RNA–Protein interactions for RNA: ENST00000607339.1

UCHL3-205, Transcript of ubiquitin C-terminal hydrolase L3, humanhuman

TSL 2

Gene UCHL3, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UCHL3-205ENST00000607339 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.61□□□□□ -2.312e-8■■■■■ 31.6
UCHL3-205ENST00000607339 LCE6AA0A183 80 aa0.6□□□□□ -2.31
UCHL3-205ENST00000607339 DEFA5Q01523 94 aa0.6□□□□□ -2.31
UCHL3-205ENST00000607339 KRTAP21-1Q3LI58 79 aa0.6□□□□□ -2.31
UCHL3-205ENST00000607339 CD163L1Q9NR16 1453 aa0.6□□□□□ -2.31
UCHL3-205ENST00000607339 DUOX2Q9NRD8 1548 aa0.59□□□□□ -2.31
UCHL3-205ENST00000607339 CNOT1A5YKK6 2376 aaKnown RBP0.59□□□□□ -2.31
UCHL3-205ENST00000607339 COL6A3P12111 3177 aa0.59□□□□□ -2.31
UCHL3-205ENST00000607339 EIF2AK4Q9P2K8 1649 aaKnown RBP0.59□□□□□ -2.32
UCHL3-205ENST00000607339 WNK2Q9Y3S1 2297 aa0.58□□□□□ -2.32
UCHL3-205ENST00000607339 NDUFA4O00483 81 aa0.58□□□□□ -2.32
UCHL3-205ENST00000607339 PLCH1Q4KWH8 1693 aa0.58□□□□□ -2.32
UCHL3-205ENST00000607339 NCOR1O75376 2440 aa0.58□□□□□ -2.32
UCHL3-205ENST00000607339 CSMD3Q7Z407 3707 aa0.57□□□□□ -2.32
UCHL3-205ENST00000607339 H3BVH4 76 aa0.57□□□□□ -2.32
UCHL3-205ENST00000607339 RICTORQ6R327 1708 aa0.57□□□□□ -2.32
UCHL3-205ENST00000607339 LMTK2Q8IWU2 1503 aa0.57□□□□□ -2.32
UCHL3-205ENST00000607339 PTPN13Q12923 2485 aa0.57□□□□□ -2.32
UCHL3-205ENST00000607339 SPTA1P02549 2419 aa0.56□□□□□ -2.32
UCHL3-205ENST00000607339 DDX60LQ5H9U9 1706 aaKnown RBP0.56□□□□□ -2.32
UCHL3-205ENST00000607339 LOC730098B7Z3J9 87 aa0.56□□□□□ -2.32
UCHL3-205ENST00000607339 CICQ96RK0 1608 aaPredicted RBP0.56□□□□□ -2.32
UCHL3-205ENST00000607339 NCOR2Q9Y618 2525 aa0.55□□□□□ -2.32
UCHL3-205ENST00000607339 HFM1A2PYH4 1435 aa0.55□□□□□ -2.32
UCHL3-205ENST00000607339 RALGAPBQ86X10 1494 aa0.54□□□□□ -2.32
UCHL3-205ENST00000607339 WFDC13Q8IUB5 93 aa0.54□□□□□ -2.32
UCHL3-205ENST00000607339 CHD6Q8TD26 2715 aa0.54□□□□□ -2.32
UCHL3-205ENST00000607339 TENM4Q6N022 2769 aa0.54□□□□□ -2.32
UCHL3-205ENST00000607339 VWFP04275 2813 aa0.54□□□□□ -2.32
UCHL3-205ENST00000607339 C4AP0C0L4 1744 aa0.53□□□□□ -2.32
UCHL3-205ENST00000607339 C4BP0C0L5 1744 aa0.53□□□□□ -2.32
UCHL3-205ENST00000607339 CSPG4Q6UVK1 2322 aa0.53□□□□□ -2.32
UCHL3-205ENST00000607339 NDUFA3O95167 84 aa0.53□□□□□ -2.32
UCHL3-205ENST00000607339 THOC2Q8NI27 1593 aaKnown RBP0.53□□□□□ -2.33
UCHL3-205ENST00000607339 PARP4Q9UKK3 1724 aaKnown RBP0.52□□□□□ -2.33
UCHL3-205ENST00000607339 OTOGQ6ZRI0 2925 aa0.52□□□□□ -2.33
UCHL3-205ENST00000607339 C3orf79P0CE67 100 aa0.52□□□□□ -2.33
UCHL3-205ENST00000607339 MUC5BQ9HC84 5762 aaPredicted RBP0.52□□□□□ -2.33
UCHL3-205ENST00000607339 AHNAKQ09666 5890 aaKnown RBP0.52□□□□□ -2.33
UCHL3-205ENST00000607339 MRPL33O75394 65 aaKnown RBP0.51□□□□□ -2.33
UCHL3-205ENST00000607339 WIZO95785 1651 aa0.51□□□□□ -2.33
UCHL3-205ENST00000607339 ATXN8Q156A1 80 aa0.51□□□□□ -2.33
UCHL3-205ENST00000607339 ZC3H13Q5T200 1668 aaKnown RBP0.51□□□□□ -2.33
UCHL3-205ENST00000607339 LELP1Q5T871 98 aa0.51□□□□□ -2.33
UCHL3-205ENST00000607339 PRO3102Q9H379 93 aa0.51□□□□□ -2.33
UCHL3-205ENST00000607339 MACF1Q9UPN3 7388 aaKnown RBP0.5□□□□□ -2.33
UCHL3-205ENST00000607339 CDC42BPGQ6DT37 1551 aa0.5□□□□□ -2.33
UCHL3-205ENST00000607339 DNMBPQ6XZF7 1577 aa0.5□□□□□ -2.33
UCHL3-205ENST00000607339 UBL5Q9BZL1 73 aa0.5□□□□□ -2.33
UCHL3-205ENST00000607339 NHSQ6T4R5 1651 aa0.49□□□□□ -2.33
UCHL3-205ENST00000607339 HIVEP3Q5T1R4 2406 aa0.49□□□□□ -2.33
UCHL3-205ENST00000607339 ABCA2Q9BZC7 2435 aa0.49□□□□□ -2.33
UCHL3-205ENST00000607339 IGSF10Q6WRI0 2623 aa0.49□□□□□ -2.33
UCHL3-205ENST00000607339 TEP1Q99973 2627 aaKnown RBP0.49□□□□□ -2.33
UCHL3-205ENST00000607339 GNG13Q9P2W3 67 aa0.49□□□□□ -2.33
UCHL3-205ENST00000607339 ATRQ13535 2644 aa0.49□□□□□ -2.33
UCHL3-205ENST00000607339 ABCA9Q8IUA7 1624 aa0.48□□□□□ -2.33
UCHL3-205ENST00000607339 ADAMTS12P58397 1594 aa0.48□□□□□ -2.33
UCHL3-205ENST00000607339 ASXL1Q8IXJ9 1541 aa0.48□□□□□ -2.33
UCHL3-205ENST00000607339 UBR4Q5T4S7 5183 aa0.48□□□□□ -2.33
UCHL3-205ENST00000607339 STAB1Q9NY15 2570 aa0.48□□□□□ -2.33
UCHL3-205ENST00000607339 ITSN1Q15811 1721 aa0.47□□□□□ -2.33
UCHL3-205ENST00000607339 MROH1Q8NDA8 1641 aa0.47□□□□□ -2.33
UCHL3-205ENST00000607339 DEFB131BA0A096LNP1 70 aa0.47□□□□□ -2.33
UCHL3-205ENST00000607339 HILPDAQ9Y5L2 63 aa0.47□□□□□ -2.33
UCHL3-205ENST00000607339 EFCAB5A4FU69 1503 aa0.47□□□□□ -2.33
UCHL3-205ENST00000607339 SYNE1Q8NF91 8797 aaKnown RBP0.47□□□□□ -2.33
UCHL3-205ENST00000607339 NRAPQ86VF7 1730 aa0.47□□□□□ -2.33
UCHL3-205ENST00000607339 UBR5O95071 2799 aaPredicted RBP0.46□□□□□ -2.34
UCHL3-205ENST00000607339 DEPDC5O75140 1603 aa0.46□□□□□ -2.34
UCHL3-205ENST00000607339 M0R2T5 61 aa0.46□□□□□ -2.34
UCHL3-205ENST00000607339 LINC00158P58513 81 aa0.46□□□□□ -2.34
UCHL3-205ENST00000607339 ENHOQ6UWT2 76 aa0.46□□□□□ -2.34
UCHL3-205ENST00000607339 TRANK1O15050 2925 aa0.46□□□□□ -2.34
UCHL3-205ENST00000607339 PLXNC1O60486 1568 aa0.45□□□□□ -2.34
UCHL3-205ENST00000607339 KCNQ1DNQ9H478 68 aa0.45□□□□□ -2.34
UCHL3-205ENST00000607339 PCLOQ9Y6V0 5065 aa0.45□□□□□ -2.34
UCHL3-205ENST00000607339 MUC2Q02817 5179 aa0.45□□□□□ -2.34
UCHL3-205ENST00000607339 SONP18583 2426 aaKnown RBP0.45□□□□□ -2.34
UCHL3-205ENST00000607339 MAST4O15021 2626 aa0.45□□□□□ -2.34
UCHL3-205ENST00000607339 DIP2AQ14689 1571 aa0.45□□□□□ -2.34
UCHL3-205ENST00000607339 TJP1Q07157 1748 aa0.44□□□□□ -2.34
UCHL3-205ENST00000607339 RNF17Q9BXT8 1623 aaKnown RBP0.44□□□□□ -2.34
UCHL3-205ENST00000607339 KNL1Q8NG31 2342 aa0.44□□□□□ -2.34
UCHL3-205ENST00000607339 CHD8Q9HCK8 2581 aa0.44□□□□□ -2.34
UCHL3-205ENST00000607339 EP300Q09472 2414 aaPredicted RBP0.43□□□□□ -2.34
UCHL3-205ENST00000607339 BPTFQ12830 3046 aa0.42□□□□□ -2.34
UCHL3-205ENST00000607339 SETD2Q9BYW2 2564 aaPredicted RBP0.42□□□□□ -2.34
UCHL3-205ENST00000607339 CREBBPQ92793 2442 aa0.42□□□□□ -2.34
UCHL3-205ENST00000607339 PHGR1C9JFL3 82 aa0.42□□□□□ -2.34
UCHL3-205ENST00000607339 PRM1P04553 51 aa0.42□□□□□ -2.34
UCHL3-205ENST00000607339 DEFB135Q30KP9 77 aa0.42□□□□□ -2.34
UCHL3-205ENST00000607339 LRP1Q07954 4544 aaKnown RBP0.41□□□□□ -2.34
UCHL3-205ENST00000607339 DSTQ03001 7570 aaKnown RBP0.41□□□□□ -2.34
UCHL3-205ENST00000607339 SMIM31A0A1B0GVY4 71 aa0.41□□□□□ -2.34
UCHL3-205ENST00000607339 ANKHD1Q8IWZ3 2542 aaKnown RBP0.41□□□□□ -2.34
UCHL3-205ENST00000607339 INO80Q9ULG1 1556 aaPredicted RBP0.4□□□□□ -2.34
UCHL3-205ENST00000607339 HRNRQ86YZ3 2850 aaPredicted RBP0.4□□□□□ -2.34
UCHL3-205ENST00000607339 KIAA1109Q2LD37 5005 aa0.4□□□□□ -2.34
UCHL3-205ENST00000607339 SYNE2Q8WXH0 6885 aaKnown RBP0.4□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms