RNA–Protein interactions for RNA: ENST00000559738.1

CTDSPL2-207, Transcript of CTD small phosphatase like 2, humanhuman

TSL 4

Gene CTDSPL2, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-207ENST00000559738 NWD1Q149M9 1564 aa0.35□□□□□ -2.35
CTDSPL2-207ENST00000559738 NESP48681 1621 aa0.35□□□□□ -2.35
CTDSPL2-207ENST00000559738 PTPN13Q12923 2485 aa0.35□□□□□ -2.35
CTDSPL2-207ENST00000559738 PLCH1Q4KWH8 1693 aa0.34□□□□□ -2.35
CTDSPL2-207ENST00000559738 CELSR1Q9NYQ6 3014 aa0.34□□□□□ -2.35
CTDSPL2-207ENST00000559738 ABCA8O94911 1581 aa0.34□□□□□ -2.36
CTDSPL2-207ENST00000559738 C4AP0C0L4 1744 aa0.34□□□□□ -2.36
CTDSPL2-207ENST00000559738 C4BP0C0L5 1744 aa0.34□□□□□ -2.36
CTDSPL2-207ENST00000559738 MYO5CQ9NQX4 1742 aa0.34□□□□□ -2.36
CTDSPL2-207ENST00000559738 CNOT1A5YKK6 2376 aaKnown RBP0.33□□□□□ -2.36
CTDSPL2-207ENST00000559738 RICTORQ6R327 1708 aa0.33□□□□□ -2.36
CTDSPL2-207ENST00000559738 HRNRQ86YZ3 2850 aaPredicted RBP0.33□□□□□ -2.36
CTDSPL2-207ENST00000559738 HIVEP3Q5T1R4 2406 aa0.33□□□□□ -2.36
CTDSPL2-207ENST00000559738 UMAD1C9J7I0 102 aa0.33□□□□□ -2.36
CTDSPL2-207ENST00000559738 SMIM13P0DJ93 91 aa0.33□□□□□ -2.36
CTDSPL2-207ENST00000559738 DEFB121Q5J5C9 76 aa0.33□□□□□ -2.36
CTDSPL2-207ENST00000559738 LELP1Q5T871 98 aa0.33□□□□□ -2.36
CTDSPL2-207ENST00000559738 MAP3K1Q13233 1512 aa0.33□□□□□ -2.36
CTDSPL2-207ENST00000559738 ABCA2Q9BZC7 2435 aa0.33□□□□□ -2.36
CTDSPL2-207ENST00000559738 DDX60LQ5H9U9 1706 aaKnown RBP0.33□□□□□ -2.36
CTDSPL2-207ENST00000559738 PKD1L1Q8TDX9 2849 aa0.32□□□□□ -2.36
CTDSPL2-207ENST00000559738 HUWE1Q7Z6Z7 4374 aaKnown RBP0.32□□□□□ -2.36
CTDSPL2-207ENST00000559738 IFI6P09912 130 aa0.32□□□□□ -2.36
CTDSPL2-207ENST00000559738 CDKN2A-AS1Q9UH64 79 aa0.32□□□□□ -2.36
CTDSPL2-207ENST00000559738 IQGAP3Q86VI3 1631 aa0.31□□□□□ -2.36
CTDSPL2-207ENST00000559738 ANKARQ7Z5J8 1434 aa0.31□□□□□ -2.36
CTDSPL2-207ENST00000559738 KMT2AQ03164 3969 aa0.31□□□□□ -2.36
CTDSPL2-207ENST00000559738 IFI27P40305 119 aaPredicted RBP0.31□□□□□ -2.36
CTDSPL2-207ENST00000559738 C18orf32Q8TCD1 76 aa0.31□□□□□ -2.36
CTDSPL2-207ENST00000559738 FAT2Q9NYQ8 4349 aa0.31□□□□□ -2.36
CTDSPL2-207ENST00000559738 KMT2DO14686 5537 aa0.31□□□□□ -2.36
CTDSPL2-207ENST00000559738 NREPQ16612 68 aa0.3□□□□□ -2.36
CTDSPL2-207ENST00000559738 BSNQ9UPA5 3926 aa0.3□□□□□ -2.36
CTDSPL2-207ENST00000559738 TNXBP22105 4242 aa0.3□□□□□ -2.36
CTDSPL2-207ENST00000559738 WFDC13Q8IUB5 93 aa0.29□□□□□ -2.36
CTDSPL2-207ENST00000559738 PRKDCP78527 4128 aaKnown RBP0.28□□□□□ -2.36
CTDSPL2-207ENST00000559738 NDUFA3O95167 84 aa0.28□□□□□ -2.36
CTDSPL2-207ENST00000559738 PRM1P04553 51 aa0.28□□□□□ -2.36
CTDSPL2-207ENST00000559738 CCDC88BA6NC98 1476 aa0.28□□□□□ -2.37
CTDSPL2-207ENST00000559738 KNL1Q8NG31 2342 aa0.27□□□□□ -2.37
CTDSPL2-207ENST00000559738 PARP4Q9UKK3 1724 aaKnown RBP0.27□□□□□ -2.37
CTDSPL2-207ENST00000559738 MYCBP2O75592 4640 aa0.26□□□□□ -2.37
CTDSPL2-207ENST00000559738 CACNA1AO00555 2505 aa0.26□□□□□ -2.37
CTDSPL2-207ENST00000559738 NDUFA4O00483 81 aa0.26□□□□□ -2.37
CTDSPL2-207ENST00000559738 UGGT2Q9NYU1 1516 aa0.26□□□□□ -2.37
CTDSPL2-207ENST00000559738 ADAMTS12P58397 1594 aa0.26□□□□□ -2.37
CTDSPL2-207ENST00000559738 EIF2AK4Q9P2K8 1649 aaKnown RBP0.26□□□□□ -2.37
CTDSPL2-207ENST00000559738 REV3LO60673 3130 aa0.25□□□□□ -2.37
CTDSPL2-207ENST00000559738 CHD8Q9HCK8 2581 aa0.25□□□□□ -2.37
CTDSPL2-207ENST00000559738 DMBT1Q9UGM3 2413 aaPredicted RBP0.25□□□□□ -2.37
CTDSPL2-207ENST00000559738 WIZO95785 1651 aa0.25□□□□□ -2.37
CTDSPL2-207ENST00000559738 H3BVH4 76 aa0.25□□□□□ -2.37
CTDSPL2-207ENST00000559738 COX6B2Q6YFQ2 88 aa0.25□□□□□ -2.37
CTDSPL2-207ENST00000559738 NRAPQ86VF7 1730 aa0.24□□□□□ -2.37
CTDSPL2-207ENST00000559738 LMTK2Q8IWU2 1503 aa0.24□□□□□ -2.37
CTDSPL2-207ENST00000559738 MAP1BP46821 2468 aaKnown RBP0.24□□□□□ -2.37
CTDSPL2-207ENST00000559738 TJP1Q07157 1748 aa0.24□□□□□ -2.37
CTDSPL2-207ENST00000559738 EP300Q09472 2414 aaPredicted RBP0.23□□□□□ -2.37
CTDSPL2-207ENST00000559738 WNK1Q9H4A3 2382 aa0.23□□□□□ -2.37
CTDSPL2-207ENST00000559738 LCE6AA0A183 80 aa0.23□□□□□ -2.37
CTDSPL2-207ENST00000559738 M0R2T5 61 aa0.23□□□□□ -2.37
CTDSPL2-207ENST00000559738 SMCO4Q9NRQ5 59 aa0.23□□□□□ -2.37
CTDSPL2-207ENST00000559738 ITSN1Q15811 1721 aa0.23□□□□□ -2.37
CTDSPL2-207ENST00000559738 CICQ96RK0 1608 aaPredicted RBP0.23□□□□□ -2.37
CTDSPL2-207ENST00000559738 CD163L1Q9NR16 1453 aa0.22□□□□□ -2.37
CTDSPL2-207ENST00000559738 FLNCQ14315 2725 aa0.22□□□□□ -2.37
CTDSPL2-207ENST00000559738 DEFA5Q01523 94 aa0.22□□□□□ -2.37
CTDSPL2-207ENST00000559738 COL7A1Q02388 2944 aa0.22□□□□□ -2.37
CTDSPL2-207ENST00000559738 ALMS1Q8TCU4 4167 aa0.22□□□□□ -2.37
CTDSPL2-207ENST00000559738 LPAP08519 4548 aa0.21□□□□□ -2.38
CTDSPL2-207ENST00000559738 HMGA1P17096 107 aaKnown RBP0.21□□□□□ -2.38
CTDSPL2-207ENST00000559738 DEFB135Q30KP9 77 aa0.21□□□□□ -2.38
CTDSPL2-207ENST00000559738 PRO3102Q9H379 93 aa0.21□□□□□ -2.38
CTDSPL2-207ENST00000559738 SETXQ7Z333 2677 aaKnown RBP0.21□□□□□ -2.38
CTDSPL2-207ENST00000559738 ANKRD50Q9ULJ7 1429 aa0.21□□□□□ -2.38
CTDSPL2-207ENST00000559738 TRANK1O15050 2925 aa0.2□□□□□ -2.38
CTDSPL2-207ENST00000559738 SPRR2DP22532 72 aa0.2□□□□□ -2.38
CTDSPL2-207ENST00000559738 DCHS2Q6V1P9 2916 aa0.2□□□□□ -2.38
CTDSPL2-207ENST00000559738 CDC42BPGQ6DT37 1551 aa0.19□□□□□ -2.38
CTDSPL2-207ENST00000559738 HMCN2Q8NDA2 5059 aa0.19□□□□□ -2.38
CTDSPL2-207ENST00000559738 DUOX2Q9NRD8 1548 aa0.19□□□□□ -2.38
CTDSPL2-207ENST00000559738 APC2O95996 2303 aa0.19□□□□□ -2.38
CTDSPL2-207ENST00000559738 PDE4DIPQ5VU43 2346 aa0.19□□□□□ -2.38
CTDSPL2-207ENST00000559738 PDCD5O14737 125 aa0.19□□□□□ -2.38
CTDSPL2-207ENST00000559738 LINC00158P58513 81 aa0.19□□□□□ -2.38
CTDSPL2-207ENST00000559738 HILPDAQ9Y5L2 63 aa0.19□□□□□ -2.38
CTDSPL2-207ENST00000559738 ABCA9Q8IUA7 1624 aa0.19□□□□□ -2.38
CTDSPL2-207ENST00000559738 HFM1A2PYH4 1435 aa0.19□□□□□ -2.38
CTDSPL2-207ENST00000559738 PLXNC1O60486 1568 aa0.19□□□□□ -2.38
CTDSPL2-207ENST00000559738 ZC3H13Q5T200 1668 aaKnown RBP0.18□□□□□ -2.38
CTDSPL2-207ENST00000559738 RALGAPBQ86X10 1494 aa0.18□□□□□ -2.38
CTDSPL2-207ENST00000559738 C3orf79P0CE67 100 aa0.18□□□□□ -2.38
CTDSPL2-207ENST00000559738 DEPDC5O75140 1603 aa0.16□□□□□ -2.38
CTDSPL2-207ENST00000559738 HECTD4Q9Y4D8 3996 aa0.16□□□□□ -2.38
CTDSPL2-207ENST00000559738 ENHOQ6UWT2 76 aa0.16□□□□□ -2.38
CTDSPL2-207ENST00000559738 NSD1Q96L73 2696 aaPredicted RBP0.16□□□□□ -2.38
CTDSPL2-207ENST00000559738 RNF17Q9BXT8 1623 aaKnown RBP0.16□□□□□ -2.38
CTDSPL2-207ENST00000559738 DIP2AQ14689 1571 aa0.15□□□□□ -2.38
CTDSPL2-207ENST00000559738 DNMBPQ6XZF7 1577 aa0.15□□□□□ -2.38
CTDSPL2-207ENST00000559738 THOC2Q8NI27 1593 aaKnown RBP0.15□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 109.2 ms