RNA–Protein interactions for RNA: ENST00000486812.5

PRDM15-212, Transcript of PR/SET domain 15, humanhuman

TSL 1 (best)

Gene PRDM15, Length 7,072 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM15-212ENST00000486812 MYT1Q01538 1121 aa17.64■□□□□ 0.42
PRDM15-212ENST00000486812 PELP1Q8IZL8 1130 aaKnown RBP17.57■□□□□ 0.4
PRDM15-212ENST00000486812 CENPBP07199 599 aaPredicted RBP16.45■□□□□ 0.22
PRDM15-212ENST00000486812 ERICH6Q7L0X2 663 aa16.43■□□□□ 0.22
PRDM15-212ENST00000486812 CCER1Q8TC90 406 aaPredicted RBP16.31■□□□□ 0.2
PRDM15-212ENST00000486812 TTBK1Q5TCY1 1321 aaPredicted RBP16.3■□□□□ 0.2
PRDM15-212ENST00000486812 ZEB1P37275 1124 aaPredicted RBP16.15■□□□□ 0.18
PRDM15-212ENST00000486812 PCGF6Q9BYE7 350 aa15.98■□□□□ 0.15
PRDM15-212ENST00000486812 SUPT5HO00267 1087 aaKnown RBP15.84■□□□□ 0.13
PRDM15-212ENST00000486812 YTHDC1Q96MU7 727 aaKnown RBP15.78■□□□□ 0.12
PRDM15-212ENST00000486812 HRCP23327 699 aa15.78■□□□□ 0.12
PRDM15-212ENST00000486812 NEFLP07196 543 aa15.73■□□□□ 0.11
PRDM15-212ENST00000486812 DCAF8L2P0C7V8 631 aa15.53■□□□□ 0.08
PRDM15-212ENST00000486812 RTL5Q5HYW3 569 aaPredicted RBP15.4■□□□□ 0.06
PRDM15-212ENST00000486812 APLP2Q06481 763 aa15.31■□□□□ 0.04
PRDM15-212ENST00000486812 DAXXQ9UER7 740 aaPredicted RBP15.29■□□□□ 0.04
PRDM15-212ENST00000486812 TRIM26Q12899 539 aaPredicted RBP15.26■□□□□ 0.03
PRDM15-212ENST00000486812 EHMT2Q96KQ7 1210 aa15.24■□□□□ 0.03
PRDM15-212ENST00000486812 GTF3C3Q9Y5Q9 886 aa15.23■□□□□ 0.03
PRDM15-212ENST00000486812 NISCHQ9Y2I1 1504 aa15.22■□□□□ 0.03
PRDM15-212ENST00000486812 GLIPR1L2Q4G1C9 344 aa15.21■□□□□ 0.03
PRDM15-212ENST00000486812 PPARGC1BQ86YN6 1023 aaKnown RBP15.17■□□□□ 0.02
PRDM15-212ENST00000486812 SHROOM4Q9ULL8 1493 aa15.14■□□□□ 0.01
PRDM15-212ENST00000486812 MYT1LQ9UL68 1186 aa15.11■□□□□ 0.01
PRDM15-212ENST00000486812 ACIN1Q9UKV3 1341 aaKnown RBP15.07■□□□□ 0
PRDM15-212ENST00000486812 DIEXFQ68CQ4 756 aaKnown RBP15.04■□□□□ -0
PRDM15-212ENST00000486812 EIF5BO60841 1220 aaKnown RBP15□□□□□ -0.01
PRDM15-212ENST00000486812 ZNF316A6NFI3 1004 aaPredicted RBP14.96□□□□□ -0.01
PRDM15-212ENST00000486812 FAM9AQ8IZU1 332 aaPredicted RBP14.9□□□□□ -0.02
PRDM15-212ENST00000486812 CLSPNQ9HAW4 1339 aa14.89□□□□□ -0.03
PRDM15-212ENST00000486812 CDK11AQ9UQ88 783 aaPredicted RBP14.88□□□□□ -0.03
PRDM15-212ENST00000486812 BCL11AQ9H165 835 aa14.81□□□□□ -0.04
PRDM15-212ENST00000486812 SCAF1Q9H7N4 1312 aaKnown RBP14.77□□□□□ -0.04
PRDM15-212ENST00000486812 ANP32EQ9BTT0 268 aa14.74□□□□□ -0.05
PRDM15-212ENST00000486812 BCANQ96GW7 911 aa14.72□□□□□ -0.05
PRDM15-212ENST00000486812 TRIM41Q8WV44 630 aa14.68□□□□□ -0.06
PRDM15-212ENST00000486812 ANP32AP39687 249 aaKnown RBP14.67□□□□□ -0.06
PRDM15-212ENST00000486812 NEUROD1Q13562 356 aa14.53□□□□□ -0.08
PRDM15-212ENST00000486812 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.51□□□□□ -0.09
PRDM15-212ENST00000486812 RANGAP1P46060 587 aaPredicted RBP14.46□□□□□ -0.09
PRDM15-212ENST00000486812 UBTFP17480 764 aaKnown RBP14.42□□□□□ -0.1
PRDM15-212ENST00000486812 ANP32BQ92688 251 aaKnown RBP14.42□□□□□ -0.1
PRDM15-212ENST00000486812 NBR1Q14596 966 aa14.42□□□□□ -0.1
PRDM15-212ENST00000486812 TNNT2P45379 298 aaPredicted RBP14.39□□□□□ -0.11
PRDM15-212ENST00000486812 FKBP8Q14318 412 aa14.36□□□□□ -0.11
PRDM15-212ENST00000486812 ZBTB47Q9UFB7 747 aaPredicted RBP14.36□□□□□ -0.11
PRDM15-212ENST00000486812 CHIC1Q5VXU3 224 aa14.35□□□□□ -0.11
PRDM15-212ENST00000486812 LOC105371045A0A1W2PR82 267 aa14.35□□□□□ -0.11
PRDM15-212ENST00000486812 ANP32CO43423 234 aa14.34□□□□□ -0.11
PRDM15-212ENST00000486812 NPM2Q86SE8 214 aaKnown RBP14.29□□□□□ -0.12
PRDM15-212ENST00000486812 HNRNPUL2Q1KMD3 747 aaKnown RBP14.29□□□□□ -0.12
PRDM15-212ENST00000486812 ERICH6BQ5W0A0 696 aa14.27□□□□□ -0.13
PRDM15-212ENST00000486812 NCLP19338 710 aaKnown RBP14.22□□□□□ -0.13
PRDM15-212ENST00000486812 POLR3GLQ9BT43 218 aa14.21□□□□□ -0.14
PRDM15-212ENST00000486812 CDK11BP21127 795 aaKnown RBP14.19□□□□□ -0.14
PRDM15-212ENST00000486812 TRIM44Q96DX7 344 aaPredicted RBP14.17□□□□□ -0.14
PRDM15-212ENST00000486812 ATP1B4Q9UN42 357 aaPredicted RBP14.16□□□□□ -0.14
PRDM15-212ENST00000486812 RTN4Q9NQC3 1192 aaKnown RBP14.16□□□□□ -0.14
PRDM15-212ENST00000486812 DEKP35659 375 aaKnown RBP14.15□□□□□ -0.14
PRDM15-212ENST00000486812 NEFMP07197 916 aa14.13□□□□□ -0.15
PRDM15-212ENST00000486812 NAP1L5Q96NT1 182 aaPredicted RBP14.13□□□□□ -0.15
PRDM15-212ENST00000486812 SLC24A1O60721 1099 aa14.11□□□□□ -0.15
PRDM15-212ENST00000486812 PRKCSHP14314 528 aaPredicted RBP14.1□□□□□ -0.15
PRDM15-212ENST00000486812 CSRNP3Q8WYN3 585 aa14.08□□□□□ -0.16
PRDM15-212ENST00000486812 DCAF1Q9Y4B6 1507 aa14.08□□□□□ -0.16
PRDM15-212ENST00000486812 DDRGK1Q96HY6 314 aa14.08□□□□□ -0.16
PRDM15-212ENST00000486812 PPM1GO15355 546 aaPredicted RBP14.08□□□□□ -0.16
PRDM15-212ENST00000486812 ITGAEP38570 1179 aa14.07□□□□□ -0.16
PRDM15-212ENST00000486812 CNGB1Q14028 1251 aaPredicted RBP14.06□□□□□ -0.16
PRDM15-212ENST00000486812 UPF2Q9HAU5 1272 aaKnown RBP14.03□□□□□ -0.16
PRDM15-212ENST00000486812 NOP58Q9Y2X3 529 aaKnown RBP14.02□□□□□ -0.17
PRDM15-212ENST00000486812 HSP90AA1P07900 732 aaKnown RBP13.99□□□□□ -0.17
PRDM15-212ENST00000486812 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.98□□□□□ -0.17
PRDM15-212ENST00000486812 CCDC136Q96JN2 1154 aa13.98□□□□□ -0.17
PRDM15-212ENST00000486812 ARXQ96QS3 562 aa13.97□□□□□ -0.17
PRDM15-212ENST00000486812 MIER1Q8N108 512 aa13.93□□□□□ -0.18
PRDM15-212ENST00000486812 SUPT16HQ9Y5B9 1047 aaKnown RBP13.93□□□□□ -0.18
PRDM15-212ENST00000486812 CANXP27824 592 aaKnown RBP13.91□□□□□ -0.18
PRDM15-212ENST00000486812 HNRNPUQ00839 825 aaKnown RBP eCLIP13.91□□□□□ -0.18
PRDM15-212ENST00000486812 RSPH6AQ9H0K4 717 aa13.88□□□□□ -0.19
PRDM15-212ENST00000486812 BECN1Q14457 450 aa13.88□□□□□ -0.19
PRDM15-212ENST00000486812 PKNOX2Q96KN3 472 aa13.85□□□□□ -0.19
PRDM15-212ENST00000486812 RBM19Q9Y4C8 960 aaKnown RBP13.85□□□□□ -0.19
PRDM15-212ENST00000486812 L1TD1Q5T7N2 865 aaKnown RBP13.85□□□□□ -0.19
PRDM15-212ENST00000486812 PODXL2Q9NZ53 605 aa13.85□□□□□ -0.19
PRDM15-212ENST00000486812 VSIG10Q8N0Z9 540 aa13.84□□□□□ -0.19
PRDM15-212ENST00000486812 ZNF326Q5BKZ1 582 aaKnown RBP13.83□□□□□ -0.2
PRDM15-212ENST00000486812 HSP90AA2PQ14568 343 aaPredicted RBP13.79□□□□□ -0.2
PRDM15-212ENST00000486812 CCDC180Q9P1Z9 1646 aa13.78□□□□□ -0.2
PRDM15-212ENST00000486812 DNTTIP2Q5QJE6 756 aaKnown RBP13.78□□□□□ -0.2
PRDM15-212ENST00000486812 TRIM52Q96A61 297 aa13.78□□□□□ -0.2
PRDM15-212ENST00000486812 LAS1LQ9Y4W2 734 aaKnown RBP13.78□□□□□ -0.2
PRDM15-212ENST00000486812 AMER1Q5JTC6 1135 aaPredicted RBP13.78□□□□□ -0.2
PRDM15-212ENST00000486812 TSHZ2Q9NRE2 1034 aa13.77□□□□□ -0.21
PRDM15-212ENST00000486812 GOLGA6L22H0YM25 854 aa13.76□□□□□ -0.21
PRDM15-212ENST00000486812 PNNQ9H307 717 aaKnown RBP13.75□□□□□ -0.21
PRDM15-212ENST00000486812 PTMAP06454 111 aaKnown RBP13.73□□□□□ -0.21
PRDM15-212ENST00000486812 IRX6P78412 446 aaPredicted RBP13.73□□□□□ -0.21
PRDM15-212ENST00000486812 PPP4R2Q9NY27 417 aa13.73□□□□□ -0.21
PRDM15-212ENST00000486812 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.71□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 92.7 ms