RNA–Protein interactions for RNA: ENST00000411767.6

PTPN13-202, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-202ENST00000411767 PRUNE2Q8WUY3 3088 aa2.68□□□□□ -1.98
PTPN13-202ENST00000411767 DNAH14Q0VDD8 3507 aa2.68□□□□□ -1.98
PTPN13-202ENST00000411767 NAV2Q8IVL1 2488 aa2.68□□□□□ -1.98
PTPN13-202ENST00000411767 SPRR1AP35321 89 aa2.67□□□□□ -1.98
PTPN13-202ENST00000411767 KRTAP26-1Q6PEX3 210 aa2.67□□□□□ -1.98
PTPN13-202ENST00000411767 LAMA1P25391 3075 aa2.67□□□□□ -1.98
PTPN13-202ENST00000411767 K7EIL1 84 aa2.67□□□□□ -1.98
PTPN13-202ENST00000411767 EYSQ5T1H1 3165 aa2.66□□□□□ -1.98
PTPN13-202ENST00000411767 RPS29P62273 56 aaKnown RBP2.66□□□□□ -1.98
PTPN13-202ENST00000411767 TNRC18O15417 2968 aaPredicted RBP2.66□□□□□ -1.98
PTPN13-202ENST00000411767 NCOR2Q9Y618 2525 aa2.65□□□□□ -1.99
PTPN13-202ENST00000411767 RIF1Q5UIP0 2472 aaKnown RBP2.65□□□□□ -1.99
PTPN13-202ENST00000411767 A0A0C4DFX4 3053 aa2.65□□□□□ -1.99
PTPN13-202ENST00000411767 KRTAP10-8P60410 259 aa2.64□□□□□ -1.99
PTPN13-202ENST00000411767 WDR87Q6ZQQ6 2873 aa2.64□□□□□ -1.99
PTPN13-202ENST00000411767 FN1P02751 2386 aaKnown RBP2.64□□□□□ -1.99
PTPN13-202ENST00000411767 INE1O15225 51 aa2.64□□□□□ -1.99
PTPN13-202ENST00000411767 KRTAP10-9P60411 292 aa2.63□□□□□ -1.99
PTPN13-202ENST00000411767 KRTAP4-16G5E9R7 235 aaPredicted RBP2.63□□□□□ -1.99
PTPN13-202ENST00000411767 ANKHD1Q8IWZ3 2542 aaKnown RBP2.62□□□□□ -1.99
PTPN13-202ENST00000411767 VCANP13611 3396 aa2.61□□□□□ -1.99
PTPN13-202ENST00000411767 PIEZO1Q92508 2521 aa2.6□□□□□ -1.99
PTPN13-202ENST00000411767 KRTAP10-11P60412 298 aa2.6□□□□□ -1.99
PTPN13-202ENST00000411767 BDP1A6H8Y1 2624 aa2.6□□□□□ -1.99
PTPN13-202ENST00000411767 KRTAP23-1A1A580 65 aa2.6□□□□□ -1.99
PTPN13-202ENST00000411767 VPS13AQ96RL7 3174 aa2.59□□□□□ -1.99
PTPN13-202ENST00000411767 USP34Q70CQ2 3546 aa2.59□□□□□ -1.99
PTPN13-202ENST00000411767 PTPN13Q12923 2485 aa2.59□□□□□ -1.99
PTPN13-202ENST00000411767 PKD1L2Q7Z442 2459 aa2.59□□□□□ -2
PTPN13-202ENST00000411767 EPG5Q9HCE0 2579 aa2.59□□□□□ -2
PTPN13-202ENST00000411767 SPEGQ15772 3267 aa2.58□□□□□ -2
PTPN13-202ENST00000411767 SPENQ96T58 3664 aaKnown RBP2.58□□□□□ -2
PTPN13-202ENST00000411767 FRYLO94915 3013 aa2.58□□□□□ -2
PTPN13-202ENST00000411767 COL6A3P12111 3177 aa2.57□□□□□ -2
PTPN13-202ENST00000411767 MYO15AQ9UKN7 3530 aa2.57□□□□□ -2
PTPN13-202ENST00000411767 CFAP54Q96N23 3096 aa2.57□□□□□ -2
PTPN13-202ENST00000411767 LRRK2Q5S007 2527 aa2.56□□□□□ -2
PTPN13-202ENST00000411767 MUC3AQ02505 3323 aa2.56□□□□□ -2
PTPN13-202ENST00000411767 ZFHX3Q15911 3703 aa2.56□□□□□ -2
PTPN13-202ENST00000411767 WDFY3Q8IZQ1 3526 aa2.55□□□□□ -2
PTPN13-202ENST00000411767 ZFHX4Q86UP3 3567 aa2.54□□□□□ -2
PTPN13-202ENST00000411767 KRTAP29-1A8MX34 341 aaPredicted RBP2.53□□□□□ -2
PTPN13-202ENST00000411767 DMDP11532 3685 aa2.53□□□□□ -2
PTPN13-202ENST00000411767 WDFY4Q6ZS81 3184 aa2.53□□□□□ -2
PTPN13-202ENST00000411767 CYSTM1Q9H1C7 97 aa2.53□□□□□ -2
PTPN13-202ENST00000411767 MYO18BQ8IUG5 2567 aa2.53□□□□□ -2
PTPN13-202ENST00000411767 PRRC2CQ9Y520 2896 aaKnown RBP2.52□□□□□ -2.01
PTPN13-202ENST00000411767 ZNF292O60281 2723 aa2.52□□□□□ -2.01
PTPN13-202ENST00000411767 CACNA1AO00555 2505 aa2.52□□□□□ -2.01
PTPN13-202ENST00000411767 FREM2Q5SZK8 3169 aa2.51□□□□□ -2.01
PTPN13-202ENST00000411767 Q6ZRN7 208 aaPredicted RBP2.51□□□□□ -2.01
PTPN13-202ENST00000411767 LCE6AA0A183 80 aa2.5□□□□□ -2.01
PTPN13-202ENST00000411767 MUC6Q6W4X9 2439 aa2.5□□□□□ -2.01
PTPN13-202ENST00000411767 FRYQ5TBA9 3013 aa2.49□□□□□ -2.01
PTPN13-202ENST00000411767 NOTCH2Q04721 2471 aa2.49□□□□□ -2.01
PTPN13-202ENST00000411767 LOC400499M0QZD8 3231 aa2.48□□□□□ -2.01
PTPN13-202ENST00000411767 DSPP15924 2871 aaKnown RBP2.48□□□□□ -2.01
PTPN13-202ENST00000411767 CELSR3Q9NYQ7 3312 aa2.48□□□□□ -2.01
PTPN13-202ENST00000411767 KRTAP12-2P59991 146 aa2.47□□□□□ -2.01
PTPN13-202ENST00000411767 DMXL1Q9Y485 3027 aa2.47□□□□□ -2.01
PTPN13-202ENST00000411767 ANKRD11Q6UB99 2663 aaPredicted RBP2.47□□□□□ -2.01
PTPN13-202ENST00000411767 TLN1Q9Y490 2541 aaKnown RBP2.46□□□□□ -2.02
PTPN13-202ENST00000411767 DMBT1Q9UGM3 2413 aaPredicted RBP2.45□□□□□ -2.02
PTPN13-202ENST00000411767 CFAP47Q6ZTR5 3102 aa2.45□□□□□ -2.02
PTPN13-202ENST00000411767 MGAQ8IWI9 3026 aa2.45□□□□□ -2.02
PTPN13-202ENST00000411767 KRTAP10-10P60014 251 aa2.45□□□□□ -2.02
PTPN13-202ENST00000411767 KRTAP13-2Q52LG2 175 aa2.45□□□□□ -2.02
PTPN13-202ENST00000411767 TLN2Q9Y4G6 2542 aa2.44□□□□□ -2.02
PTPN13-202ENST00000411767 KRTAP10-1P60331 282 aa2.44□□□□□ -2.02
PTPN13-202ENST00000411767 AKAP13Q12802 2813 aa2.44□□□□□ -2.02
PTPN13-202ENST00000411767 BOD1L1Q8NFC6 3051 aa2.43□□□□□ -2.02
PTPN13-202ENST00000411767 NBEAQ8NFP9 2946 aa2.43□□□□□ -2.02
PTPN13-202ENST00000411767 ZFHX2Q9C0A1 2572 aaPredicted RBP2.43□□□□□ -2.02
PTPN13-202ENST00000411767 MTORP42345 2549 aa2.43□□□□□ -2.02
PTPN13-202ENST00000411767 CEP295Q9C0D2 2601 aa2.42□□□□□ -2.02
PTPN13-202ENST00000411767 KRTAP15-1Q3LI76 137 aa2.42□□□□□ -2.02
PTPN13-202ENST00000411767 ATMQ13315 3056 aa2.42□□□□□ -2.02
PTPN13-202ENST00000411767 RELNP78509 3460 aa2.42□□□□□ -2.02
PTPN13-202ENST00000411767 BSNQ9UPA5 3926 aa2.42□□□□□ -2.02
PTPN13-202ENST00000411767 DMXL2Q8TDJ6 3036 aa2.42□□□□□ -2.02
PTPN13-202ENST00000411767 PIEZO2Q9H5I5 2752 aa2.42□□□□□ -2.02
PTPN13-202ENST00000411767 KRTAP10-6P60371 365 aaPredicted RBP2.41□□□□□ -2.02
PTPN13-202ENST00000411767 ASPMQ8IZT6 3477 aa2.41□□□□□ -2.02
PTPN13-202ENST00000411767 ADGRG4Q8IZF6 3080 aa2.4□□□□□ -2.02
PTPN13-202ENST00000411767 DCHS1Q96JQ0 3298 aa2.4□□□□□ -2.03
PTPN13-202ENST00000411767 SPTBN4Q9H254 2564 aa2.4□□□□□ -2.03
PTPN13-202ENST00000411767 KRTAP13-4Q3LI77 160 aa2.39□□□□□ -2.03
PTPN13-202ENST00000411767 LAMA5O15230 3695 aa2.39□□□□□ -2.03
PTPN13-202ENST00000411767 KRTAP10-3P60369 221 aa2.39□□□□□ -2.03
PTPN13-202ENST00000411767 IGF2RP11717 2491 aa2.39□□□□□ -2.03
PTPN13-202ENST00000411767 H0YAA0 97 aa2.38□□□□□ -2.03
PTPN13-202ENST00000411767 KALRNO60229 2985 aa2.38□□□□□ -2.03
PTPN13-202ENST00000411767 ZFYVE26Q68DK2 2539 aa2.37□□□□□ -2.03
PTPN13-202ENST00000411767 POLQO75417 2590 aa2.37□□□□□ -2.03
PTPN13-202ENST00000411767 HRNRQ86YZ3 2850 aaPredicted RBP2.36□□□□□ -2.03
PTPN13-202ENST00000411767 KRTAP10-2P60368 255 aa2.36□□□□□ -2.03
PTPN13-202ENST00000411767 CHD8Q9HCK8 2581 aa2.35□□□□□ -2.03
PTPN13-202ENST00000411767 DCHS2Q6V1P9 2916 aa2.35□□□□□ -2.03
PTPN13-202ENST00000411767 TACC2O95359 2948 aa2.35□□□□□ -2.03
PTPN13-202ENST00000411767 A0A1B0GVY2 172 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms