720 LCE4AQ5TA78 99 aa1.78□□□□□ -2.12
AFP-205ENST00000513720 CACNA1HO95180 2353 aa1.78□□□□□ -2.12
AFP-205ENST00000513720 KRTAP10-11P60412 298 aa1.77□□□□□ -2.13
AFP-205ENST00000513720 CHD6Q8TD26 2715 aa1.77□□□□□ -2.13
AFP-205ENST00000513720 DSPP15924 2871 aaKnown RBP1.76□□□□□ -2.13
AFP-205ENST00000513720 LCE5AQ5TCM9 118 aa1.75□□□□□ -2.13
AFP-205ENST00000513720 BAHCC1Q9P281 2608 aa1.74□□□□□ -2.13
AFP-205ENST00000513720 CEP350Q5VT06 3117 aa1.74□□□□□ -2.13
AFP-205ENST00000513720 KRTAP19-4Q3LI73 84 aa1.74□□□□□ -2.13
AFP-205ENST00000513720 CCDC168Q8NDH2 2452 aa1.73□□□□□ -2.13
AFP-205ENST00000513720 DEFB4AO15263 64 aa1.73□□□□□ -2.13
AFP-205ENST00000513720 KRTAP1-1Q07627 177 aa1.73□□□□□ -2.13
AFP-205ENST00000513720 GVINP1Q7Z2Y8 2422 aa1.73□□□□□ -2.13
AFP-205ENST00000513720 COL6A5A8TX70 2615 aa1.73□□□□□ -2.13
AFP-205ENST00000513720 DEFB135Q30KP9 77 aa1.72□□□□□ -2.13
AFP-205ENST00000513720 ABCA2Q9BZC7 2435 aa1.72□□□□□ -2.13
AFP-205ENST00000513720 ASH1LQ9NR48 2969 aaKnown RBP1.72□□□□□ -2.13
AFP-205ENST00000513720 OTOGQ6ZRI0 2925 aa1.72□□□□□ -2.13
AFP-205ENST00000513720 KRTAP1-4P0C5Y4 121 aa1.71□□□□□ -2.14
AFP-205ENST00000513720 ATRXP46100 2492 aa1.71□□□□□ -2.14
AFP-205ENST00000513720 MUC6Q6W4X9 2439 aa1.7□□□□□ -2.14
AFP-205ENST00000513720 C2CD3Q4AC94 2353 aa1.7□□□□□ -2.14
AFP-205ENST00000513720 PRRC2CQ9Y520 2896 aaKnown RBP1.69□□□□□ -2.14
AFP-205ENST00000513720 KRTAP10-1P60331 282 aa1.69□□□□□ -2.14
AFP-205ENST00000513720 UBR5O95071 2799 aaPredicted RBP1.69□□□□□ -2.14
AFP-205ENST00000513720 SRRM2Q9UQ35 2752 aaKnown RBP1.69□□□□□ -2.14
AFP-205ENST00000513720 NBASA2RRP1 2371 aa1.69□□□□□ -2.14
AFP-205ENST00000513720 FAM186AA6NE01 2351 aa1.68□□□□□ -2.14
AFP-205ENST00000513720 TNP1P09430 55 aa1.68□□□□□ -2.14
AFP-205ENST00000513720 KRTAP2-2Q9BYT5 123 aa1.68□□□□□ -2.14
AFP-205ENST00000513720 VPS13DQ5THJ4 4388 aa1.68□□□□□ -2.14
AFP-205ENST00000513720 F8P00451 2351 aa1.67□□□□□ -2.14
AFP-205ENST00000513720 CELSR2Q9HCU4 2923 aa1.67□□□□□ -2.14
AFP-205ENST00000513720 TNRC18O15417 2968 aaPredicted RBP1.67□□□□□ -2.14
AFP-205ENST00000513720 KRTAP9-7A8MTY7 169 aa1.67□□□□□ -2.14
AFP-205ENST00000513720 KRTAP10-10P60014 251 aa1.67□□□□□ -2.14
AFP-205ENST00000513720 PRUNE2Q8WUY3 3088 aa1.66□□□□□ -2.14
AFP-205ENST00000513720 EP300Q09472 2414 aaPredicted RBP1.66□□□□□ -2.14
AFP-205ENST00000513720 CREBBPQ92793 2442 aa1.66□□□□□ -2.14
AFP-205ENST00000513720 KRTAP10-2P60368 255 aa1.66□□□□□ -2.14
AFP-205ENST00000513720 CEP290O15078 2479 aa1.65□□□□□ -2.14
AFP-205ENST00000513720 PKD1L2Q7Z442 2459 aa1.65□□□□□ -2.14
AFP-205ENST00000513720 ZZEF1O43149 2961 aa1.65□□□□□ -2.15
AFP-205ENST00000513720 RP1L1Q8IWN7 2480 aaPredicted RBP1.65□□□□□ -2.15
AFP-205ENST00000513720 SPG11Q96JI7 2443 aa1.65□□□□□ -2.15
AFP-205ENST00000513720 REV3LO60673 3130 aa1.64□□□□□ -2.15
AFP-205ENST00000513720 AKAP9Q99996 3911 aa1.63□□□□□ -2.15
AFP-205ENST00000513720 KRTAP10-3P60369 221 aa1.63□□□□□ -2.15
AFP-205ENST00000513720 TTC28Q96AY4 2481 aa1.63□□□□□ -2.15
AFP-205ENST00000513720 ITPR1Q14643 2758 aa1.63□□□□□ -2.15
AFP-205ENST00000513720 NCOR2Q9Y618 2525 aa1.63□□□□□ -2.15
AFP-205ENST00000513720 NBEAQ8NFP9 2946 aa1.63□□□□□ -2.15
AFP-205ENST00000513720 MAP1AP78559 2803 aaPredicted RBP1.62□□□□□ -2.15
AFP-205ENST00000513720 FBN1P35555 2871 aaKnown RBP1.62□□□□□ -2.15
AFP-205ENST00000513720 TRANK1O15050 2925 aa1.62□□□□□ -2.15
AFP-205ENST00000513720 KRTAP9-3Q9BYQ3 159 aa1.62□□□□□ -2.15
AFP-205ENST00000513720 ABCA12Q86UK0 2595 aa1.62□□□□□ -2.15
AFP-205ENST00000513720 NAV2Q8IVL1 2488 aa1.62□□□□□ -2.15
AFP-205ENST00000513720 DMBT1Q9UGM3 2413 aaPredicted RBP1.61□□□□□ -2.15
AFP-205ENST00000513720 VWFP04275 2813 aa1.61□□□□□ -2.15
AFP-205ENST00000513720 ANKHD1Q8IWZ3 2542 aaKnown RBP1.61□□□□□ -2.15
AFP-205ENST00000513720 RPS29P62273 56 aaKnown RBP1.61□□□□□ -2.15
AFP-205ENST00000513720 CRYBG3Q68DQ2 2970 aa1.61□□□□□ -2.15
AFP-205ENST00000513720 MT3P25713 68 aa1.6□□□□□ -2.15
AFP-205ENST00000513720 AKAP13Q12802 2813 aa1.6□□□□□ -2.15
AFP-205ENST00000513720 NBPF19A0A087WUL8 3843 aa1.6□□□□□ -2.15
AFP-205ENST00000513720 CFAP54Q96N23 3096 aa1.58□□□□□ -2.16
AFP-205ENST00000513720 C9orf92A6NGG3 77 aa1.58□□□□□ -2.16
AFP-205ENST00000513720 KRTAP1-5Q9BYS1 174 aa1.58□□□□□ -2.16
AFP-205ENST00000513720 CELSR1Q9NYQ6 3014 aa1.58□□□□□ -2.16
AFP-205ENST00000513720 SRCAPQ6ZRS2 3230 aa1.57□□□□□ -2.16
AFP-205ENST00000513720 DNAH11Q96DT5 4516 aa1.57□□□□□ -2.16
AFP-205ENST00000513720 FRYLO94915 3013 aa1.57□□□□□ -2.16
AFP-205ENST00000513720 RANBP2P49792 3224 aaKnown RBP1.57□□□□□ -2.16
AFP-205ENST00000513720 PTPN13Q12923 2485 aa1.56□□□□□ -2.16
AFP-205ENST00000513720 SONP18583 2426 aaKnown RBP1.55□□□□□ -2.16
AFP-205ENST00000513720 ZFHX4Q86UP3 3567 aa1.55□□□□□ -2.16
AFP-205ENST00000513720 VPS13AQ96RL7 3174 aa1.55□□□□□ -2.16
AFP-205ENST00000513720 HIVEP3Q5T1R4 2406 aa1.55□□□□□ -2.16
AFP-205ENST00000513720 SPTBN5Q9NRC6 3674 aaKnown RBP1.54□□□□□ -2.16
AFP-205ENST00000513720 CFAP47Q6ZTR5 3102 aa1.54□□□□□ -2.16
AFP-205ENST00000513720 RIF1Q5UIP0 2472 aaKnown RBP1.54□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms