RNA–Protein interactions for RNA: ENST00000486812.5

PRDM15-212, Transcript of PR/SET domain 15, humanhuman

TSL 1 (best)

Gene PRDM15, Length 7,072 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM15-212ENST00000486812 CHD8Q9HCK8 2581 aa5.86□□□□□ -1.47
PRDM15-212ENST00000486812 BDP1A6H8Y1 2624 aa5.85□□□□□ -1.47
PRDM15-212ENST00000486812 PP632Q6XCG6 107 aa5.85□□□□□ -1.47
PRDM15-212ENST00000486812 H0YAA0 97 aa5.84□□□□□ -1.47
PRDM15-212ENST00000486812 EP400Q96L91 3159 aa5.84□□□□□ -1.47
PRDM15-212ENST00000486812 SETD2Q9BYW2 2564 aaPredicted RBP5.83□□□□□ -1.48
PRDM15-212ENST00000486812 PCNTO95613 3336 aa5.82□□□□□ -1.48
PRDM15-212ENST00000486812 JMJD1CQ15652 2540 aa5.8□□□□□ -1.48
PRDM15-212ENST00000486812 ACANP16112 2415 aa5.8□□□□□ -1.48
PRDM15-212ENST00000486812 IGF2RP11717 2491 aa5.79□□□□□ -1.48
PRDM15-212ENST00000486812 USP9YO00507 2555 aaPredicted RBP5.79□□□□□ -1.48
PRDM15-212ENST00000486812 ANKRD17O75179 2603 aaKnown RBP5.79□□□□□ -1.48
PRDM15-212ENST00000486812 MTORP42345 2549 aa5.76□□□□□ -1.49
PRDM15-212ENST00000486812 BPTFQ12830 3046 aa5.76□□□□□ -1.49
PRDM15-212ENST00000486812 FLG2Q5D862 2391 aaPredicted RBP5.76□□□□□ -1.49
PRDM15-212ENST00000486812 RPS29P62273 56 aaKnown RBP5.75□□□□□ -1.49
PRDM15-212ENST00000486812 KRTAP7-1Q8IUC3 87 aa5.75□□□□□ -1.49
PRDM15-212ENST00000486812 M0R2T5 61 aa5.74□□□□□ -1.49
PRDM15-212ENST00000486812 KRTAP1-5Q9BYS1 174 aa5.74□□□□□ -1.49
PRDM15-212ENST00000486812 KRTAP1-3Q8IUG1 177 aa5.72□□□□□ -1.49
PRDM15-212ENST00000486812 TNP1P09430 55 aa5.71□□□□□ -1.5
PRDM15-212ENST00000486812 KRTAP13-1Q8IUC0 172 aa5.71□□□□□ -1.5
PRDM15-212ENST00000486812 POLQO75417 2590 aa5.69□□□□□ -1.5
PRDM15-212ENST00000486812 KRTAP1-1Q07627 177 aa5.69□□□□□ -1.5
PRDM15-212ENST00000486812 CENPFP49454 3210 aa5.67□□□□□ -1.5
PRDM15-212ENST00000486812 ZFYVE26Q68DK2 2539 aa5.64□□□□□ -1.51
PRDM15-212ENST00000486812 KRTAP10-8P60410 259 aa5.58□□□□□ -1.52
PRDM15-212ENST00000486812 DMBT1Q9UGM3 2413 aaPredicted RBP5.58□□□□□ -1.52
PRDM15-212ENST00000486812 ANKRD11Q6UB99 2663 aaPredicted RBP5.55□□□□□ -1.52
PRDM15-212ENST00000486812 KRTAP13-2Q52LG2 175 aa5.55□□□□□ -1.52
PRDM15-212ENST00000486812 Q6ZRN7 208 aaPredicted RBP5.55□□□□□ -1.52
PRDM15-212ENST00000486812 SPTBN4Q9H254 2564 aa5.54□□□□□ -1.52
PRDM15-212ENST00000486812 KRTAP10-1P60331 282 aa5.54□□□□□ -1.52
PRDM15-212ENST00000486812 PIEZO1Q92508 2521 aa5.52□□□□□ -1.53
PRDM15-212ENST00000486812 FASNP49327 2511 aaKnown RBP5.5□□□□□ -1.53
PRDM15-212ENST00000486812 TPRXLQ17RH7 258 aa5.49□□□□□ -1.53
PRDM15-212ENST00000486812 KRTAP10-2P60368 255 aa5.48□□□□□ -1.53
PRDM15-212ENST00000486812 BRCA2P51587 3418 aa5.47□□□□□ -1.53
PRDM15-212ENST00000486812 KRTAP13-3Q3SY46 172 aa5.45□□□□□ -1.54
PRDM15-212ENST00000486812 CENPEQ02224 2701 aa5.45□□□□□ -1.54
PRDM15-212ENST00000486812 XIRP2A4UGR9 3374 aa5.43□□□□□ -1.54
PRDM15-212ENST00000486812 EPG5Q9HCE0 2579 aa5.43□□□□□ -1.54
PRDM15-212ENST00000486812 KRTAP15-1Q3LI76 137 aa5.43□□□□□ -1.54
PRDM15-212ENST00000486812 PRRC2CQ9Y520 2896 aaKnown RBP5.43□□□□□ -1.54
PRDM15-212ENST00000486812 CEP350Q5VT06 3117 aa5.43□□□□□ -1.54
PRDM15-212ENST00000486812 CEP295Q9C0D2 2601 aa5.42□□□□□ -1.54
PRDM15-212ENST00000486812 DNAH12Q6ZR08 3092 aa5.42□□□□□ -1.54
PRDM15-212ENST00000486812 A0A0C4DFX4 3053 aa5.4□□□□□ -1.54
PRDM15-212ENST00000486812 MKI67P46013 3256 aaKnown RBP5.4□□□□□ -1.55
PRDM15-212ENST00000486812 INE1O15225 51 aa5.39□□□□□ -1.55
PRDM15-212ENST00000486812 USP34Q70CQ2 3546 aa5.37□□□□□ -1.55
PRDM15-212ENST00000486812 LAMA3Q16787 3333 aa5.36□□□□□ -1.55
PRDM15-212ENST00000486812 Q5VSD8 79 aa5.36□□□□□ -1.55
PRDM15-212ENST00000486812 SZT2Q5T011 3432 aa5.35□□□□□ -1.55
PRDM15-212ENST00000486812 KRTAP12-2P59991 146 aa5.34□□□□□ -1.56
PRDM15-212ENST00000486812 PRO2289Q9P1D8 64 aa5.31□□□□□ -1.56
PRDM15-212ENST00000486812 NBEAL1Q6ZS30 2694 aa5.31□□□□□ -1.56
PRDM15-212ENST00000486812 USP24Q9UPU5 2620 aa5.3□□□□□ -1.56
PRDM15-212ENST00000486812 UNC79Q9P2D8 2635 aa5.29□□□□□ -1.56
PRDM15-212ENST00000486812 CDH23Q9H251 3354 aa5.28□□□□□ -1.56
PRDM15-212ENST00000486812 EYSQ5T1H1 3165 aa5.27□□□□□ -1.57
PRDM15-212ENST00000486812 KRTAP13-4Q3LI77 160 aa5.26□□□□□ -1.57
PRDM15-212ENST00000486812 GCN1Q92616 2671 aaKnown RBP5.24□□□□□ -1.57
PRDM15-212ENST00000486812 KRTAP12-1P59990 96 aa5.24□□□□□ -1.57
PRDM15-212ENST00000486812 VCANP13611 3396 aa5.22□□□□□ -1.57
PRDM15-212ENST00000486812 C5orf42Q9H799 3197 aa5.22□□□□□ -1.57
PRDM15-212ENST00000486812 FLNAP21333 2647 aaKnown RBP5.21□□□□□ -1.58
PRDM15-212ENST00000486812 STAB2Q8WWQ8 2551 aa5.19□□□□□ -1.58
PRDM15-212ENST00000486812 KRTAP1-4P0C5Y4 121 aa5.19□□□□□ -1.58
PRDM15-212ENST00000486812 HELZ2Q9BYK8 2649 aaKnown RBP5.19□□□□□ -1.58
PRDM15-212ENST00000486812 CHD6Q8TD26 2715 aa5.18□□□□□ -1.58
PRDM15-212ENST00000486812 AKAP13Q12802 2813 aa5.17□□□□□ -1.58
PRDM15-212ENST00000486812 MGAM2Q2M2H8 2515 aa5.17□□□□□ -1.58
PRDM15-212ENST00000486812 CHD9Q3L8U1 2897 aa5.16□□□□□ -1.58
PRDM15-212ENST00000486812 XP32Q5T750 250 aa5.16□□□□□ -1.58
PRDM15-212ENST00000486812 MYO15AQ9UKN7 3530 aa5.16□□□□□ -1.58
PRDM15-212ENST00000486812 DNAH14Q0VDD8 3507 aa5.15□□□□□ -1.58
PRDM15-212ENST00000486812 ATRQ13535 2644 aa5.14□□□□□ -1.59
PRDM15-212ENST00000486812 SPTBN5Q9NRC6 3674 aaKnown RBP5.14□□□□□ -1.59
PRDM15-212ENST00000486812 ITPR1Q14643 2758 aa5.13□□□□□ -1.59
PRDM15-212ENST00000486812 PRUNE2Q8WUY3 3088 aa5.12□□□□□ -1.59
PRDM15-212ENST00000486812 CHD7Q9P2D1 2997 aa5.12□□□□□ -1.59
PRDM15-212ENST00000486812 ITPR3Q14573 2671 aa5.11□□□□□ -1.59
PRDM15-212ENST00000486812 UNC80Q8N2C7 3258 aa5.11□□□□□ -1.59
PRDM15-212ENST00000486812 CFAP54Q96N23 3096 aa5.1□□□□□ -1.59
PRDM15-212ENST00000486812 NBEAL2Q6ZNJ1 2754 aa5.09□□□□□ -1.59
PRDM15-212ENST00000486812 TRANK1O15050 2925 aa5.08□□□□□ -1.6
PRDM15-212ENST00000486812 LAMA2P24043 3122 aaKnown RBP5.08□□□□□ -1.6
PRDM15-212ENST00000486812 HTTP42858 3142 aa5.07□□□□□ -1.6
PRDM15-212ENST00000486812 COL6A3P12111 3177 aa5.07□□□□□ -1.6
PRDM15-212ENST00000486812 RANBP2P49792 3224 aaKnown RBP5.04□□□□□ -1.6
PRDM15-212ENST00000486812 BAHCC1Q9P281 2608 aa5.04□□□□□ -1.6
PRDM15-212ENST00000486812 NOTCH1P46531 2555 aa5.03□□□□□ -1.6
PRDM15-212ENST00000486812 KRTAP3-1Q9BYR8 98 aa5.03□□□□□ -1.6
PRDM15-212ENST00000486812 KRTAP10-6P60371 365 aaPredicted RBP5.02□□□□□ -1.61
PRDM15-212ENST00000486812 WDFY4Q6ZS81 3184 aa5.01□□□□□ -1.61
PRDM15-212ENST00000486812 STAB1Q9NY15 2570 aa4.99□□□□□ -1.61
PRDM15-212ENST00000486812 CFAP46Q8IYW2 2715 aa4.99□□□□□ -1.61
PRDM15-212ENST00000486812 APCP25054 2843 aa4.98□□□□□ -1.61
PRDM15-212ENST00000486812 ASPMQ8IZT6 3477 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms