RNA–Protein interactions for RNA: ENST00000419472.1

VPS13A-207, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 1 (best)

Gene VPS13A, Length 2,781 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-207ENST00000419472 Q5VV11 94 aa3.1□□□□□ -1.91
VPS13A-207ENST00000419472 TRAV21A0A0B4J279 112 aa3.09□□□□□ -1.91
VPS13A-207ENST00000419472 RNASE3P12724 160 aaKnown RBP3.09□□□□□ -1.91
VPS13A-207ENST00000419472 PRR9Q5T870 116 aa3.09□□□□□ -1.91
VPS13A-207ENST00000419472 ST20-AS1Q8NBB2 130 aa3.09□□□□□ -1.91
VPS13A-207ENST00000419472 C1orf64Q8NEQ6 169 aa3.09□□□□□ -1.91
VPS13A-207ENST00000419472 SMIM11BQ8TCY0 68 aa3.09□□□□□ -1.91
VPS13A-207ENST00000419472 KRTAP9-8Q9BYQ0 159 aa3.09□□□□□ -1.91
VPS13A-207ENST00000419472 IGLV7-43P04211 117 aa3.09□□□□□ -1.92
VPS13A-207ENST00000419472 CRPP02741 224 aa3.08□□□□□ -1.92
VPS13A-207ENST00000419472 HTN1P15515 57 aa3.08□□□□□ -1.92
VPS13A-207ENST00000419472 LINC01554Q52M75 96 aa3.08□□□□□ -1.92
VPS13A-207ENST00000419472 LCE1FQ5T754 118 aa3.08□□□□□ -1.92
VPS13A-207ENST00000419472 USMG5Q96IX5 58 aa3.08□□□□□ -1.92
VPS13A-207ENST00000419472 IGKV2-28A0A075B6P5 120 aa3.08□□□□□ -1.92
VPS13A-207ENST00000419472 LOC110117498A0A087WWA1 95 aa3.08□□□□□ -1.92
VPS13A-207ENST00000419472 PSCAO43653 123 aa3.08□□□□□ -1.92
VPS13A-207ENST00000419472 IGKV2D-28P01615 120 aa3.08□□□□□ -1.92
VPS13A-207ENST00000419472 IGHV3-73A0A0B4J1V6 119 aa3.07□□□□□ -1.92
VPS13A-207ENST00000419472 LRCOL1A6NCL2 159 aa3.07□□□□□ -1.92
VPS13A-207ENST00000419472 M0QY20 66 aa3.07□□□□□ -1.92
VPS13A-207ENST00000419472 NDUFA4O00483 81 aa3.07□□□□□ -1.92
VPS13A-207ENST00000419472 GNRH2O43555 120 aa3.07□□□□□ -1.92
VPS13A-207ENST00000419472 Q6ZQT0 140 aa3.07□□□□□ -1.92
VPS13A-207ENST00000419472 Q6ZTI0 123 aa3.07□□□□□ -1.92
VPS13A-207ENST00000419472 ANK2Q01484 3957 aa3.07□□□□□ -1.92
VPS13A-207ENST00000419472 HCG22E2RYF7 251 aa3.06□□□□□ -1.92
VPS13A-207ENST00000419472 HAMPP81172 84 aa3.06□□□□□ -1.92
VPS13A-207ENST00000419472 KPRPQ5T749 579 aaPredicted RBP3.06□□□□□ -1.92
VPS13A-207ENST00000419472 MUC7Q8TAX7 377 aa3.06□□□□□ -1.92
VPS13A-207ENST00000419472 CYP4F30PQ9H0H9 118 aa3.06□□□□□ -1.92
VPS13A-207ENST00000419472 TRBV6-8A0A0A6YYG3 113 aa3.06□□□□□ -1.92
VPS13A-207ENST00000419472 TRBV10-1A0A0K0K1A3 114 aa3.06□□□□□ -1.92
VPS13A-207ENST00000419472 KRTAP5-3Q6L8H2 238 aa3.06□□□□□ -1.92
VPS13A-207ENST00000419472 CDKN2A-AS1Q9UH64 79 aa3.06□□□□□ -1.92
VPS13A-207ENST00000419472 SPINK13Q1W4C9 94 aa3.06□□□□□ -1.92
VPS13A-207ENST00000419472 SPTSSBQ8NFR3 76 aa3.06□□□□□ -1.92
VPS13A-207ENST00000419472 HIGD2AQ9BW72 106 aa3.06□□□□□ -1.92
VPS13A-207ENST00000419472 LCE6AA0A183 80 aa3.05□□□□□ -1.92
VPS13A-207ENST00000419472 H3BUA1 57 aa3.05□□□□□ -1.92
VPS13A-207ENST00000419472 KLK9Q2XQG4 91 aa3.05□□□□□ -1.92
VPS13A-207ENST00000419472 KLK9Q9UKQ9 250 aa3.05□□□□□ -1.92
VPS13A-207ENST00000419472 TENM3Q9P273 2699 aa3.05□□□□□ -1.92
VPS13A-207ENST00000419472 CHKB-CPT1BH3BT56 60 aa3.05□□□□□ -1.92
VPS13A-207ENST00000419472 IGHV3-53P01767 116 aa3.05□□□□□ -1.92
VPS13A-207ENST00000419472 KRTAP25-1Q3LHN0 102 aa3.05□□□□□ -1.92
VPS13A-207ENST00000419472 Q8N814 137 aa3.05□□□□□ -1.92
VPS13A-207ENST00000419472 MUC4Q99102 2169 aa3.05□□□□□ -1.92
VPS13A-207ENST00000419472 LIMD2Q9BT23 127 aa3.05□□□□□ -1.92
VPS13A-207ENST00000419472 RYR2Q92736 4967 aa3.05□□□□□ -1.92
VPS13A-207ENST00000419472 A0A1B0GW54 56 aa3.04□□□□□ -1.92
VPS13A-207ENST00000419472 MT3P25713 68 aa3.04□□□□□ -1.92
VPS13A-207ENST00000419472 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.04□□□□□ -1.92
VPS13A-207ENST00000419472 PDE6GP18545 87 aa3.04□□□□□ -1.92
VPS13A-207ENST00000419472 DEFB131AP59861 70 aa3.04□□□□□ -1.92
VPS13A-207ENST00000419472 FAM74A4Q5TZK3 123 aa3.04□□□□□ -1.92
VPS13A-207ENST00000419472 COX6A2Q02221 97 aa3.03□□□□□ -1.92
VPS13A-207ENST00000419472 ZCCHC13Q8WW36 166 aaKnown RBP3.03□□□□□ -1.92
VPS13A-207ENST00000419472 CDC42SE1Q9NRR8 79 aa3.03□□□□□ -1.92
VPS13A-207ENST00000419472 M0R2N4 97 aa3.03□□□□□ -1.92
VPS13A-207ENST00000419472 KRTAP10-3P60369 221 aa3.03□□□□□ -1.92
VPS13A-207ENST00000419472 Q8NAQ8 132 aa3.02□□□□□ -1.93
VPS13A-207ENST00000419472 WFDC10AQ9H1F0 79 aa3.02□□□□□ -1.93
VPS13A-207ENST00000419472 MOBPQ13875 183 aa3.02□□□□□ -1.93
VPS13A-207ENST00000419472 CDC42SE2Q9NRR3 84 aa3.02□□□□□ -1.93
VPS13A-207ENST00000419472 PRR34Q9NV39 138 aa3.02□□□□□ -1.93
VPS13A-207ENST00000419472 LOC101927531A0A1B0GV80 90 aa3.01□□□□□ -1.93
VPS13A-207ENST00000419472 IGKV4-1P06312 121 aa3.01□□□□□ -1.93
VPS13A-207ENST00000419472 CCL18P55774 89 aa3.01□□□□□ -1.93
VPS13A-207ENST00000419472 TRBV6-4A0A1B0GX49 114 aa3□□□□□ -1.93
VPS13A-207ENST00000419472 C9orf116Q5BN46 136 aaPredicted RBP3□□□□□ -1.93
VPS13A-207ENST00000419472 C4orf3Q8WVX3 66 aa3□□□□□ -1.93
VPS13A-207ENST00000419472 DEFB114Q30KQ6 69 aa3□□□□□ -1.93
VPS13A-207ENST00000419472 KRTAP4-5Q9BYR2 181 aa3□□□□□ -1.93
VPS13A-207ENST00000419472 XAGE1AQ9HD64 81 aa3□□□□□ -1.93
VPS13A-207ENST00000419472 DNAH10OSP0CZ25 163 aa3□□□□□ -1.93
VPS13A-207ENST00000419472 ELOF1P60002 83 aaKnown RBP3□□□□□ -1.93
VPS13A-207ENST00000419472 LINC00467Q9BRT7 94 aa3□□□□□ -1.93
VPS13A-207ENST00000419472 PRR15LQ9BU68 103 aa3□□□□□ -1.93
VPS13A-207ENST00000419472 KIAA1109Q2LD37 5005 aa2.99□□□□□ -1.93
VPS13A-207ENST00000419472 C3orf84H3BNL1 204 aa2.99□□□□□ -1.93
VPS13A-207ENST00000419472 HERC2O95714 4834 aa2.99□□□□□ -1.93
VPS13A-207ENST00000419472 KRTAP1-4P0C5Y4 121 aa2.99□□□□□ -1.93
VPS13A-207ENST00000419472 PRKDCP78527 4128 aaKnown RBP2.98□□□□□ -1.93
VPS13A-207ENST00000419472 Q9BRP9 147 aa2.98□□□□□ -1.93
VPS13A-207ENST00000419472 KRTAP4-11Q9BYQ6 195 aa2.98□□□□□ -1.93
VPS13A-207ENST00000419472 IGLV4-60A0A075B6I1 120 aa2.98□□□□□ -1.93
VPS13A-207ENST00000419472 A0A1B0GU33 70 aa2.98□□□□□ -1.93
VPS13A-207ENST00000419472 LINC00158P58513 81 aa2.98□□□□□ -1.93
VPS13A-207ENST00000419472 R4GN34 69 aa2.98□□□□□ -1.93
VPS13A-207ENST00000419472 NDUFB1O75438 58 aa2.97□□□□□ -1.93
VPS13A-207ENST00000419472 ASB16-AS1Q495Z4 193 aa2.97□□□□□ -1.93
VPS13A-207ENST00000419472 LINC00575Q6W349 94 aa2.97□□□□□ -1.93
VPS13A-207ENST00000419472 COX7B2Q8TF08 81 aa2.97□□□□□ -1.93
VPS13A-207ENST00000419472 Q8N9L7 120 aa2.97□□□□□ -1.93
VPS13A-207ENST00000419472 Q8NDZ9 215 aa2.97□□□□□ -1.93
VPS13A-207ENST00000419472 H3BPC8 53 aa2.96□□□□□ -1.94
VPS13A-207ENST00000419472 KRTAP11-1Q8IUC1 163 aa2.96□□□□□ -1.94
VPS13A-207ENST00000419472 TRGV1A0A0A0MS02 117 aa2.96□□□□□ -1.94
VPS13A-207ENST00000419472 KLK12Q9UKR0 248 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms