RNA–Protein interactions for RNA: ENST00000508282.1

DHFR-204, Transcript of dihydrofolate reductase, humanhuman

TSL 3

Gene DHFR, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-204ENST00000508282 NESP48681 1621 aa0.54□□□□□ -2.32
DHFR-204ENST00000508282 OTOGQ6ZRI0 2925 aa0.54□□□□□ -2.32
DHFR-204ENST00000508282 NREPQ16612 68 aa0.54□□□□□ -2.32
DHFR-204ENST00000508282 UGGT2Q9NYU1 1516 aa0.54□□□□□ -2.32
DHFR-204ENST00000508282 CDKN2A-AS1Q9UH64 79 aa0.53□□□□□ -2.32
DHFR-204ENST00000508282 DSTQ03001 7570 aaKnown RBP0.53□□□□□ -2.32
DHFR-204ENST00000508282 VWFP04275 2813 aa0.53□□□□□ -2.32
DHFR-204ENST00000508282 PLCH1Q4KWH8 1693 aa0.53□□□□□ -2.33
DHFR-204ENST00000508282 CHD6Q8TD26 2715 aa0.52□□□□□ -2.33
DHFR-204ENST00000508282 WNK2Q9Y3S1 2297 aa0.52□□□□□ -2.33
DHFR-204ENST00000508282 CSPG4Q6UVK1 2322 aa0.52□□□□□ -2.33
DHFR-204ENST00000508282 SPTA1P02549 2419 aa0.52□□□□□ -2.33
DHFR-204ENST00000508282 SYNE2Q8WXH0 6885 aaKnown RBP0.51□□□□□ -2.33
DHFR-204ENST00000508282 CACNA1AO00555 2505 aa0.51□□□□□ -2.33
DHFR-204ENST00000508282 PDCD5O14737 125 aa0.51□□□□□ -2.33
DHFR-204ENST00000508282 RICTORQ6R327 1708 aa0.51□□□□□ -2.33
DHFR-204ENST00000508282 COX6B2Q6YFQ2 88 aa0.51□□□□□ -2.33
DHFR-204ENST00000508282 NCOR2Q9Y618 2525 aa0.5□□□□□ -2.33
DHFR-204ENST00000508282 LCE6AA0A183 80 aa0.5□□□□□ -2.33
DHFR-204ENST00000508282 DEFA5Q01523 94 aa0.5□□□□□ -2.33
DHFR-204ENST00000508282 NEBP20929 6669 aa0.5□□□□□ -2.33
DHFR-204ENST00000508282 DDX60LQ5H9U9 1706 aaKnown RBP0.5□□□□□ -2.33
DHFR-204ENST00000508282 CD163L1Q9NR16 1453 aa0.49□□□□□ -2.33
DHFR-204ENST00000508282 ANKRD50Q9ULJ7 1429 aa0.49□□□□□ -2.33
DHFR-204ENST00000508282 TENM4Q6N022 2769 aa0.49□□□□□ -2.33
DHFR-204ENST00000508282 NDUFA4O00483 81 aa0.49□□□□□ -2.33
DHFR-204ENST00000508282 HMGA1P17096 107 aaKnown RBP0.49□□□□□ -2.33
DHFR-204ENST00000508282 PTPN13Q12923 2485 aa0.49□□□□□ -2.33
DHFR-204ENST00000508282 C4AP0C0L4 1744 aa0.49□□□□□ -2.33
DHFR-204ENST00000508282 C4BP0C0L5 1744 aa0.49□□□□□ -2.33
DHFR-204ENST00000508282 EIF2AK4Q9P2K8 1649 aaKnown RBP0.49□□□□□ -2.33
DHFR-204ENST00000508282 FSIP2Q5CZC0 6907 aa0.49□□□□□ -2.33
DHFR-204ENST00000508282 DUOX2Q9NRD8 1548 aa0.48□□□□□ -2.33
DHFR-204ENST00000508282 LOC730098B7Z3J9 87 aa0.48□□□□□ -2.33
DHFR-204ENST00000508282 PHGR1C9JFL3 82 aa0.48□□□□□ -2.33
DHFR-204ENST00000508282 H3BVH4 76 aa0.48□□□□□ -2.33
DHFR-204ENST00000508282 LELP1Q5T871 98 aa0.48□□□□□ -2.33
DHFR-204ENST00000508282 ATRQ13535 2644 aa0.48□□□□□ -2.33
DHFR-204ENST00000508282 WFDC13Q8IUB5 93 aa0.47□□□□□ -2.33
DHFR-204ENST00000508282 UBR5O95071 2799 aaPredicted RBP0.47□□□□□ -2.33
DHFR-204ENST00000508282 LMTK2Q8IWU2 1503 aa0.47□□□□□ -2.33
DHFR-204ENST00000508282 LRP1Q07954 4544 aaKnown RBP0.47□□□□□ -2.33
DHFR-204ENST00000508282 PARP4Q9UKK3 1724 aaKnown RBP0.47□□□□□ -2.33
DHFR-204ENST00000508282 CICQ96RK0 1608 aaPredicted RBP0.46□□□□□ -2.34
DHFR-204ENST00000508282 IGSF10Q6WRI0 2623 aa0.46□□□□□ -2.34
DHFR-204ENST00000508282 NDUFA3O95167 84 aa0.46□□□□□ -2.34
DHFR-204ENST00000508282 MUC5ACP98088 5654 aa0.46□□□□□ -2.34
DHFR-204ENST00000508282 MUC2Q02817 5179 aa0.45□□□□□ -2.34
DHFR-204ENST00000508282 ABCA2Q9BZC7 2435 aa0.45□□□□□ -2.34
DHFR-204ENST00000508282 SYNE1Q8NF91 8797 aaKnown RBP0.45□□□□□ -2.34
DHFR-204ENST00000508282 WIZO95785 1651 aa0.45□□□□□ -2.34
DHFR-204ENST00000508282 BSNQ9UPA5 3926 aa0.45□□□□□ -2.34
DHFR-204ENST00000508282 FAT4Q6V0I7 4981 aa0.44□□□□□ -2.34
DHFR-204ENST00000508282 MAST4O15021 2626 aa0.44□□□□□ -2.34
DHFR-204ENST00000508282 HIVEP3Q5T1R4 2406 aa0.44□□□□□ -2.34
DHFR-204ENST00000508282 ZC3H13Q5T200 1668 aaKnown RBP0.43□□□□□ -2.34
DHFR-204ENST00000508282 PCLOQ9Y6V0 5065 aa0.43□□□□□ -2.34
DHFR-204ENST00000508282 DNMBPQ6XZF7 1577 aa0.43□□□□□ -2.34
DHFR-204ENST00000508282 ITSN1Q15811 1721 aa0.43□□□□□ -2.34
DHFR-204ENST00000508282 KNL1Q8NG31 2342 aa0.43□□□□□ -2.34
DHFR-204ENST00000508282 PKD1L2Q7Z442 2459 aa0.43□□□□□ -2.34
DHFR-204ENST00000508282 HUWE1Q7Z6Z7 4374 aaKnown RBP0.43□□□□□ -2.34
DHFR-204ENST00000508282 FAT2Q9NYQ8 4349 aa0.42□□□□□ -2.34
DHFR-204ENST00000508282 RALGAPBQ86X10 1494 aa0.42□□□□□ -2.34
DHFR-204ENST00000508282 NRAPQ86VF7 1730 aa0.42□□□□□ -2.34
DHFR-204ENST00000508282 KIAA1109Q2LD37 5005 aa0.42□□□□□ -2.34
DHFR-204ENST00000508282 CDC42BPGQ6DT37 1551 aa0.42□□□□□ -2.34
DHFR-204ENST00000508282 ABCA9Q8IUA7 1624 aa0.42□□□□□ -2.34
DHFR-204ENST00000508282 ADAMTS12P58397 1594 aa0.41□□□□□ -2.34
DHFR-204ENST00000508282 HFM1A2PYH4 1435 aa0.41□□□□□ -2.34
DHFR-204ENST00000508282 PKD1L1Q8TDX9 2849 aa0.41□□□□□ -2.34
DHFR-204ENST00000508282 C3orf79P0CE67 100 aa0.41□□□□□ -2.34
DHFR-204ENST00000508282 PRO3102Q9H379 93 aa0.41□□□□□ -2.34
DHFR-204ENST00000508282 BPTFQ12830 3046 aa0.41□□□□□ -2.34
DHFR-204ENST00000508282 TJP1Q07157 1748 aa0.41□□□□□ -2.34
DHFR-204ENST00000508282 STAB1Q9NY15 2570 aa0.41□□□□□ -2.34
DHFR-204ENST00000508282 CHD8Q9HCK8 2581 aa0.4□□□□□ -2.35
DHFR-204ENST00000508282 ATXN8Q156A1 80 aa0.4□□□□□ -2.35
DHFR-204ENST00000508282 HILPDAQ9Y5L2 63 aa0.4□□□□□ -2.35
DHFR-204ENST00000508282 HRNRQ86YZ3 2850 aaPredicted RBP0.4□□□□□ -2.35
DHFR-204ENST00000508282 NHSQ6T4R5 1651 aa0.4□□□□□ -2.35
DHFR-204ENST00000508282 KMT2AQ03164 3969 aa0.39□□□□□ -2.35
DHFR-204ENST00000508282 ASXL1Q8IXJ9 1541 aa0.39□□□□□ -2.35
DHFR-204ENST00000508282 UBL5Q9BZL1 73 aa0.39□□□□□ -2.35
DHFR-204ENST00000508282 GNG13Q9P2W3 67 aa0.39□□□□□ -2.35
DHFR-204ENST00000508282 THOC2Q8NI27 1593 aaKnown RBP0.39□□□□□ -2.35
DHFR-204ENST00000508282 CELSR1Q9NYQ6 3014 aa0.39□□□□□ -2.35
DHFR-204ENST00000508282 MROH1Q8NDA8 1641 aa0.38□□□□□ -2.35
DHFR-204ENST00000508282 TNXBP22105 4242 aa0.38□□□□□ -2.35
DHFR-204ENST00000508282 PRKDCP78527 4128 aaKnown RBP0.38□□□□□ -2.35
DHFR-204ENST00000508282 M0R2T5 61 aa0.38□□□□□ -2.35
DHFR-204ENST00000508282 MRPL33O75394 65 aaKnown RBP0.38□□□□□ -2.35
DHFR-204ENST00000508282 PRM1P04553 51 aa0.38□□□□□ -2.35
DHFR-204ENST00000508282 LINC00158P58513 81 aa0.38□□□□□ -2.35
DHFR-204ENST00000508282 ENHOQ6UWT2 76 aa0.38□□□□□ -2.35
DHFR-204ENST00000508282 EP300Q09472 2414 aaPredicted RBP0.37□□□□□ -2.35
DHFR-204ENST00000508282 PLXNC1O60486 1568 aa0.37□□□□□ -2.35
DHFR-204ENST00000508282 DIP2AQ14689 1571 aa0.37□□□□□ -2.35
DHFR-204ENST00000508282 REV3LO60673 3130 aa0.36□□□□□ -2.35
DHFR-204ENST00000508282 DEPDC5O75140 1603 aa0.36□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 113.8 ms