RNA–Protein interactions for RNA: ENSMUST00000098548.7

Scn1b-201, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scn1b, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-201ENSMUST00000098548 IcosQ9WVS0 200 aa17.47■□□□□ 0.39
Scn1b-201ENSMUST00000098548 Duxbl2Q7TNE6 350 aa17.46■□□□□ 0.39
Scn1b-201ENSMUST00000098548 Olfr745Q7TRL9 328 aa17.46■□□□□ 0.39
Scn1b-201ENSMUST00000098548 Mapk1ip1lQ8BH93 242 aa17.46■□□□□ 0.39
Scn1b-201ENSMUST00000098548 4930474N05RikQ8BVR5 218 aa17.46■□□□□ 0.39
Scn1b-201ENSMUST00000098548 Mrpl33Q9CQP0 65 aa17.46■□□□□ 0.39
Scn1b-201ENSMUST00000098548 SNORCQ9CXL7 121 aa17.46■□□□□ 0.39
Scn1b-201ENSMUST00000098548 Urm1Q9D2P4 101 aa17.46■□□□□ 0.39
Scn1b-201ENSMUST00000098548 Trdv1A0A075B657 112 aa17.45■□□□□ 0.38
Scn1b-201ENSMUST00000098548 DdtO35215 118 aa17.45■□□□□ 0.38
Scn1b-201ENSMUST00000098548 CampP51437 172 aa17.45■□□□□ 0.38
Scn1b-201ENSMUST00000098548 Olfr481Q8VGI5 312 aa17.45■□□□□ 0.38
Scn1b-201ENSMUST00000098548 CrygbP04344 175 aa17.45■□□□□ 0.38
Scn1b-201ENSMUST00000098548 Rpl15Q9CZM2 204 aaKnown RBP17.45■□□□□ 0.38
Scn1b-201ENSMUST00000098548 Tcrg-C2A0A075B5Z2 167 aa17.44■□□□□ 0.38
Scn1b-201ENSMUST00000098548 P01853 167 aa17.44■□□□□ 0.38
Scn1b-201ENSMUST00000098548 Olfr1537P34983 314 aa17.44■□□□□ 0.38
Scn1b-201ENSMUST00000098548 Ifna11Q61716 190 aa17.44■□□□□ 0.38
Scn1b-201ENSMUST00000098548 Gng5Q80SZ7 68 aa17.44■□□□□ 0.38
Scn1b-201ENSMUST00000098548 Gm21874J3QNZ6 232 aa17.43■□□□□ 0.38
Scn1b-201ENSMUST00000098548 SnrpeP62305 92 aaKnown RBP17.43■□□□□ 0.38
Scn1b-201ENSMUST00000098548 Trp53rkaQ5U452 244 aa17.43■□□□□ 0.38
Scn1b-201ENSMUST00000098548 Defb10Q8R2I8 73 aa17.43■□□□□ 0.38
Scn1b-201ENSMUST00000098548 Tp53rkQ99PW4 244 aa17.43■□□□□ 0.38
Scn1b-201ENSMUST00000098548 Hyls1Q9CXX0 307 aa17.43■□□□□ 0.38
Scn1b-201ENSMUST00000098548 Irf2bp2E9Q1P8 570 aa17.42■□□□□ 0.38
Scn1b-201ENSMUST00000098548 Olfr556E9Q549 324 aa17.42■□□□□ 0.38
Scn1b-201ENSMUST00000098548 C130073F10RikQ8C4L8 201 aa17.42■□□□□ 0.38
Scn1b-201ENSMUST00000098548 Tm2d1Q99MB3 208 aa17.42■□□□□ 0.38
Scn1b-201ENSMUST00000098548 Tmem239Q9DA47 151 aa17.42■□□□□ 0.38
Scn1b-201ENSMUST00000098548 Tomm40Q9QYA2 361 aa17.42■□□□□ 0.38
Scn1b-201ENSMUST00000098548 Arl3Q9WUL7 182 aa17.42■□□□□ 0.38
Scn1b-201ENSMUST00000098548 Hivep1Q03172 2688 aa17.42■□□□□ 0.38
Scn1b-201ENSMUST00000098548 Socs3O35718 225 aa17.41■□□□□ 0.38
Scn1b-201ENSMUST00000098548 Fgf5P15656 264 aa17.41■□□□□ 0.38
Scn1b-201ENSMUST00000098548 Tpt1P63028 172 aaKnown RBP17.41■□□□□ 0.38
Scn1b-201ENSMUST00000098548 Gm5150Q1AN92 299 aa17.41■□□□□ 0.38
Scn1b-201ENSMUST00000098548 OpalinQ7M750 143 aa17.41■□□□□ 0.38
Scn1b-201ENSMUST00000098548 Gm9961Q8BNV2 113 aa17.41■□□□□ 0.38
Scn1b-201ENSMUST00000098548 Prelid1Q8R107 217 aa17.41■□□□□ 0.38
Scn1b-201ENSMUST00000098548 V1ra8Q9EQ48 279 aa17.41■□□□□ 0.38
Scn1b-201ENSMUST00000098548 Vamp5Q9Z2P8 102 aa17.41■□□□□ 0.38
Scn1b-201ENSMUST00000098548 Trav7-4A0A075B6C1 113 aa17.4■□□□□ 0.38
Scn1b-201ENSMUST00000098548 Olfr715bE9Q725 315 aa17.4■□□□□ 0.38
Scn1b-201ENSMUST00000098548 RprmlQ3URD2 117 aa17.4■□□□□ 0.38
Scn1b-201ENSMUST00000098548 Trav7d-4Q5R1H9 113 aa17.4■□□□□ 0.38
Scn1b-201ENSMUST00000098548 Btf3Q64152 204 aaKnown RBP17.4■□□□□ 0.38
Scn1b-201ENSMUST00000098548 Olfr715Q8VG49 315 aa17.4■□□□□ 0.38
Scn1b-201ENSMUST00000098548 Psmg3Q9CZH3 122 aa17.4■□□□□ 0.38
Scn1b-201ENSMUST00000098548 Dazap1Q9JII5 406 aaKnown RBP17.4■□□□□ 0.38
Scn1b-201ENSMUST00000098548 Tmem183Q9JJB9 375 aa17.4■□□□□ 0.38
Scn1b-201ENSMUST00000098548 Tcte2E9PY37 120 aa17.4■□□□□ 0.38
Scn1b-201ENSMUST00000098548 Gpm6bP35803 328 aa17.4■□□□□ 0.38
Scn1b-201ENSMUST00000098548 Zfp979A2A799 407 aa17.39■□□□□ 0.37
Scn1b-201ENSMUST00000098548 Cldn34c4A2ANA3 212 aa17.39■□□□□ 0.37
Scn1b-201ENSMUST00000098548 Gm10521E9PZK0 135 aa17.39■□□□□ 0.37
Scn1b-201ENSMUST00000098548 Hist1h2bmP10854 126 aa17.39■□□□□ 0.37
Scn1b-201ENSMUST00000098548 Saa4P31532 130 aa17.39■□□□□ 0.37
Scn1b-201ENSMUST00000098548 Hist1h2bhQ64478 126 aa17.39■□□□□ 0.37
Scn1b-201ENSMUST00000098548 Hist2h2bbQ64525 126 aa17.39■□□□□ 0.37
Scn1b-201ENSMUST00000098548 Onecut2Q6XBJ3 505 aa17.39■□□□□ 0.37
Scn1b-201ENSMUST00000098548 Hist1h2bcQ6ZWY9 126 aaKnown RBP17.39■□□□□ 0.37
Scn1b-201ENSMUST00000098548 Tmed6Q9CQG0 239 aa17.39■□□□□ 0.37
Scn1b-201ENSMUST00000098548 Bub3Q9WVA3 326 aa17.39■□□□□ 0.37
Scn1b-201ENSMUST00000098548 Shisal2aA2A9G7 189 aa17.38■□□□□ 0.37
Scn1b-201ENSMUST00000098548 SelplgQ62170 397 aa17.38■□□□□ 0.37
Scn1b-201ENSMUST00000098548 Olfr1373Q7TQT6 311 aa17.38■□□□□ 0.37
Scn1b-201ENSMUST00000098548 Olfr403Q7TRX2 313 aa17.38■□□□□ 0.37
Scn1b-201ENSMUST00000098548 Olfr984Q8VFN1 314 aa17.38■□□□□ 0.37
Scn1b-201ENSMUST00000098548 BlnkQ9QUN3 457 aa17.38■□□□□ 0.37
Scn1b-201ENSMUST00000098548 Obox8V9GWY9 217 aa17.38■□□□□ 0.37
Scn1b-201ENSMUST00000098548 Gstp1P19157 210 aa17.37■□□□□ 0.37
Scn1b-201ENSMUST00000098548 Tnfrsf9P20334 256 aa17.37■□□□□ 0.37
Scn1b-201ENSMUST00000098548 Tmem91Q8C581 172 aa17.37■□□□□ 0.37
Scn1b-201ENSMUST00000098548 Tcrg-V6A0A075B5Y8 134 aa17.36■□□□□ 0.37
Scn1b-201ENSMUST00000098548 Trav16A0A075B653 116 aa17.36■□□□□ 0.37
Scn1b-201ENSMUST00000098548 Gm5878E9PUB3 99 aa17.36■□□□□ 0.37
Scn1b-201ENSMUST00000098548 Twist1P26687 206 aa17.36■□□□□ 0.37
Scn1b-201ENSMUST00000098548 Olfr904Q7TRC9 310 aa17.36■□□□□ 0.37
Scn1b-201ENSMUST00000098548 Shisal2bQ9D1Y9 158 aa17.36■□□□□ 0.37
Scn1b-201ENSMUST00000098548 Tnfrsf13cQ9D8D0 175 aa17.36■□□□□ 0.37
Scn1b-201ENSMUST00000098548 Olfr1191-ps1A0A1L1STD5 311 aa17.36■□□□□ 0.37
Scn1b-201ENSMUST00000098548 Tmem141A2AJB2 108 aa17.36■□□□□ 0.37
Scn1b-201ENSMUST00000098548 Gm10036E9PYL9 178 aaKnown RBP17.36■□□□□ 0.37
Scn1b-201ENSMUST00000098548 Olfr1380Q7TQT5 311 aa17.36■□□□□ 0.37
Scn1b-201ENSMUST00000098548 Ifi27Q8C6G0 260 aa17.36■□□□□ 0.37
Scn1b-201ENSMUST00000098548 Shisa9Q9CZN4 424 aa17.36■□□□□ 0.37
Scn1b-201ENSMUST00000098548 Olfr1293-psA0A1L1SVB5 326 aa17.35■□□□□ 0.37
Scn1b-201ENSMUST00000098548 Hoxa5P09021 270 aa17.35■□□□□ 0.37
Scn1b-201ENSMUST00000098548 Ang2Q64438 145 aa17.35■□□□□ 0.37
Scn1b-201ENSMUST00000098548 Olfr1402Q8VET1 320 aa17.35■□□□□ 0.37
Scn1b-201ENSMUST00000098548 Sorl1O88307 2215 aaKnown RBP17.34■□□□□ 0.37
Scn1b-201ENSMUST00000098548 Gm4565A0A140LJ87 301 aa17.34■□□□□ 0.37
Scn1b-201ENSMUST00000098548 Gm15056F6ZR08 88 aa17.34■□□□□ 0.37
Scn1b-201ENSMUST00000098548 S100a10P08207 97 aa17.34■□□□□ 0.37
Scn1b-201ENSMUST00000098548 AW146154Q3TPQ7 468 aa17.34■□□□□ 0.37
Scn1b-201ENSMUST00000098548 Smim9Q3V0X1 137 aa17.34■□□□□ 0.37
Scn1b-201ENSMUST00000098548 A130051J06RikQ8CAU1 227 aa17.34■□□□□ 0.37
Scn1b-201ENSMUST00000098548 Olfr982Q8VGB3 321 aa17.34■□□□□ 0.37
Scn1b-201ENSMUST00000098548 Ighv1-53A0A075B5W3 117 aa17.33■□□□□ 0.37
Retrieved 100 of 22,080 RNA–protein pairs in 30.1 ms