RNA–Protein interactions for RNA: ENST00000216414.12

CDKN3-201, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 1 (best)

Gene CDKN3, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-201ENST00000216414 MTORP42345 2549 aa0.1□□□□□ -2.39
CDKN3-201ENST00000216414 VWFP04275 2813 aa0.09□□□□□ -2.39
CDKN3-201ENST00000216414 LAMC1P11047 1609 aa0.09□□□□□ -2.39
CDKN3-201ENST00000216414 EIF2AK4Q9P2K8 1649 aaKnown RBP0.09□□□□□ -2.39
CDKN3-201ENST00000216414 HRNRQ86YZ3 2850 aaPredicted RBP0.09□□□□□ -2.39
CDKN3-201ENST00000216414 SYNE1Q8NF91 8797 aaKnown RBP0.09□□□□□ -2.39
CDKN3-201ENST00000216414 LINC01546A6NGU7 62 aa0.09□□□□□ -2.4
CDKN3-201ENST00000216414 M0R1W7 72 aa0.09□□□□□ -2.4
CDKN3-201ENST00000216414 DEFB130BP0DP73 79 aa0.09□□□□□ -2.4
CDKN3-201ENST00000216414 DEFB130AP0DP74 79 aa0.09□□□□□ -2.4
CDKN3-201ENST00000216414 DEFB131AP59861 70 aa0.09□□□□□ -2.4
CDKN3-201ENST00000216414 S4R3F8 94 aa0.09□□□□□ -2.4
CDKN3-201ENST00000216414 SPTBN4Q9H254 2564 aa0.09□□□□□ -2.4
CDKN3-201ENST00000216414 CDC42BPGQ6DT37 1551 aa0.09□□□□□ -2.4
CDKN3-201ENST00000216414 CHD6Q8TD26 2715 aa0.09□□□□□ -2.4
CDKN3-201ENST00000216414 POLR1AO95602 1720 aaPredicted RBP0.09□□□□□ -2.4
CDKN3-201ENST00000216414 UBR1Q8IWV7 1749 aa0.09□□□□□ -2.4
CDKN3-201ENST00000216414 TRANK1O15050 2925 aa0.09□□□□□ -2.4
CDKN3-201ENST00000216414 MED14O60244 1454 aa0.09□□□□□ -2.4
CDKN3-201ENST00000216414 COL4A6Q14031 1691 aa0.08□□□□□ -2.4
CDKN3-201ENST00000216414 PLCH1Q4KWH8 1693 aa0.08□□□□□ -2.4
CDKN3-201ENST00000216414 ZC3H13Q5T200 1668 aaKnown RBP0.08□□□□□ -2.4
CDKN3-201ENST00000216414 EFCAB5A4FU69 1503 aa0.08□□□□□ -2.4
CDKN3-201ENST00000216414 ABCC6O95255 1503 aa0.08□□□□□ -2.4
CDKN3-201ENST00000216414 UGGT2Q9NYU1 1516 aa0.08□□□□□ -2.4
CDKN3-201ENST00000216414 ACACAQ13085 2346 aa0.08□□□□□ -2.4
CDKN3-201ENST00000216414 C4AP0C0L4 1744 aa0.08□□□□□ -2.4
CDKN3-201ENST00000216414 C4BP0C0L5 1744 aa0.08□□□□□ -2.4
CDKN3-201ENST00000216414 PLXNC1O60486 1568 aa0.08□□□□□ -2.4
CDKN3-201ENST00000216414 DIP2BQ9P265 1576 aa0.08□□□□□ -2.4
CDKN3-201ENST00000216414 IGLV5-48A0A075B6I7 105 aa0.08□□□□□ -2.4
