RNA–Protein interactions for RNA: ENST00000559738.1

CTDSPL2-207, Transcript of CTD small phosphatase like 2, humanhuman

TSL 4

Gene CTDSPL2, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-207ENST00000559738 AEBP2Q6ZN18 517 aaPredicted RBP25.75■■□□□ 1.71
CTDSPL2-207ENST00000559738 CHIC1Q5VXU3 224 aa24.77■■□□□ 1.56
CTDSPL2-207ENST00000559738 SENP3Q9H4L4 574 aaPredicted RBP21.91■■□□□ 1.1
CTDSPL2-207ENST00000559738 PHF23Q9BUL5 403 aaPredicted RBP21.75■■□□□ 1.07
CTDSPL2-207ENST00000559738 FOXD1Q16676 465 aa20.38■□□□□ 0.85
CTDSPL2-207ENST00000559738 PLPPR3Q6T4P5 718 aa19.95■□□□□ 0.78
CTDSPL2-207ENST00000559738 PPP6R1Q9UPN7 881 aa19.32■□□□□ 0.68
CTDSPL2-207ENST00000559738 ADRA2BP18089 450 aa19.29■□□□□ 0.68
CTDSPL2-207ENST00000559738 PIAS4Q8N2W9 510 aaPredicted RBP19.16■□□□□ 0.66
CTDSPL2-207ENST00000559738 MSH5O43196 834 aa18.94■□□□□ 0.62
CTDSPL2-207ENST00000559738 POTEDQ86YR6 584 aa18.84■□□□□ 0.61
CTDSPL2-207ENST00000559738 MAPK8IP2Q13387 824 aaPredicted RBP17.61■□□□□ 0.41
CTDSPL2-207ENST00000559738 SCAF1Q9H7N4 1312 aaKnown RBP17.61■□□□□ 0.41
CTDSPL2-207ENST00000559738 PPP4R3CPQ6ZMV5 832 aa17.53■□□□□ 0.4
CTDSPL2-207ENST00000559738 DMRT2Q9Y5R5 561 aa17.43■□□□□ 0.38
CTDSPL2-207ENST00000559738 CNKSR2Q8WXI2 1034 aa17.11■□□□□ 0.33
CTDSPL2-207ENST00000559738 NCBP3Q53F19 620 aaKnown RBP16.95■□□□□ 0.3
CTDSPL2-207ENST00000559738 HOXD11P31277 338 aaPredicted RBP16.89■□□□□ 0.29
CTDSPL2-207ENST00000559738 RNF216Q9NWF9 866 aaPredicted RBP16.87■□□□□ 0.29
CTDSPL2-207ENST00000559738 DCAF8L1A6NGE4 600 aa16.74■□□□□ 0.27
CTDSPL2-207ENST00000559738 NPM3O75607 178 aaKnown RBP16.73■□□□□ 0.27
CTDSPL2-207ENST00000559738 KCNA4P22459 653 aa16.72■□□□□ 0.27
CTDSPL2-207ENST00000559738 DNAJC5BQ9UF47 199 aa16.22■□□□□ 0.19
CTDSPL2-207ENST00000559738 RNF39Q9H2S5 420 aa16.2■□□□□ 0.18
CTDSPL2-207ENST00000559738 CACNB1Q02641 598 aaPredicted RBP16.14■□□□□ 0.17
CTDSPL2-207ENST00000559738 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.14■□□□□ 0.17
CTDSPL2-207ENST00000559738 C1QBPQ07021 282 aaKnown RBP15.97■□□□□ 0.15
CTDSPL2-207ENST00000559738 SLC4A2P04920 1241 aa15.88■□□□□ 0.13
CTDSPL2-207ENST00000559738 SLC4A1APQ9BWU0 796 aaKnown RBP15.84■□□□□ 0.13
CTDSPL2-207ENST00000559738 U3KPZ7 1027 aaPredicted RBP15.83■□□□□ 0.12
CTDSPL2-207ENST00000559738 SPINK5Q9NQ38 1064 aaPredicted RBP15.51■□□□□ 0.07
CTDSPL2-207ENST00000559738 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.48■□□□□ 0.07
CTDSPL2-207ENST00000559738 CAPN15O75808 1086 aa15.48■□□□□ 0.07
CTDSPL2-207ENST00000559738 HNRNPUL2Q1KMD3 747 aaKnown RBP15.48■□□□□ 0.07
CTDSPL2-207ENST00000559738 FOXD4L1Q9NU39 408 aa15.48■□□□□ 0.07
CTDSPL2-207ENST00000559738 MYCNP04198 464 aaPredicted RBP15.46■□□□□ 0.07
CTDSPL2-207ENST00000559738 APLP2Q06481 763 aa15.41■□□□□ 0.06
CTDSPL2-207ENST00000559738 SAMD1Q6SPF0 538 aaPredicted RBP15.41■□□□□ 0.06
CTDSPL2-207ENST00000559738 ZBTB22O15209 634 aa15.38■□□□□ 0.05
CTDSPL2-207ENST00000559738 TRHP20396 242 aaPredicted RBP15.31■□□□□ 0.04
CTDSPL2-207ENST00000559738 DSG3P32926 999 aa15.28■□□□□ 0.04
CTDSPL2-207ENST00000559738 ZNF219Q9P2Y4 722 aaPredicted RBP15.27■□□□□ 0.04
CTDSPL2-207ENST00000559738 EHMT2Q96KQ7 1210 aa15.17■□□□□ 0.02
CTDSPL2-207ENST00000559738 ABCB7O75027 752 aa15.16■□□□□ 0.02
CTDSPL2-207ENST00000559738 CSRNP3Q8WYN3 585 aa15.09■□□□□ 0.01
CTDSPL2-207ENST00000559738 ATF5Q9Y2D1 282 aaPredicted RBP15.08■□□□□ 0
CTDSPL2-207ENST00000559738 POLA2Q14181 598 aa14.96□□□□□ -0.01
CTDSPL2-207ENST00000559738 ATXN8OSP0DMR3 200 aa14.94□□□□□ -0.02
CTDSPL2-207ENST00000559738 POTEHQ6S545 545 aa14.69□□□□□ -0.06
CTDSPL2-207ENST00000559738 ZBTB12Q9Y330 459 aaPredicted RBP14.68□□□□□ -0.06
CTDSPL2-207ENST00000559738 RBM42Q9BTD8 480 aaKnown RBP14.57□□□□□ -0.08
CTDSPL2-207ENST00000559738 OSCARQ8IYS5 282 aa14.5□□□□□ -0.09
CTDSPL2-207ENST00000559738 FBLN2P98095 1184 aa14.47□□□□□ -0.09
CTDSPL2-207ENST00000559738 MKRN4PQ13434 485 aaPredicted RBP14.41□□□□□ -0.1
CTDSPL2-207ENST00000559738 AKT1S1Q96B36 256 aa14.3□□□□□ -0.12
CTDSPL2-207ENST00000559738 SPDYE2BA6NHP3 402 aa14.24□□□□□ -0.13
CTDSPL2-207ENST00000559738 SPDYE6P0CI01 402 aa14.24□□□□□ -0.13
CTDSPL2-207ENST00000559738 SPDYE2Q495Y8 402 aa14.24□□□□□ -0.13
CTDSPL2-207ENST00000559738 REM2Q8IYK8 340 aaPredicted RBP14.18□□□□□ -0.14
CTDSPL2-207ENST00000559738 ZNF692Q9BU19 519 aaPredicted RBP14.14□□□□□ -0.15
CTDSPL2-207ENST00000559738 CHRDL2Q6WN34 429 aa14.13□□□□□ -0.15
CTDSPL2-207ENST00000559738 SSUH2Q9Y2M2 353 aa14.1□□□□□ -0.15
CTDSPL2-207ENST00000559738 PITPNM1O00562 1244 aa14.04□□□□□ -0.16
CTDSPL2-207ENST00000559738 PABPN1Q86U42 306 aaKnown RBP eCLIP13.95□□□□□ -0.18
CTDSPL2-207ENST00000559738 SPDYE1Q8NFV5 336 aaPredicted RBP13.93□□□□□ -0.18
CTDSPL2-207ENST00000559738 CLEC11AQ9Y240 323 aa13.91□□□□□ -0.18
CTDSPL2-207ENST00000559738 SPDYE4A6NLX3 237 aa13.9□□□□□ -0.18
CTDSPL2-207ENST00000559738 PIP4P2Q8N4L2 257 aa13.87□□□□□ -0.19
CTDSPL2-207ENST00000559738 FXR2P51116 673 aaKnown RBP eCLIP13.81□□□□□ -0.2
CTDSPL2-207ENST00000559738 PRR29P0C7W0 189 aa13.7□□□□□ -0.22
CTDSPL2-207ENST00000559738 PRKAR2AP13861 404 aaKnown RBP13.68□□□□□ -0.22
CTDSPL2-207ENST00000559738 FKBP8Q14318 412 aa13.62□□□□□ -0.23
CTDSPL2-207ENST00000559738 CHADLQ6NUI6 762 aa13.61□□□□□ -0.23
CTDSPL2-207ENST00000559738 STAG3Q9UJ98 1225 aa13.61□□□□□ -0.23
CTDSPL2-207ENST00000559738 PROM2Q8N271 834 aa13.59□□□□□ -0.23
CTDSPL2-207ENST00000559738 HAX1O00165 279 aa13.53□□□□□ -0.24
CTDSPL2-207ENST00000559738 SP7Q8TDD2 431 aaPredicted RBP13.52□□□□□ -0.25
CTDSPL2-207ENST00000559738 CREBZFQ9NS37 354 aa13.44□□□□□ -0.26
CTDSPL2-207ENST00000559738 FARP1Q9Y4F1 1045 aaPredicted RBP13.42□□□□□ -0.26
CTDSPL2-207ENST00000559738 EVX2Q03828 476 aa13.38□□□□□ -0.27
CTDSPL2-207ENST00000559738 C19orf67A6NJJ6 358 aa13.37□□□□□ -0.27
CTDSPL2-207ENST00000559738 CD44P16070 742 aaKnown RBP13.27□□□□□ -0.29
CTDSPL2-207ENST00000559738 MNX1P50219 401 aaPredicted RBP13.25□□□□□ -0.29
CTDSPL2-207ENST00000559738 MIER1Q8N108 512 aa13.22□□□□□ -0.29
CTDSPL2-207ENST00000559738 NPM1P06748 294 aaKnown RBP eCLIP13.2□□□□□ -0.3
CTDSPL2-207ENST00000559738 PLEKHG5O94827 1062 aa13.18□□□□□ -0.3
CTDSPL2-207ENST00000559738 PLCD3Q8N3E9 789 aa13.17□□□□□ -0.3
CTDSPL2-207ENST00000559738 FBXO3Q9UK99 471 aa13.16□□□□□ -0.3
CTDSPL2-207ENST00000559738 ZRANB1Q9UGI0 708 aa13.13□□□□□ -0.31
CTDSPL2-207ENST00000559738 PAK3O75914 559 aaPredicted RBP13.1□□□□□ -0.31
CTDSPL2-207ENST00000559738 GABBR2O75899 941 aa13.09□□□□□ -0.31
CTDSPL2-207ENST00000559738 ZNF579Q8NAF0 562 aaKnown RBP13.06□□□□□ -0.32
CTDSPL2-207ENST00000559738 ZBTB47Q9UFB7 747 aaPredicted RBP13.03□□□□□ -0.32
CTDSPL2-207ENST00000559738 VASPP50552 380 aaPredicted RBP13.02□□□□□ -0.33
CTDSPL2-207ENST00000559738 TSPYL2Q9H2G4 693 aaPredicted RBP13.01□□□□□ -0.33
CTDSPL2-207ENST00000559738 PHF12Q96QT6 1004 aa12.99□□□□□ -0.33
CTDSPL2-207ENST00000559738 RASEFQ8IZ41 740 aa12.97□□□□□ -0.33
CTDSPL2-207ENST00000559738 CLCN6P51797 869 aa12.96□□□□□ -0.33
CTDSPL2-207ENST00000559738 NUBP1P53384 320 aa12.92□□□□□ -0.34
CTDSPL2-207ENST00000559738 GALR2O43603 387 aaPredicted RBP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 99.6 ms