RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 Mzt1Q8BUR9 78 aa8.27□□□□□ -1.09
Ccdc40-201ENSMUST00000035935 Rchy1Q9CR50 261 aa8.27□□□□□ -1.09
Ccdc40-201ENSMUST00000035935 Gm20517G3UVU6 152 aa8.27□□□□□ -1.09
Ccdc40-201ENSMUST00000035935 Sumo2P61957 95 aaKnown RBP8.27□□□□□ -1.09
Ccdc40-201ENSMUST00000035935 Klhdc3Q8VEM9 382 aa8.27□□□□□ -1.09
Ccdc40-201ENSMUST00000035935 Ncor2Q9WU42 2472 aaKnown RBP8.27□□□□□ -1.09
Ccdc40-201ENSMUST00000035935 Cfap46E9Q2C0 2641 aa8.27□□□□□ -1.09
Ccdc40-201ENSMUST00000035935 Ptprz1B9EKR1 2312 aa8.27□□□□□ -1.09
Ccdc40-201ENSMUST00000035935 Trav9-1A0A075B601 112 aa8.27□□□□□ -1.09
Ccdc40-201ENSMUST00000035935 Ang6Q5GAN0 147 aa8.27□□□□□ -1.09
Ccdc40-201ENSMUST00000035935 Olfr433Q7TRV9 314 aa8.27□□□□□ -1.09
Ccdc40-201ENSMUST00000035935 Dopey2Q3UHQ6 2295 aa8.26□□□□□ -1.09
Ccdc40-201ENSMUST00000035935 Gm10775Q3V290 127 aa8.26□□□□□ -1.09
Ccdc40-201ENSMUST00000035935 Lsm4Q9QXA5 137 aaKnown RBP8.26□□□□□ -1.09
Ccdc40-201ENSMUST00000035935 Nckap5E9QAE1 1909 aa8.26□□□□□ -1.09
Ccdc40-201ENSMUST00000035935 Tex54G3UW99 86 aa8.26□□□□□ -1.09
Ccdc40-201ENSMUST00000035935 TcraP01849 138 aa8.26□□□□□ -1.09
Ccdc40-201ENSMUST00000035935 P04942 107 aa8.26□□□□□ -1.09
Ccdc40-201ENSMUST00000035935 Gsx1P31315 261 aa8.26□□□□□ -1.09
Ccdc40-201ENSMUST00000035935 Q08AU9 97 aa8.26□□□□□ -1.09
Ccdc40-201ENSMUST00000035935 Cmc4Q61908 68 aa8.26□□□□□ -1.09
Ccdc40-201ENSMUST00000035935 Gm12169F2Z474 250 aa8.26□□□□□ -1.09
Ccdc40-201ENSMUST00000035935 P01787 123 aa8.26□□□□□ -1.09
Ccdc40-201ENSMUST00000035935 Gm7489Q3UT34 171 aa8.26□□□□□ -1.09
Ccdc40-201ENSMUST00000035935 Minos1Q7TNS2 76 aa8.26□□□□□ -1.09
Ccdc40-201ENSMUST00000035935 Gtsf1lQ9CWD0 151 aa8.26□□□□□ -1.09
Ccdc40-201ENSMUST00000035935 Ighv1-16A0A075B5U1 98 aa8.25□□□□□ -1.09
Ccdc40-201ENSMUST00000035935 Ighv5-8A0A075B676 92 aa8.25□□□□□ -1.09
Ccdc40-201ENSMUST00000035935 Gm5129F6YHA9 99 aa8.25□□□□□ -1.09
Ccdc40-201ENSMUST00000035935 CrxO54751 299 aa8.25□□□□□ -1.09
Ccdc40-201ENSMUST00000035935 Znrd1Q791N7 123 aa8.25□□□□□ -1.09
Ccdc40-201ENSMUST00000035935 MturnQ8CGA4 131 aa8.25□□□□□ -1.09
Ccdc40-201ENSMUST00000035935 Myo9bQ9QY06 2114 aa8.25□□□□□ -1.09
Ccdc40-201ENSMUST00000035935 Ear14F6YUX7 155 aa8.25□□□□□ -1.09
Ccdc40-201ENSMUST00000035935 Spock3Q8BKV0 436 aa8.25□□□□□ -1.09
Ccdc40-201ENSMUST00000035935 Cphx2Q8BX39 182 aa8.25□□□□□ -1.09
Ccdc40-201ENSMUST00000035935 Olfr477Q8VGI6 310 aa8.25□□□□□ -1.09
Ccdc40-201ENSMUST00000035935 CklfQ9DAS1 152 aa8.25□□□□□ -1.09
Ccdc40-201ENSMUST00000035935 Abca7Q91V24 2159 aa8.25□□□□□ -1.09
Ccdc40-201ENSMUST00000035935 Ighv3-4A0A0A6YXF1 117 aa8.25□□□□□ -1.09
Ccdc40-201ENSMUST00000035935 Bcl6bO88282 474 aa8.25□□□□□ -1.09
Ccdc40-201ENSMUST00000035935 TtrP07309 147 aa8.25□□□□□ -1.09
Ccdc40-201ENSMUST00000035935 Mllt11P97783 90 aa8.25□□□□□ -1.09
Ccdc40-201ENSMUST00000035935 Pear1Q8VIK5 1034 aa8.25□□□□□ -1.09
Ccdc40-201ENSMUST00000035935 MsmpB1AWI6 139 aa8.25□□□□□ -1.09
Ccdc40-201ENSMUST00000035935 Tmem8bB1AWJ5 472 aa8.25□□□□□ -1.09
Ccdc40-201ENSMUST00000035935 MycbQ6P8Z1 170 aa8.25□□□□□ -1.09
Ccdc40-201ENSMUST00000035935 Slc25a29Q8BL03 306 aa8.25□□□□□ -1.09
Ccdc40-201ENSMUST00000035935 Tnfrsf13bQ9ET35 249 aa8.25□□□□□ -1.09
Ccdc40-201ENSMUST00000035935 Gm5294J3QP53 216 aa8.24□□□□□ -1.09
Ccdc40-201ENSMUST00000035935 Ccl6P27784 116 aa8.24□□□□□ -1.09
Ccdc40-201ENSMUST00000035935 Olfr745Q7TRL9 328 aa8.24□□□□□ -1.09
Ccdc40-201ENSMUST00000035935 Olfr1195Q8VG21 308 aa8.24□□□□□ -1.09
Ccdc40-201ENSMUST00000035935 Dppa2Q9CWH0 301 aa8.24□□□□□ -1.09
Ccdc40-201ENSMUST00000035935 Tmem95P0DJF3 176 aa8.24□□□□□ -1.09
Ccdc40-201ENSMUST00000035935 PdpnQ62011 172 aa8.24□□□□□ -1.09
Ccdc40-201ENSMUST00000035935 Slc25a48Q8BW66 306 aa8.24□□□□□ -1.09
Ccdc40-201ENSMUST00000035935 Olfr498Q8VEW2 330 aa8.24□□□□□ -1.09
Ccdc40-201ENSMUST00000035935 Lyzl1Q9CPX3 148 aa8.24□□□□□ -1.09
Ccdc40-201ENSMUST00000035935 Gm26938S4R185 226 aa8.24□□□□□ -1.09
Ccdc40-201ENSMUST00000035935 Tet2Q4JK59 1912 aaKnown RBP8.24□□□□□ -1.09
Ccdc40-201ENSMUST00000035935 Abca1P41233 2261 aa8.24□□□□□ -1.09
Ccdc40-201ENSMUST00000035935 P01802 115 aa8.24□□□□□ -1.09
Ccdc40-201ENSMUST00000035935 Edn3P48299 214 aa8.24□□□□□ -1.09
Ccdc40-201ENSMUST00000035935 Olfr317Q5NCD6 327 aa8.24□□□□□ -1.09
Ccdc40-201ENSMUST00000035935 Vmn1r197Q8R265 298 aa8.24□□□□□ -1.09
Ccdc40-201ENSMUST00000035935 3110018I06RikQ9CXS0 120 aa8.24□□□□□ -1.09
Ccdc40-201ENSMUST00000035935 Q9D727 114 aa8.24□□□□□ -1.09
Ccdc40-201ENSMUST00000035935 Ighv1-80A0A075B5Y3 117 aa8.23□□□□□ -1.09
Ccdc40-201ENSMUST00000035935 Tctex1d4Q8CDY7 219 aa8.23□□□□□ -1.09
Ccdc40-201ENSMUST00000035935 Gnb1lQ9EQ15 326 aa8.23□□□□□ -1.09
Ccdc40-201ENSMUST00000035935 Nit2Q9JHW2 276 aa8.23□□□□□ -1.09
Ccdc40-201ENSMUST00000035935 BC106179Q8C9L1 186 aa8.23□□□□□ -1.09
Ccdc40-201ENSMUST00000035935 Olfr1323Q8VF35 309 aa8.23□□□□□ -1.09
Ccdc40-201ENSMUST00000035935 Gm12845A0A0N4SUM5 588 aa8.23□□□□□ -1.09
Ccdc40-201ENSMUST00000035935 1500009C09RikD3YYW9 81 aa8.23□□□□□ -1.09
Ccdc40-201ENSMUST00000035935 Gm6034E9Q101 117 aa8.23□□□□□ -1.09
Ccdc40-201ENSMUST00000035935 Gm19684G3UZ45 117 aa8.23□□□□□ -1.09
Ccdc40-201ENSMUST00000035935 P01789 122 aa8.23□□□□□ -1.09
Ccdc40-201ENSMUST00000035935 P01792 123 aa8.23□□□□□ -1.09
Ccdc40-201ENSMUST00000035935 Defa-rs12P50716 91 aa8.23□□□□□ -1.09
Ccdc40-201ENSMUST00000035935 Gm6871L7N248 545 aa8.23□□□□□ -1.09
Ccdc40-201ENSMUST00000035935 Zfp248Q640N4 576 aa8.23□□□□□ -1.09
Ccdc40-201ENSMUST00000035935 Gm1553Q66VB7 94 aa8.23□□□□□ -1.09
Ccdc40-201ENSMUST00000035935 Dennd4cA6H8H2 1906 aa8.23□□□□□ -1.09
Ccdc40-201ENSMUST00000035935 Tmem30bQ8BHG3 353 aa8.22□□□□□ -1.09
Ccdc40-201ENSMUST00000035935 Gm9944Q8C559 102 aa8.22□□□□□ -1.09
Ccdc40-201ENSMUST00000035935 Dmrtc2Q8CGW9 370 aa8.22□□□□□ -1.09
Ccdc40-201ENSMUST00000035935 CstadQ9D245 104 aa8.22□□□□□ -1.09
Ccdc40-201ENSMUST00000035935 Them7Q9DCP4 223 aa8.22□□□□□ -1.09
Ccdc40-201ENSMUST00000035935 Igkv4-90A0A075B5L3 117 aa8.22□□□□□ -1.09
Ccdc40-201ENSMUST00000035935 Gm45521A0A1B0GRK0 198 aa8.22□□□□□ -1.09
Ccdc40-201ENSMUST00000035935 Gm9970F6ZED4 185 aa8.22□□□□□ -1.09
Ccdc40-201ENSMUST00000035935 P04943 107 aa8.22□□□□□ -1.09
Ccdc40-201ENSMUST00000035935 Isg15Q64339 161 aaKnown RBP8.22□□□□□ -1.09
Ccdc40-201ENSMUST00000035935 Snx22Q8C084 192 aa8.22□□□□□ -1.09
Ccdc40-201ENSMUST00000035935 Dpm3Q9D1Q4 92 aa8.22□□□□□ -1.09
Ccdc40-201ENSMUST00000035935 HelzQ6DFV5 1964 aaKnown RBP8.22□□□□□ -1.09
Ccdc40-201ENSMUST00000035935 Gm10638F6QEG2 257 aa8.22□□□□□ -1.09
Ccdc40-201ENSMUST00000035935 CntfrO88507 372 aa8.22□□□□□ -1.09
Retrieved 100 of 22,080 RNA–protein pairs in 88.5 ms