CDKN3-201ENST00000216414 KRTAP2-3P0C7H8 128 aa0.08□□□□□ -2.4
CDKN3-201ENST00000216414 SFTA3P0C7M3 94 aa0.08□□□□□ -2.4
CDKN3-201ENST00000216414 SPRR2AP35326 72 aa0.08□□□□□ -2.4
CDKN3-201ENST00000216414 TDRG1Q3Y452 100 aa0.08□□□□□ -2.4
CDKN3-201ENST00000216414 WFDC10BQ8IUB3 73 aa0.08□□□□□ -2.4
CDKN3-201ENST00000216414 LINC00308Q8TCZ7 52 aa0.08□□□□□ -2.4
CDKN3-201ENST00000216414 KRTAP2-4Q9BYR9 128 aa0.08□□□□□ -2.4
CDKN3-201ENST00000216414 KRTAP2-1Q9BYU5 128 aa0.08□□□□□ -2.4
CDKN3-201ENST00000216414 CMC2Q9NRP2 79 aa0.08□□□□□ -2.4
CDKN3-201ENST00000216414 HILPDAQ9Y5L2 63 aa0.08□□□□□ -2.4
CDKN3-201ENST00000216414 SETD2Q9BYW2 2564 aaPredicted RBP0.08□□□□□ -2.4
CDKN3-201ENST00000216414 TMEM131LA2VDJ0 1609 aa0.08□□□□□ -2.4
CDKN3-201ENST00000216414 USP32Q8NFA0 1604 aa0.08□□□□□ -2.4
CDKN3-201ENST00000216414 CD163L1Q9NR16 1453 aa0.08□□□□□ -2.4
CDKN3-201ENST00000216414 HECTD1Q9ULT8 2610 aa0.08□□□□□ -2.4
CDKN3-201ENST00000216414 MXRA5Q9NR99 2828 aa0.08□□□□□ -2.4
CDKN3-201ENST00000216414 ANKRD11Q6UB99 2663 aaPredicted RBP0.08□□□□□ -2.4
CDKN3-201ENST00000216414 NHSQ6T4R5 1651 aa0.08□□□□□ -2.4
CDKN3-201ENST00000216414 EPG5Q9HCE0 2579 aa0.07□□□□□ -2.4
CDKN3-201ENST00000216414 RICTORQ6R327 1708 aa0.07□□□□□ -2.4
CDKN3-201ENST00000216414 UTP20O75691 2785 aaKnown RBP0.07□□□□□ -2.4
CDKN3-201ENST00000216414 TGP01266 2768 aa0.07□□□□□ -2.4
CDKN3-201ENST00000216414 INO80Q9ULG1 1556 aaPredicted RBP0.07□□□□□ -2.4
CDKN3-201ENST00000216414 A0A1B0GUL6 1792 aa0.07□□□□□ -2.4
CDKN3-201ENST00000216414 ANKRD36CQ5JPF3 1778 aa0.07□□□□□ -2.4
CDKN3-201ENST00000216414 CACNA1AO00555 2505 aa0.07□□□□□ -2.4
CDKN3-201ENST00000216414 LRRK2Q5S007 2527 aa0.07□□□□□ -2.4
CDKN3-201ENST00000216414 PREX2Q70Z35 1606 aa0.07□□□□□ -2.4
CDKN3-201ENST00000216414 PRM1P04553 51 aa0.07□□□□□ -2.4
CDKN3-201ENST00000216414 CRIP1P50238 77 aa0.07□□□□□ -2.4
CDKN3-201ENST00000216414 DEFB1P60022 68 aa0.07□□□□□ -2.4
CDKN3-201ENST00000216414 SMIM2Q9BVW6 85 aa0.07□□□□□ -2.4
CDKN3-201ENST00000216414 KAAG1Q9UBP8 84 aa0.07□□□□□ -2.4
CDKN3-201ENST00000216414 PDZD2O15018 2839 aa0.07□□□□□ -2.4
CDKN3-201ENST00000216414 NF1P21359 2839 aa0.07□□□□□ -2.4
CDKN3-201ENST00000216414 CEP290O15078 2479 aa0.07□□□□□ -2.4
CDKN3-201ENST00000216414 CPS1P31327 1500 aa0.07□□□□□ -2.4
CDKN3-201ENST00000216414 ABCA10Q8WWZ4 1543 aa0.07□□□□□ -2.4
CDKN3-201ENST00000216414 RGPD1P0DJD0 1748 aa0.07□□□□□ -2.4
CDKN3-201ENST00000216414 MYO5CQ9NQX4 1742 aa0.07□□□□□ -2.4
CDKN3-201ENST00000216414 ZFHX3Q15911 3703 aa0.07□□□□□ -2.4
CDKN3-201ENST00000216414 NBASA2RRP1 2371 aa0.06□□□□□ -2.4
CDKN3-201ENST00000216414 RNF17Q9BXT8 1623 aaKnown RBP0.06□□□□□ -2.4
CDKN3-201ENST00000216414 PKD1L2Q7Z442 2459 aa0.06□□□□□ -2.4
CDKN3-201ENST00000216414 WIZO95785 1651 aa0.06□□□□□ -2.4
CDKN3-201ENST00000216414 KIF1AQ12756 1690 aa0.06□□□□□ -2.4
CDKN3-201ENST00000216414 FASNP49327 2511 aaKnown RBP0.06□□□□□ -2.4
CDKN3-201ENST00000216414 FRAS1Q86XX4 4008 aa0.06□□□□□ -2.4
CDKN3-201ENST00000216414 STAB1Q9NY15 2570 aa0.06□□□□□ -2.4
CDKN3-201ENST00000216414 DOT1LQ8TEK3 1739 aa0.06□□□□□ -2.4
CDKN3-201ENST00000216414 PARP4Q9UKK3 1724 aaKnown RBP0.06□□□□□ -2.4
CDKN3-201ENST00000216414 DIP2AQ14689 1571 aa0.06□□□□□ -2.4
CDKN3-201ENST00000216414 NBEAQ8NFP9 2946 aa0.06□□□□□ -2.4
CDKN3-201ENST00000216414 MGAM2Q2M2H8 2515 aa0.06□□□□□ -2.4
CDKN3-201ENST00000216414 SRRM2Q9UQ35 2752 aaKnown RBP0.06□□□□□ -2.4
CDKN3-201ENST00000216414 ABCA6Q8N139 1617 aa0.05□□□□□ -2.4
CDKN3-201ENST00000216414 CCDC180Q9P1Z9 1646 aa0.05□□□□□ -2.4
CDKN3-201ENST00000216414 AKAP13Q12802 2813 aa0.05□□□□□ -2.4
CDKN3-201ENST00000216414 C3P01024 1663 aa0.05□□□□□ -2.4
CDKN3-201ENST00000216414 PRRC2CQ9Y520 2896 aaKnown RBP0.05□□□□□ -2.4
CDKN3-201ENST00000216414 PRXQ9BXM0 1461 aa0.05□□□□□ -2.4
CDKN3-201ENST00000216414 TOGARAM1Q9Y4F4 1720 aa0.05□□□□□ -2.4
CDKN3-201ENST00000216414 TENM2Q9NT68 2774 aa0.05□□□□□ -2.4
CDKN3-201ENST00000216414 ANKHD1Q8IWZ3 2542 aaKnown RBP0.05□□□□□ -2.4
CDKN3-201ENST00000216414 AGLP35573 1532 aa0.05□□□□□ -2.4
CDKN3-201ENST00000216414 H0YAA0 97 aa0.05□□□□□ -2.4
CDKN3-201ENST00000216414 RPS27P42677 84 aaKnown RBP0.05□□□□□ -2.4
CDKN3-201ENST00000216414 KRTAP6-1Q3LI64 71 aa0.05□□□□□ -2.4
CDKN3-201ENST00000216414 LELP1Q5T871 98 aa0.05□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms