RNA–Protein interactions for RNA: ENSMUST00000061628.6

Pcdh20-201, Transcript of Protocadherin-20, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh20, Length 5,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20-201ENSMUST00000061628 Gm37388A0A0A6YY46 143 aa11.95□□□□□ -0.5
Pcdh20-201ENSMUST00000061628 P01741 114 aa11.95□□□□□ -0.5
Pcdh20-201ENSMUST00000061628 Gm16686Q3UMN9 131 aa11.95□□□□□ -0.5
Pcdh20-201ENSMUST00000061628 Tmem190Q9D2E9 166 aa11.95□□□□□ -0.5
Pcdh20-201ENSMUST00000061628 Mapk1ip1Q9D7G9 263 aa11.95□□□□□ -0.5
Pcdh20-201ENSMUST00000061628 Nup214Q80U93 2085 aa11.95□□□□□ -0.5
Pcdh20-201ENSMUST00000061628 Lsm4Q9QXA5 137 aaKnown RBP11.95□□□□□ -0.5
Pcdh20-201ENSMUST00000061628 Trav6d-7A0A075B6B0 112 aa11.94□□□□□ -0.5
Pcdh20-201ENSMUST00000061628 Gm20517G3UVU6 152 aa11.94□□□□□ -0.5
Pcdh20-201ENSMUST00000061628 Spink1P09036 80 aa11.94□□□□□ -0.5
Pcdh20-201ENSMUST00000061628 Tmem256Q5F285 113 aa11.94□□□□□ -0.5
Pcdh20-201ENSMUST00000061628 Gdf15Q9Z0J7 303 aa11.94□□□□□ -0.5
Pcdh20-201ENSMUST00000061628 Gm20379A0A087WR34 119 aa11.94□□□□□ -0.5
Pcdh20-201ENSMUST00000061628 Id3P41133 119 aa11.94□□□□□ -0.5
Pcdh20-201ENSMUST00000061628 Dph3Q8K0W9 82 aa11.94□□□□□ -0.5
Pcdh20-201ENSMUST00000061628 Tomm7Q9D173 55 aa11.94□□□□□ -0.5
Pcdh20-201ENSMUST00000061628 Trav7-1A0A0G2JEV5 112 aa11.94□□□□□ -0.5
Pcdh20-201ENSMUST00000061628 Igkv19-93A0A0G2JFZ3 115 aa11.94□□□□□ -0.5
Pcdh20-201ENSMUST00000061628 Defa2P28309 93 aa11.94□□□□□ -0.5
Pcdh20-201ENSMUST00000061628 Tdgf1P51865 171 aa11.94□□□□□ -0.5
Pcdh20-201ENSMUST00000061628 Atp6v0e1Q9CQD8 81 aa11.94□□□□□ -0.5
Pcdh20-201ENSMUST00000061628 IappP12968 93 aa11.94□□□□□ -0.5
Pcdh20-201ENSMUST00000061628 Morn3Q8C5T4 241 aa11.94□□□□□ -0.5
Pcdh20-201ENSMUST00000061628 Cd300eQ8K249 196 aa11.94□□□□□ -0.5
Pcdh20-201ENSMUST00000061628 Ube2v1Q9CZY3 147 aa11.94□□□□□ -0.5
Pcdh20-201ENSMUST00000061628 Clec5aQ9R007 190 aa11.94□□□□□ -0.5
Pcdh20-201ENSMUST00000061628 Ighv5-6A0A075B5Q0 117 aa11.94□□□□□ -0.5
Pcdh20-201ENSMUST00000061628 Ighv8-2A0A0A6YW58 119 aa11.94□□□□□ -0.5
Pcdh20-201ENSMUST00000061628 Gm5089A1L3C8 106 aa11.94□□□□□ -0.5
Pcdh20-201ENSMUST00000061628 P18528 98 aa11.94□□□□□ -0.5
Pcdh20-201ENSMUST00000061628 Ube2e1P52482 193 aa11.94□□□□□ -0.5
Pcdh20-201ENSMUST00000061628 Gm10192Q3V0S1 108 aa11.94□□□□□ -0.5
Pcdh20-201ENSMUST00000061628 Zfp248Q640N4 576 aa11.94□□□□□ -0.5
Pcdh20-201ENSMUST00000061628 Fstl3Q9EQC7 256 aa11.94□□□□□ -0.5
Pcdh20-201ENSMUST00000061628 Gpx1P11352 201 aa11.93□□□□□ -0.5
Pcdh20-201ENSMUST00000061628 Chac1Q8R3J5 223 aa11.93□□□□□ -0.5
Pcdh20-201ENSMUST00000061628 Gm4064A0A087WR82 380 aa11.93□□□□□ -0.5
Pcdh20-201ENSMUST00000061628 Ighv1-69A0A0G2JFS5 117 aa11.93□□□□□ -0.5
Pcdh20-201ENSMUST00000061628 Gm10352B2RWR6 380 aa11.93□□□□□ -0.5
Pcdh20-201ENSMUST00000061628 Gm21693J3QK27 380 aa11.93□□□□□ -0.5
Pcdh20-201ENSMUST00000061628 Rbmy1a1O35698 380 aa11.93□□□□□ -0.5
Pcdh20-201ENSMUST00000061628 Defa7P50705 93 aa11.93□□□□□ -0.5
Pcdh20-201ENSMUST00000061628 SbpP15501 199 aa11.93□□□□□ -0.5
Pcdh20-201ENSMUST00000061628 Defa-rs2P17534 91 aa11.93□□□□□ -0.5
Pcdh20-201ENSMUST00000061628 Foxf1Q61080 378 aa11.92□□□□□ -0.5
Pcdh20-201ENSMUST00000061628 Ear14F6YUX7 155 aa11.92□□□□□ -0.5
Pcdh20-201ENSMUST00000061628 Foxl2O88470 375 aa11.92□□□□□ -0.5
Pcdh20-201ENSMUST00000061628 Zfp36l1P23950 338 aa11.92□□□□□ -0.5
Pcdh20-201ENSMUST00000061628 Plxna3P70208 1872 aa11.92□□□□□ -0.5
Pcdh20-201ENSMUST00000061628 Gm2564F6Z9S8 108 aa11.92□□□□□ -0.5
Pcdh20-201ENSMUST00000061628 Ccl19O70460 108 aa11.92□□□□□ -0.5
Pcdh20-201ENSMUST00000061628 Tpsg1Q9QUL7 311 aa11.92□□□□□ -0.5
Pcdh20-201ENSMUST00000061628 Rp1P56716 2095 aa11.92□□□□□ -0.5
Pcdh20-201ENSMUST00000061628 Znf664Q4VA44 261 aa11.92□□□□□ -0.5
Pcdh20-201ENSMUST00000061628 Taf15Q8BQ46 557 aaKnown RBP11.91□□□□□ -0.5
Pcdh20-201ENSMUST00000061628 1700001C19RikQ8K168 210 aa11.91□□□□□ -0.5
Pcdh20-201ENSMUST00000061628 Fbxl15Q91W61 300 aa11.91□□□□□ -0.5
Pcdh20-201ENSMUST00000061628 H2al1jA2BFR3 109 aa11.91□□□□□ -0.5
Pcdh20-201ENSMUST00000061628 9430097D07RikQ8BS47 195 aa11.91□□□□□ -0.5
Pcdh20-201ENSMUST00000061628 Ighv1-9A0A0A6YW37 117 aa11.91□□□□□ -0.5
Pcdh20-201ENSMUST00000061628 Tm4sf20Q9CQY8 226 aa11.91□□□□□ -0.5
Pcdh20-201ENSMUST00000061628 SNORCQ9CXL7 121 aa11.91□□□□□ -0.5
Pcdh20-201ENSMUST00000061628 Ssbp2Q9CYZ8 361 aa11.91□□□□□ -0.5
Pcdh20-201ENSMUST00000061628 VsirQ9D659 308 aa11.91□□□□□ -0.5
Pcdh20-201ENSMUST00000061628 Supt4h1bQ9Z199 117 aa11.91□□□□□ -0.5
Pcdh20-201ENSMUST00000061628 Trav8-1A0A075B641 109 aa11.9□□□□□ -0.5
Pcdh20-201ENSMUST00000061628 Fam110aQ8R184 296 aa11.9□□□□□ -0.5
Pcdh20-201ENSMUST00000061628 Dpm3Q9D1Q4 92 aa11.9□□□□□ -0.5
Pcdh20-201ENSMUST00000061628 Ros1Q78DX7 2340 aa11.9□□□□□ -0.5
Pcdh20-201ENSMUST00000061628 Ighv8-6A0A0A6YXA3 118 aa11.9□□□□□ -0.5
Pcdh20-201ENSMUST00000061628 Pfn1P62962 140 aa11.9□□□□□ -0.5
Pcdh20-201ENSMUST00000061628 Gm10384Q3UQ87 92 aa11.9□□□□□ -0.5
Pcdh20-201ENSMUST00000061628 Igkv4-70A0A0B4J1I5 116 aa11.9□□□□□ -0.5
Pcdh20-201ENSMUST00000061628 Igkv6-15A0A140T8M5 115 aa11.9□□□□□ -0.5
Pcdh20-201ENSMUST00000061628 A0A1L1SR50 188 aa11.9□□□□□ -0.5
Pcdh20-201ENSMUST00000061628 SeboxP70368 190 aa11.9□□□□□ -0.5
Pcdh20-201ENSMUST00000061628 OtofQ9ESF1 1997 aa11.9□□□□□ -0.5
Pcdh20-201ENSMUST00000061628 Ighv1-39A0A075B5V5 117 aa11.9□□□□□ -0.51
Pcdh20-201ENSMUST00000061628 P01724 129 aa11.9□□□□□ -0.51
Pcdh20-201ENSMUST00000061628 Tpsab1Q02844 273 aa11.9□□□□□ -0.51
Pcdh20-201ENSMUST00000061628 Mbd6Q3TY92 1003 aa11.9□□□□□ -0.51
Pcdh20-201ENSMUST00000061628 Mrpl32Q9DCI9 187 aaKnown RBP11.9□□□□□ -0.51
Pcdh20-201ENSMUST00000061628 Igkv5-37A0A140T8N4 115 aa11.89□□□□□ -0.51
Pcdh20-201ENSMUST00000061628 Gm5819E9PZ96 154 aa11.89□□□□□ -0.51
Pcdh20-201ENSMUST00000061628 Ccl17F6R5P4 103 aa11.89□□□□□ -0.51
Pcdh20-201ENSMUST00000061628 March3Q8BRX9 218 aa11.89□□□□□ -0.51
Pcdh20-201ENSMUST00000061628 Myod1P10085 318 aa11.89□□□□□ -0.51
Pcdh20-201ENSMUST00000061628 Gm16381A0A1Y7VKT9 73 aa11.89□□□□□ -0.51
Pcdh20-201ENSMUST00000061628 Gtf3c1Q8K284 2101 aa11.89□□□□□ -0.51
Pcdh20-201ENSMUST00000061628 Mcm3apQ9WUU9 1971 aa11.89□□□□□ -0.51
Pcdh20-201ENSMUST00000061628 Trav9-1A0A075B601 112 aa11.89□□□□□ -0.51
Pcdh20-201ENSMUST00000061628 Gm29423A0A087WRM1 55 aa11.89□□□□□ -0.51
Pcdh20-201ENSMUST00000061628 Defa28D3Z1V9 94 aa11.89□□□□□ -0.51
Pcdh20-201ENSMUST00000061628 P01727 129 aa11.89□□□□□ -0.51
Pcdh20-201ENSMUST00000061628 Defa25Q5G864 92 aa11.89□□□□□ -0.51
Pcdh20-201ENSMUST00000061628 Wipf2Q6PEV3 440 aa11.89□□□□□ -0.51
Pcdh20-201ENSMUST00000061628 Dock4P59764 1978 aa11.88□□□□□ -0.51
Pcdh20-201ENSMUST00000061628 Ndufc2Q9CQ54 120 aa11.88□□□□□ -0.51
Pcdh20-201ENSMUST00000061628 Ighv3-4A0A0A6YXF1 117 aa11.88□□□□□ -0.51
Pcdh20-201ENSMUST00000061628 B1ARW8 110 aa11.88□□□□□ -0.51
Retrieved 100 of 22,080 RNA–protein pairs in 58.9 ms